RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 GMNCA6NCL1 334 aa15.35■□□□□ 0.05
TPM3-205ENST00000328159 RASA4BC9J798 803 aa15.35■□□□□ 0.05
TPM3-205ENST00000328159 F5H423 210 aaPredicted RBP15.35■□□□□ 0.05
TPM3-205ENST00000328159 MTSS1O43312 755 aa15.35■□□□□ 0.05
TPM3-205ENST00000328159 RASA4O43374 803 aa15.35■□□□□ 0.05
TPM3-205ENST00000328159 EFEMP2O95967 443 aa15.35■□□□□ 0.05
TPM3-205ENST00000328159 BRAFP15056 766 aa15.35■□□□□ 0.05
TPM3-205ENST00000328159 PTPN3P26045 913 aa15.35■□□□□ 0.05
TPM3-205ENST00000328159 PSMB4P28070 264 aa15.35■□□□□ 0.05
TPM3-205ENST00000328159 HOXC13P31276 330 aa15.35■□□□□ 0.05
TPM3-205ENST00000328159 RFC2P35250 354 aa15.35■□□□□ 0.05
TPM3-205ENST00000328159 GARSP41250 739 aaKnown RBP15.35■□□□□ 0.05
TPM3-205ENST00000328159 RPL10AP62906 217 aaKnown RBP15.35■□□□□ 0.05
TPM3-205ENST00000328159 PKN2Q16513 984 aaKnown RBP15.35■□□□□ 0.05
TPM3-205ENST00000328159 FOXR1Q6PIV2 292 aa15.35■□□□□ 0.05
TPM3-205ENST00000328159 VWCEQ96DN2 955 aa15.35■□□□□ 0.05
TPM3-205ENST00000328159 TBC1D31Q96DN5 1066 aa15.35■□□□□ 0.05
TPM3-205ENST00000328159 SLC39A13Q96H72 371 aa15.35■□□□□ 0.05
TPM3-205ENST00000328159 FCRL2Q96LA5 508 aaPredicted RBP15.35■□□□□ 0.05
TPM3-205ENST00000328159 CYTH2Q99418 400 aa15.35■□□□□ 0.05
TPM3-205ENST00000328159 PAFAH2Q99487 392 aa15.35■□□□□ 0.05
TPM3-205ENST00000328159 DHRS4Q9BTZ2 278 aa15.35■□□□□ 0.05
TPM3-205ENST00000328159 KCNK9Q9NPC2 374 aa15.35■□□□□ 0.05
TPM3-205ENST00000328159 CLIC5Q9NZA1 410 aa15.35■□□□□ 0.05
TPM3-205ENST00000328159 KLHL8Q9P2G9 620 aaPredicted RBP15.35■□□□□ 0.05
TPM3-205ENST00000328159 ZC3H7BQ9UGR2 993 aaKnown RBP15.35■□□□□ 0.05
TPM3-205ENST00000328159 CDY1Q9Y6F8 540 aa15.35■□□□□ 0.05
TPM3-205ENST00000328159 COL4A6Q14031 1691 aa15.35■□□□□ 0.05
TPM3-205ENST00000328159 LTBP2Q14767 1821 aa15.35■□□□□ 0.05
TPM3-205ENST00000328159 TCRBV9S1A1TA0A576 114 aa15.34■□□□□ 0.05
TPM3-205ENST00000328159 KCNK1O00180 336 aa15.34■□□□□ 0.05
TPM3-205ENST00000328159 NDUFAB1O14561 156 aa15.34■□□□□ 0.05
TPM3-205ENST00000328159 FGF10O15520 208 aaPredicted RBP15.34■□□□□ 0.05
TPM3-205ENST00000328159 MOCS2O96007 188 aaPredicted RBP15.34■□□□□ 0.05
TPM3-205ENST00000328159 CPP00450 1065 aa15.34■□□□□ 0.05
TPM3-205ENST00000328159 MLNP12872 115 aa15.34■□□□□ 0.05
TPM3-205ENST00000328159 GRIA1P42261 906 aa15.34■□□□□ 0.05
TPM3-205ENST00000328159 PSEN1P49768 467 aa15.34■□□□□ 0.05
TPM3-205ENST00000328159 HNRNPH2P55795 449 aaKnown RBP15.34■□□□□ 0.05
TPM3-205ENST00000328159 TBX4P57082 545 aa15.34■□□□□ 0.05
TPM3-205ENST00000328159 COG7P83436 770 aa15.34■□□□□ 0.05
TPM3-205ENST00000328159 TAF10Q12962 218 aa15.34■□□□□ 0.05
TPM3-205ENST00000328159 DUSP4Q13115 394 aa15.34■□□□□ 0.05
TPM3-205ENST00000328159 USP41Q3LFD5 358 aa15.34■□□□□ 0.05
TPM3-205ENST00000328159 PID1Q7Z2X4 250 aa15.34■□□□□ 0.05
TPM3-205ENST00000328159 FBXO22Q8NEZ5 403 aa15.34■□□□□ 0.05
TPM3-205ENST00000328159 DEPDC1BQ8WUY9 529 aa15.34■□□□□ 0.05
TPM3-205ENST00000328159 SIGLEC10Q96LC7 697 aa15.34■□□□□ 0.05
TPM3-205ENST00000328159 CCT8L2Q96SF2 557 aa15.34■□□□□ 0.05
TPM3-205ENST00000328159 VN1R3Q9BXE9 311 aa15.34■□□□□ 0.05
TPM3-205ENST00000328159 TLR8Q9NR97 1041 aaKnown RBP15.34■□□□□ 0.05
TPM3-205ENST00000328159 MTRRQ9UBK8 725 aa15.34■□□□□ 0.05
TPM3-205ENST00000328159 GSTA2P09210 222 aa15.34■□□□□ 0.05
TPM3-205ENST00000328159 CLTBP09497 229 aa15.34■□□□□ 0.05
TPM3-205ENST00000328159 SLC2A3P11169 496 aa15.34■□□□□ 0.05
TPM3-205ENST00000328159 KRT15P19012 456 aa15.34■□□□□ 0.05
TPM3-205ENST00000328159 STX2P32856 288 aa15.34■□□□□ 0.05
TPM3-205ENST00000328159 MSH2P43246 934 aa15.34■□□□□ 0.05
TPM3-205ENST00000328159 NRG1Q02297 640 aaPredicted RBP15.34■□□□□ 0.05
TPM3-205ENST00000328159 EFEMP1Q12805 493 aa15.34■□□□□ 0.05
TPM3-205ENST00000328159 PSMD5Q16401 504 aa15.34■□□□□ 0.05
TPM3-205ENST00000328159 ARTNQ5T4W7 220 aa15.34■□□□□ 0.05
TPM3-205ENST00000328159 SLC8B1Q6J4K2 584 aa15.34■□□□□ 0.05
TPM3-205ENST00000328159 ADGRD1Q6QNK2 874 aa15.34■□□□□ 0.05
TPM3-205ENST00000328159 PDCD7Q8N8D1 485 aaKnown RBP15.34■□□□□ 0.05
TPM3-205ENST00000328159 DCAKDQ8WVC6 231 aa15.34■□□□□ 0.05
TPM3-205ENST00000328159 IGSF21Q96ID5 467 aa15.34■□□□□ 0.05
TPM3-205ENST00000328159 CELF6Q96J87 481 aaKnown RBP15.34■□□□□ 0.05
TPM3-205ENST00000328159 TRABDQ9H4I3 376 aa15.34■□□□□ 0.05
TPM3-205ENST00000328159 CATSPERBQ9H7T0 1116 aa15.34■□□□□ 0.05
TPM3-205ENST00000328159 OLA1Q9NTK5 396 aaKnown RBP15.34■□□□□ 0.05
TPM3-205ENST00000328159 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.34■□□□□ 0.05
TPM3-205ENST00000328159 TTLL3Q9Y4R7 772 aa15.34■□□□□ 0.05
TPM3-205ENST00000328159 BACE2Q9Y5Z0 518 aa15.34■□□□□ 0.05
TPM3-205ENST00000328159 HS3ST4Q9Y661 456 aa15.34■□□□□ 0.05
TPM3-205ENST00000328159 ADAM12O43184 909 aa15.33■□□□□ 0.04
TPM3-205ENST00000328159 FAM107AO95990 144 aa15.33■□□□□ 0.04
TPM3-205ENST00000328159 RASIP1Q5U651 963 aa15.33■□□□□ 0.04
TPM3-205ENST00000328159 LRRC8BQ6P9F7 803 aa15.33■□□□□ 0.04
TPM3-205ENST00000328159 RNF168Q8IYW5 571 aaPredicted RBP15.33■□□□□ 0.04
TPM3-205ENST00000328159 ZNF473Q8WTR7 871 aaKnown RBP15.33■□□□□ 0.04
TPM3-205ENST00000328159 C1orf74Q96LT6 269 aa15.33■□□□□ 0.04
TPM3-205ENST00000328159 EBNA1BP2Q99848 306 aaKnown RBP15.33■□□□□ 0.04
TPM3-205ENST00000328159 PLAC1Q9HBJ0 212 aa15.33■□□□□ 0.04
TPM3-205ENST00000328159 SENP1Q9P0U3 644 aa15.33■□□□□ 0.04
TPM3-205ENST00000328159 TRHDEQ9UKU6 1024 aa15.33■□□□□ 0.04
TPM3-205ENST00000328159 MAD1L1Q9Y6D9 718 aa15.33■□□□□ 0.04
TPM3-205ENST00000328159 WDR27A2RRH5 827 aa15.32■□□□□ 0.04
TPM3-205ENST00000328159 SLC38A8A6NNN8 435 aa15.32■□□□□ 0.04
TPM3-205ENST00000328159 E9PAM4 449 aa15.32■□□□□ 0.04
TPM3-205ENST00000328159 TRDMT1O14717 391 aaKnown RBP15.32■□□□□ 0.04
TPM3-205ENST00000328159 PIAS1O75925 651 aa15.32■□□□□ 0.04
TPM3-205ENST00000328159 CCT5P48643 541 aa15.32■□□□□ 0.04
TPM3-205ENST00000328159 TUBP50607 506 aa15.32■□□□□ 0.04
TPM3-205ENST00000328159 MLLT6P55198 1093 aaPredicted RBP15.32■□□□□ 0.04
TPM3-205ENST00000328159 ZNF33AQ06730 810 aa15.32■□□□□ 0.04
TPM3-205ENST00000328159 ZBTB17Q13105 803 aa15.32■□□□□ 0.04
TPM3-205ENST00000328159 MPP2Q14168 576 aa15.32■□□□□ 0.04
TPM3-205ENST00000328159 TRIP4Q15650 581 aaPredicted RBP15.32■□□□□ 0.04
TPM3-205ENST00000328159 PIK3R6Q5UE93 754 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms