RNA–Protein interactions for RNA: ENST00000330494.11

CHD3-201, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHD3, Length 7,328 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-201ENST00000330494 CD86P42081 329 aa10.39□□□□□ -0.75
CHD3-201ENST00000330494 MIIPQ5JXC2 388 aa10.39□□□□□ -0.75
CHD3-201ENST00000330494 WDR93Q6P2C0 686 aa10.39□□□□□ -0.75
CHD3-201ENST00000330494 C18orf25Q96B23 403 aaPredicted RBP10.39□□□□□ -0.75
CHD3-201ENST00000330494 FGFBP2Q9BYJ0 223 aa10.39□□□□□ -0.75
CHD3-201ENST00000330494 NXF3Q9H4D5 531 aaKnown RBP10.39□□□□□ -0.75
CHD3-201ENST00000330494 TRPC4Q9UBN4 977 aa10.39□□□□□ -0.75
CHD3-201ENST00000330494 LNPEPQ9UIQ6 1025 aa10.39□□□□□ -0.75
CHD3-201ENST00000330494 ZNF112Q9UJU3 913 aa10.39□□□□□ -0.75
CHD3-201ENST00000330494 PDZK1P1A8MUH7 402 aa10.39□□□□□ -0.75
CHD3-201ENST00000330494 PHGDHO43175 533 aaKnown RBP10.39□□□□□ -0.75
CHD3-201ENST00000330494 ZNF23P17027 643 aa10.39□□□□□ -0.75
CHD3-201ENST00000330494 VCLP18206 1134 aa10.39□□□□□ -0.75
CHD3-201ENST00000330494 KDELR1P24390 212 aa10.39□□□□□ -0.75
CHD3-201ENST00000330494 CD151P48509 253 aa10.39□□□□□ -0.75
CHD3-201ENST00000330494 TBX2Q13207 712 aaPredicted RBP10.39□□□□□ -0.75
CHD3-201ENST00000330494 MAMLD1Q13495 774 aa10.39□□□□□ -0.75
CHD3-201ENST00000330494 MYBPC2Q14324 1141 aa10.39□□□□□ -0.75
CHD3-201ENST00000330494 RNF148Q8N7C7 305 aa10.39□□□□□ -0.75
CHD3-201ENST00000330494 EPS8L1Q8TE68 723 aa10.39□□□□□ -0.75
CHD3-201ENST00000330494 DNAJC9Q8WXX5 260 aa10.39□□□□□ -0.75
CHD3-201ENST00000330494 MYLPFQ96A32 169 aa10.39□□□□□ -0.75
CHD3-201ENST00000330494 DNAJC19Q96DA6 116 aa10.39□□□□□ -0.75
CHD3-201ENST00000330494 SERPINB11Q96P15 392 aa10.39□□□□□ -0.75
CHD3-201ENST00000330494 SNX13Q9Y5W8 968 aa10.39□□□□□ -0.75
CHD3-201ENST00000330494 UBIAD1Q9Y5Z9 338 aa10.39□□□□□ -0.75
CHD3-201ENST00000330494 RTN3O95197 1032 aaPredicted RBP10.39□□□□□ -0.75
CHD3-201ENST00000330494 MARCKSL1P49006 195 aa10.39□□□□□ -0.75
CHD3-201ENST00000330494 CORO7P57737 925 aa10.39□□□□□ -0.75
CHD3-201ENST00000330494 SGCGQ13326 291 aa10.39□□□□□ -0.75
CHD3-201ENST00000330494 PRR23CQ6ZRP0 262 aa10.39□□□□□ -0.75
CHD3-201ENST00000330494 SYTL1Q8IYJ3 562 aa10.39□□□□□ -0.75
CHD3-201ENST00000330494 OR52K1Q8NGK4 314 aa10.39□□□□□ -0.75
CHD3-201ENST00000330494 TMEM237Q96Q45 408 aa10.39□□□□□ -0.75
CHD3-201ENST00000330494 MRPL45Q9BRJ2 306 aaKnown RBP10.39□□□□□ -0.75
CHD3-201ENST00000330494 GSTM1P09488 218 aa10.39□□□□□ -0.75
CHD3-201ENST00000330494 SPATA31C1P0DKV0 1188 aa10.39□□□□□ -0.75
CHD3-201ENST00000330494 PRKAR2AP13861 404 aaKnown RBP10.39□□□□□ -0.75
CHD3-201ENST00000330494 ATP6V1B2P21281 511 aa10.39□□□□□ -0.75
CHD3-201ENST00000330494 GSSP48637 474 aa10.39□□□□□ -0.75
CHD3-201ENST00000330494 RENBPP51606 427 aa10.39□□□□□ -0.75
CHD3-201ENST00000330494 LNX1Q8TBB1 728 aaPredicted RBP10.39□□□□□ -0.75
CHD3-201ENST00000330494 HNRNPLLQ8WVV9 542 aaKnown RBP10.39□□□□□ -0.75
CHD3-201ENST00000330494 CCT7Q99832 543 aa10.39□□□□□ -0.75
CHD3-201ENST00000330494 OR12D3Q9UGF7 316 aa10.39□□□□□ -0.75
CHD3-201ENST00000330494 ANKRD26Q9UPS8 1709 aa10.39□□□□□ -0.75
CHD3-201ENST00000330494 PDE5AO76074 875 aa10.38□□□□□ -0.75
CHD3-201ENST00000330494 MAXP61244 160 aa10.38□□□□□ -0.75
CHD3-201ENST00000330494 AASDHQ4L235 1098 aaPredicted RBP10.38□□□□□ -0.75
CHD3-201ENST00000330494 ALFQ53S48 1182 aa10.38□□□□□ -0.75
CHD3-201ENST00000330494 DNAJC14Q6Y2X3 702 aaPredicted RBP10.38□□□□□ -0.75
CHD3-201ENST00000330494 ZNF786Q8N393 782 aa10.38□□□□□ -0.75
CHD3-201ENST00000330494 RBBP8Q99708 897 aa10.38□□□□□ -0.75
CHD3-201ENST00000330494 TSEN34Q9BSV6 310 aaKnown RBP10.38□□□□□ -0.75
CHD3-201ENST00000330494 POMKQ9H5K3 350 aa10.38□□□□□ -0.75
CHD3-201ENST00000330494 MKL2Q9ULH7 1088 aa10.38□□□□□ -0.75
CHD3-201ENST00000330494 GTF2A1LQ9UNN4 478 aa10.38□□□□□ -0.75
CHD3-201ENST00000330494 TMA7Q9Y2S6 64 aaKnown RBP10.38□□□□□ -0.75
CHD3-201ENST00000330494 YDJCA8MPS7 323 aa10.38□□□□□ -0.75
CHD3-201ENST00000330494 KLRC4O43908 158 aa10.38□□□□□ -0.75
CHD3-201ENST00000330494 SNUPNO95149 360 aaKnown RBP10.38□□□□□ -0.75
CHD3-201ENST00000330494 EIF4BP23588 611 aaKnown RBP10.38□□□□□ -0.75
CHD3-201ENST00000330494 MMP13P45452 471 aa10.38□□□□□ -0.75
CHD3-201ENST00000330494 CAPZA2P47755 286 aa10.38□□□□□ -0.75
CHD3-201ENST00000330494 BCL2L1Q07817 233 aa10.38□□□□□ -0.75
CHD3-201ENST00000330494 CNTN1Q12860 1018 aa10.38□□□□□ -0.75
CHD3-201ENST00000330494 DEFB115Q30KQ5 88 aa10.38□□□□□ -0.75
CHD3-201ENST00000330494 ZNF697Q5TEC3 545 aa10.38□□□□□ -0.75
CHD3-201ENST00000330494 FKBP1CQ5VVH2 108 aa10.38□□□□□ -0.75
CHD3-201ENST00000330494 ELOVL6Q9H5J4 265 aa10.38□□□□□ -0.75
CHD3-201ENST00000330494 MRPL17Q9NRX2 175 aaKnown RBP10.38□□□□□ -0.75
CHD3-201ENST00000330494 UBAP1Q9NZ09 502 aa10.38□□□□□ -0.75
CHD3-201ENST00000330494 ARMCX1Q9P291 453 aa10.38□□□□□ -0.75
CHD3-201ENST00000330494 UBOX5O94941 541 aa10.38□□□□□ -0.75
CHD3-201ENST00000330494 ALBP02768 609 aa10.38□□□□□ -0.75
CHD3-201ENST00000330494 NPR3P17342 541 aa10.38□□□□□ -0.75
CHD3-201ENST00000330494 TSPAN8P19075 237 aa10.38□□□□□ -0.75
CHD3-201ENST00000330494 CTNNB1P35222 781 aa10.38□□□□□ -0.75
CHD3-201ENST00000330494 SERPINB10P48595 397 aa10.38□□□□□ -0.75
CHD3-201ENST00000330494 ELAVL2Q12926 359 aaKnown RBP10.38□□□□□ -0.75
CHD3-201ENST00000330494 MAP2K5Q13163 448 aa10.38□□□□□ -0.75
CHD3-201ENST00000330494 ITGB3BPQ13352 177 aaPredicted RBP10.38□□□□□ -0.75
CHD3-201ENST00000330494 DPYSL3Q14195 570 aa10.38□□□□□ -0.75
CHD3-201ENST00000330494 TMC3Q7Z5M5 1100 aa10.38□□□□□ -0.75
CHD3-201ENST00000330494 POU5F2Q8N7G0 328 aa10.38□□□□□ -0.75
CHD3-201ENST00000330494 C3orf20Q8ND61 904 aa10.38□□□□□ -0.75
CHD3-201ENST00000330494 CCDC3Q9BQI4 270 aa10.38□□□□□ -0.75
CHD3-201ENST00000330494 TMEM134Q9H6X4 195 aa10.38□□□□□ -0.75
CHD3-201ENST00000330494 MID1IP1Q9NPA3 183 aa10.38□□□□□ -0.75
CHD3-201ENST00000330494 UBA2Q9UBT2 640 aaPredicted RBP10.38□□□□□ -0.75
CHD3-201ENST00000330494 RCCD1A6NED2 376 aa10.38□□□□□ -0.75
CHD3-201ENST00000330494 IFRD1O00458 451 aaPredicted RBP10.38□□□□□ -0.75
CHD3-201ENST00000330494 BTN3A1O00481 513 aa10.38□□□□□ -0.75
CHD3-201ENST00000330494 PAEPP09466 180 aa10.38□□□□□ -0.75
CHD3-201ENST00000330494 CDH2P19022 906 aaPredicted RBP10.38□□□□□ -0.75
CHD3-201ENST00000330494 TBL3Q12788 808 aaKnown RBP10.38□□□□□ -0.75
CHD3-201ENST00000330494 CDH17Q12864 832 aa10.38□□□□□ -0.75
CHD3-201ENST00000330494 CRYMQ14894 314 aa10.38□□□□□ -0.75
CHD3-201ENST00000330494 ATP6AP1LQ52LC2 224 aa10.38□□□□□ -0.75
CHD3-201ENST00000330494 SLC51AQ86UW1 340 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms