RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 MCF2LO15068 1137 aa10.55□□□□□ -0.72
VIPAS39-201ENST00000327028 MFSD11O43934 449 aa10.55□□□□□ -0.72
VIPAS39-201ENST00000327028 PRAMEF12O95522 483 aa10.55□□□□□ -0.72
VIPAS39-201ENST00000327028 COILP38432 576 aaPredicted RBP10.55□□□□□ -0.72
VIPAS39-201ENST00000327028 VCPP55072 806 aaKnown RBP10.55□□□□□ -0.72
VIPAS39-201ENST00000327028 RABGAP1LQ5R372 815 aa10.55□□□□□ -0.72
VIPAS39-201ENST00000327028 TTC27Q6P3X3 843 aa10.55□□□□□ -0.72
VIPAS39-201ENST00000327028 POTEHQ6S545 545 aa10.55□□□□□ -0.72
VIPAS39-201ENST00000327028 LGI2Q8N0V4 545 aa10.55□□□□□ -0.72
VIPAS39-201ENST00000327028 RTL3Q8N8U3 475 aaKnown RBP10.55□□□□□ -0.72
VIPAS39-201ENST00000327028 MSLNLQ96KJ4 702 aa10.55□□□□□ -0.72
VIPAS39-201ENST00000327028 ZSWIM3Q96MP5 696 aa10.55□□□□□ -0.72
VIPAS39-201ENST00000327028 FAM118BQ9BPY3 351 aa10.55□□□□□ -0.72
VIPAS39-201ENST00000327028 ZYG11BQ9C0D3 744 aa10.55□□□□□ -0.72
VIPAS39-201ENST00000327028 SAE1Q9UBE0 346 aaPredicted RBP10.55□□□□□ -0.72
VIPAS39-201ENST00000327028 PCYOX1Q9UHG3 505 aa10.55□□□□□ -0.72
VIPAS39-201ENST00000327028 CCL26Q9Y258 94 aa10.55□□□□□ -0.72
VIPAS39-201ENST00000327028 RAD54BQ9Y620 910 aa10.55□□□□□ -0.72
VIPAS39-201ENST00000327028 SERPINB6P35237 376 aa10.55□□□□□ -0.72
VIPAS39-201ENST00000327028 GBE1Q04446 702 aa10.55□□□□□ -0.72
VIPAS39-201ENST00000327028 DLX2Q07687 328 aaPredicted RBP10.55□□□□□ -0.72
VIPAS39-201ENST00000327028 ZNF77Q15935 545 aa10.55□□□□□ -0.72
VIPAS39-201ENST00000327028 ATAT1Q5SQI0 421 aa10.55□□□□□ -0.72
VIPAS39-201ENST00000327028 C8orf74Q6P047 294 aa10.55□□□□□ -0.72
VIPAS39-201ENST00000327028 CCDC137Q6PK04 289 aaKnown RBP10.55□□□□□ -0.72
VIPAS39-201ENST00000327028 GET4Q7L5D6 327 aaPredicted RBP10.55□□□□□ -0.72
VIPAS39-201ENST00000327028 NLRP14Q86W24 1093 aa10.55□□□□□ -0.72
VIPAS39-201ENST00000327028 CPXM2Q8N436 756 aa10.55□□□□□ -0.72
VIPAS39-201ENST00000327028 ZSCAN18Q8TBC5 510 aaPredicted RBP10.55□□□□□ -0.72
VIPAS39-201ENST00000327028 IGSF8Q969P0 613 aa10.55□□□□□ -0.72
VIPAS39-201ENST00000327028 RIPOR3Q96MK2 946 aa10.55□□□□□ -0.72
VIPAS39-201ENST00000327028 PRICKLE1Q96MT3 831 aaPredicted RBP10.55□□□□□ -0.72
VIPAS39-201ENST00000327028 FAM161BQ96MY7 647 aa10.55□□□□□ -0.72
VIPAS39-201ENST00000327028 RPRD1AQ96P16 312 aaPredicted RBP10.55□□□□□ -0.72
VIPAS39-201ENST00000327028 OLFM3Q96PB7 478 aa10.55□□□□□ -0.72
VIPAS39-201ENST00000327028 RETREG1Q9H6L5 497 aa10.55□□□□□ -0.72
VIPAS39-201ENST00000327028 TMEM248Q9NWD8 314 aa10.55□□□□□ -0.72
VIPAS39-201ENST00000327028 GDE1Q9NZC3 331 aa10.55□□□□□ -0.72
VIPAS39-201ENST00000327028 DTLQ9NZJ0 730 aa10.55□□□□□ -0.72
VIPAS39-201ENST00000327028 CDH22Q9UJ99 828 aa10.55□□□□□ -0.72
VIPAS39-201ENST00000327028 DNPEPQ9ULA0 475 aa10.55□□□□□ -0.72
VIPAS39-201ENST00000327028 HEY1Q9Y5J3 304 aa10.55□□□□□ -0.72
VIPAS39-201ENST00000327028 GFRA2O00451 464 aa10.54□□□□□ -0.72
VIPAS39-201ENST00000327028 LTBRP36941 435 aa10.54□□□□□ -0.72
VIPAS39-201ENST00000327028 IRAK1P51617 712 aa10.54□□□□□ -0.72
VIPAS39-201ENST00000327028 EIF3EP60228 445 aaKnown RBP10.54□□□□□ -0.72
VIPAS39-201ENST00000327028 SNX1Q13596 522 aa10.54□□□□□ -0.72
VIPAS39-201ENST00000327028 BYSLQ13895 437 aaKnown RBP10.54□□□□□ -0.72
VIPAS39-201ENST00000327028 DHX34Q14147 1143 aaKnown RBP10.54□□□□□ -0.72
VIPAS39-201ENST00000327028 CBX2Q14781 532 aaPredicted RBP10.54□□□□□ -0.72
VIPAS39-201ENST00000327028 OASLQ15646 514 aaKnown RBP10.54□□□□□ -0.72
VIPAS39-201ENST00000327028 GLE1Q53GS7 698 aaKnown RBP10.54□□□□□ -0.72
VIPAS39-201ENST00000327028 TTC39BQ5VTQ0 682 aaPredicted RBP10.54□□□□□ -0.72
VIPAS39-201ENST00000327028 GPR153Q6NV75 609 aa10.54□□□□□ -0.72
VIPAS39-201ENST00000327028 RFWD3Q6PCD5 774 aa10.54□□□□□ -0.72
VIPAS39-201ENST00000327028 BZW1Q7L1Q6 419 aaKnown RBP10.54□□□□□ -0.72
VIPAS39-201ENST00000327028 ARID3BQ8IVW6 561 aaPredicted RBP10.54□□□□□ -0.72
VIPAS39-201ENST00000327028 MICALL1Q8N3F8 863 aa10.54□□□□□ -0.72
VIPAS39-201ENST00000327028 LZTR1Q8N653 840 aa10.54□□□□□ -0.72
VIPAS39-201ENST00000327028 KIAA1958Q8N8K9 716 aa10.54□□□□□ -0.72
VIPAS39-201ENST00000327028 CCDC26Q8TAB7 109 aa10.54□□□□□ -0.72
VIPAS39-201ENST00000327028 FGF13Q92913 245 aa10.54□□□□□ -0.72
VIPAS39-201ENST00000327028 SLCO2A1Q92959 643 aa10.54□□□□□ -0.72
VIPAS39-201ENST00000327028 MYEOVQ96EZ4 313 aa10.54□□□□□ -0.72
VIPAS39-201ENST00000327028 DONSONQ9NYP3 566 aa10.54□□□□□ -0.72
VIPAS39-201ENST00000327028 MPP6Q9NZW5 540 aa10.54□□□□□ -0.72
VIPAS39-201ENST00000327028 MTHFRP42898 656 aa10.54□□□□□ -0.72
VIPAS39-201ENST00000327028 DR1Q01658 176 aa10.54□□□□□ -0.72
VIPAS39-201ENST00000327028 SLC10A2Q12908 348 aaPredicted RBP10.54□□□□□ -0.72
VIPAS39-201ENST00000327028 XRCC4Q13426 336 aa10.54□□□□□ -0.72
VIPAS39-201ENST00000327028 CCDC70Q6NSX1 233 aa10.54□□□□□ -0.72
VIPAS39-201ENST00000327028 BBS7Q8IWZ6 715 aa10.54□□□□□ -0.72
VIPAS39-201ENST00000327028 CELF5Q8N6W0 485 aaKnown RBP10.54□□□□□ -0.72
VIPAS39-201ENST00000327028 NPWQ8N729 165 aa10.54□□□□□ -0.72
VIPAS39-201ENST00000327028 RIN3Q8TB24 985 aa10.54□□□□□ -0.72
VIPAS39-201ENST00000327028 GRK7Q8WTQ7 553 aa10.54□□□□□ -0.72
VIPAS39-201ENST00000327028 UBXN4Q92575 508 aa10.54□□□□□ -0.72
VIPAS39-201ENST00000327028 KLC2Q9H0B6 622 aa10.54□□□□□ -0.72
VIPAS39-201ENST00000327028 DRG1Q9Y295 367 aaKnown RBP10.54□□□□□ -0.72
VIPAS39-201ENST00000327028 KIF26AQ9ULI4 1882 aaPredicted RBP10.54□□□□□ -0.72
VIPAS39-201ENST00000327028 RAD51CO43502 376 aa10.54□□□□□ -0.72
VIPAS39-201ENST00000327028 ITGAVP06756 1048 aa10.54□□□□□ -0.72
VIPAS39-201ENST00000327028 MAPKAPK2P49137 400 aa10.54□□□□□ -0.72
VIPAS39-201ENST00000327028 LMNB2Q03252 620 aa10.54□□□□□ -0.72
VIPAS39-201ENST00000327028 ALFQ53S48 1182 aa10.54□□□□□ -0.72
VIPAS39-201ENST00000327028 FAM78AQ5JUQ0 283 aa10.54□□□□□ -0.72
VIPAS39-201ENST00000327028 EP400NLQ6ZTU2 488 aa10.54□□□□□ -0.72
VIPAS39-201ENST00000327028 CHST9Q7L1S5 443 aa10.54□□□□□ -0.72
VIPAS39-201ENST00000327028 MAATS1Q7Z4T9 603 aa10.54□□□□□ -0.72
VIPAS39-201ENST00000327028 CDKL3Q8IVW4 592 aaPredicted RBP10.54□□□□□ -0.72
VIPAS39-201ENST00000327028 CCDC105Q8IYK2 499 aa10.54□□□□□ -0.72
VIPAS39-201ENST00000327028 HJURPQ8NCD3 748 aaPredicted RBP10.54□□□□□ -0.72
VIPAS39-201ENST00000327028 TTC16Q8NEE8 873 aa10.54□□□□□ -0.72
VIPAS39-201ENST00000327028 ATL2Q8NHH9 583 aa10.54□□□□□ -0.72
VIPAS39-201ENST00000327028 ASB16Q96NS5 453 aa10.54□□□□□ -0.72
VIPAS39-201ENST00000327028 QKIQ96PU8 341 aaKnown RBP eCLIP10.54□□□□□ -0.72
VIPAS39-201ENST00000327028 TRPV4Q9HBA0 871 aa10.54□□□□□ -0.72
VIPAS39-201ENST00000327028 ZNF212Q9UDV6 495 aa10.54□□□□□ -0.72
VIPAS39-201ENST00000327028 AMACRQ9UHK6 382 aa10.54□□□□□ -0.72
VIPAS39-201ENST00000327028 CDH7Q9ULB5 785 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms