RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 ENTPD5O75356 428 aa8.06□□□□□ -1.12
CIITA-201ENST00000324288 HLA-DQA2P01906 255 aa8.06□□□□□ -1.12
CIITA-201ENST00000324288 SLC11A2P49281 568 aa8.06□□□□□ -1.12
CIITA-201ENST00000324288 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.06□□□□□ -1.12
CIITA-201ENST00000324288 NAPEPLDQ6IQ20 393 aa8.06□□□□□ -1.12
CIITA-201ENST00000324288 LRRC20Q8TCA0 184 aa8.06□□□□□ -1.12
CIITA-201ENST00000324288 FAR2Q96K12 515 aa8.06□□□□□ -1.12
CIITA-201ENST00000324288 ERAP1Q9NZ08 941 aa8.06□□□□□ -1.12
CIITA-201ENST00000324288 TBX20Q9UMR3 447 aa8.06□□□□□ -1.12
CIITA-201ENST00000324288 NAALADL1Q9UQQ1 740 aa8.06□□□□□ -1.12
CIITA-201ENST00000324288 TTC37Q6PGP7 1564 aa8.06□□□□□ -1.12
CIITA-201ENST00000324288 UMPSP11172 480 aa8.06□□□□□ -1.12
CIITA-201ENST00000324288 CUL2Q13617 745 aa8.06□□□□□ -1.12
CIITA-201ENST00000324288 FAM43BQ6ZT52 329 aaPredicted RBP8.06□□□□□ -1.12
CIITA-201ENST00000324288 FAM172AQ8WUF8 416 aa8.06□□□□□ -1.12
CIITA-201ENST00000324288 BTBD9Q96Q07 612 aa8.06□□□□□ -1.12
CIITA-201ENST00000324288 RHOBTB2Q9BYZ6 727 aa8.06□□□□□ -1.12
CIITA-201ENST00000324288 RHBGQ9H310 441 aa8.06□□□□□ -1.12
CIITA-201ENST00000324288 PRDM4Q9UKN5 801 aa8.06□□□□□ -1.12
CIITA-201ENST00000324288 CNTNAP2Q9UHC6 1331 aa8.06□□□□□ -1.12
CIITA-201ENST00000324288 IGSF9BQ9UPX0 1349 aa8.06□□□□□ -1.12
CIITA-201ENST00000324288 MOXD2PA6NHM9 499 aa8.06□□□□□ -1.12
CIITA-201ENST00000324288 GARTP22102 1010 aa8.06□□□□□ -1.12
CIITA-201ENST00000324288 TCF7P36402 384 aaPredicted RBP8.06□□□□□ -1.12
CIITA-201ENST00000324288 FOLH1Q04609 750 aa8.06□□□□□ -1.12
CIITA-201ENST00000324288 NFIXQ14938 502 aa8.06□□□□□ -1.12
CIITA-201ENST00000324288 CBWD2Q8IUF1 395 aa8.06□□□□□ -1.12
CIITA-201ENST00000324288 CAMKK2Q96RR4 588 aa8.06□□□□□ -1.12
CIITA-201ENST00000324288 COMMD9Q9P000 198 aa8.06□□□□□ -1.12
CIITA-201ENST00000324288 CYB561D2O14569 222 aa8.06□□□□□ -1.12
CIITA-201ENST00000324288 OR6B1O95007 311 aa8.06□□□□□ -1.12
CIITA-201ENST00000324288 RGS2P41220 211 aa8.06□□□□□ -1.12
CIITA-201ENST00000324288 EFL1Q7Z2Z2 1120 aaKnown RBP8.06□□□□□ -1.12
CIITA-201ENST00000324288 ZNF438Q7Z4V0 828 aa8.06□□□□□ -1.12
CIITA-201ENST00000324288 ADGRF2Q8IZF7 708 aa8.06□□□□□ -1.12
CIITA-201ENST00000324288 OSGEPQ9NPF4 335 aa8.06□□□□□ -1.12
CIITA-201ENST00000324288 GGA3Q9NZ52 723 aa8.06□□□□□ -1.12
CIITA-201ENST00000324288 TFECO14948 347 aaPredicted RBP8.06□□□□□ -1.12
CIITA-201ENST00000324288 ACLYP53396 1101 aa8.06□□□□□ -1.12
CIITA-201ENST00000324288 EDRF1Q3B7T1 1238 aa8.06□□□□□ -1.12
CIITA-201ENST00000324288 CCDC153Q494R4 210 aa8.06□□□□□ -1.12
CIITA-201ENST00000324288 UGT3A1Q6NUS8 523 aa8.06□□□□□ -1.12
CIITA-201ENST00000324288 CDC42EP5Q6NZY7 148 aa8.06□□□□□ -1.12
CIITA-201ENST00000324288 WDR93Q6P2C0 686 aa8.06□□□□□ -1.12
CIITA-201ENST00000324288 EDEM1Q92611 657 aa8.06□□□□□ -1.12
CIITA-201ENST00000324288 CADP27708 2225 aa8.05□□□□□ -1.12
CIITA-201ENST00000324288 TRIM3O75382 744 aaPredicted RBP8.05□□□□□ -1.12
CIITA-201ENST00000324288 PECAM1P16284 738 aaPredicted RBP8.05□□□□□ -1.12
CIITA-201ENST00000324288 SCNN1BP51168 640 aa8.05□□□□□ -1.12
CIITA-201ENST00000324288 MTSS1LQ765P7 747 aa8.05□□□□□ -1.12
CIITA-201ENST00000324288 AKAP14Q86UN6 197 aa8.05□□□□□ -1.12
CIITA-201ENST00000324288 SVOPQ8N4V2 548 aa8.05□□□□□ -1.12
CIITA-201ENST00000324288 ATP6V0D2Q8N8Y2 350 aa8.05□□□□□ -1.12
CIITA-201ENST00000324288 MIEF1Q9NQG6 463 aa8.05□□□□□ -1.12
CIITA-201ENST00000324288 SMPD4Q9NXE4 827 aa8.05□□□□□ -1.12
CIITA-201ENST00000324288 PNMA8CA0A1B0GUJ8 204 aa8.05□□□□□ -1.12
CIITA-201ENST00000324288 ANXA9O76027 345 aa8.05□□□□□ -1.12
CIITA-201ENST00000324288 GPR1P46091 355 aa8.05□□□□□ -1.12
CIITA-201ENST00000324288 CLCN3P51790 818 aa8.05□□□□□ -1.12
CIITA-201ENST00000324288 KPNA1P52294 538 aaPredicted RBP8.05□□□□□ -1.12
CIITA-201ENST00000324288 NEDD1Q8NHV4 660 aa8.05□□□□□ -1.12
CIITA-201ENST00000324288 ANKRD27Q96NW4 1050 aa8.05□□□□□ -1.12
CIITA-201ENST00000324288 OSBPL6Q9BZF3 934 aa8.05□□□□□ -1.12
CIITA-201ENST00000324288 ACTR8Q9H981 624 aa8.05□□□□□ -1.12
CIITA-201ENST00000324288 MSH4O15457 936 aa8.05□□□□□ -1.12
CIITA-201ENST00000324288 NPY2RP49146 381 aa8.05□□□□□ -1.12
CIITA-201ENST00000324288 TTLL9Q3SXZ7 439 aa8.05□□□□□ -1.12
CIITA-201ENST00000324288 ZNF554Q86TJ5 538 aa8.05□□□□□ -1.12
CIITA-201ENST00000324288 NMRK1Q9NWW6 199 aa8.05□□□□□ -1.12
CIITA-201ENST00000324288 CDC42BPBQ9Y5S2 1711 aa8.05□□□□□ -1.12
CIITA-201ENST00000324288 PSMD12O00232 456 aaPredicted RBP8.05□□□□□ -1.12
CIITA-201ENST00000324288 SP100P23497 879 aaPredicted RBP8.05□□□□□ -1.12
CIITA-201ENST00000324288 PTGS2P35354 604 aa8.05□□□□□ -1.12
CIITA-201ENST00000324288 BOP1Q14137 746 aaKnown RBP8.05□□□□□ -1.12
CIITA-201ENST00000324288 SLC47A2Q86VL8 602 aa8.05□□□□□ -1.12
CIITA-201ENST00000324288 GPRC5AQ8NFJ5 357 aa8.05□□□□□ -1.12
CIITA-201ENST00000324288 CERKQ8TCT0 537 aa8.05□□□□□ -1.12
CIITA-201ENST00000324288 FAM129BQ96TA1 746 aa8.05□□□□□ -1.12
CIITA-201ENST00000324288 PDCD10Q9BUL8 212 aa8.05□□□□□ -1.12
CIITA-201ENST00000324288 PHF20Q9BVI0 1012 aa8.05□□□□□ -1.12
CIITA-201ENST00000324288 PRKAG3Q9UGI9 489 aa8.05□□□□□ -1.12
CIITA-201ENST00000324288 B3GAT3O94766 335 aa8.05□□□□□ -1.12
CIITA-201ENST00000324288 GEMP55040 296 aa8.05□□□□□ -1.12
CIITA-201ENST00000324288 ADAM17P78536 824 aa8.05□□□□□ -1.12
CIITA-201ENST00000324288 IL18R1Q13478 541 aa8.05□□□□□ -1.12
CIITA-201ENST00000324288 EIF3MQ7L2H7 374 aaKnown RBP8.05□□□□□ -1.12
CIITA-201ENST00000324288 PODNQ7Z5L7 613 aa8.05□□□□□ -1.12
CIITA-201ENST00000324288 FAM131BQ86XD5 332 aa8.05□□□□□ -1.12
CIITA-201ENST00000324288 CROCCP3Q8IVE0 287 aa8.05□□□□□ -1.12
CIITA-201ENST00000324288 ADAM32Q8TC27 787 aa8.05□□□□□ -1.12
CIITA-201ENST00000324288 LRRN4Q8WUT4 740 aa8.05□□□□□ -1.12
CIITA-201ENST00000324288 ELMO1Q92556 727 aa8.05□□□□□ -1.12
CIITA-201ENST00000324288 CENPIQ92674 756 aaPredicted RBP8.05□□□□□ -1.12
CIITA-201ENST00000324288 RNPEPL1Q9HAU8 725 aa8.05□□□□□ -1.12
CIITA-201ENST00000324288 PDGFCQ9NRA1 345 aa8.05□□□□□ -1.12
CIITA-201ENST00000324288 ZNF224Q9NZL3 707 aa8.05□□□□□ -1.12
CIITA-201ENST00000324288 CCL15-CCL14A0A0B4J2E2 113 aa8.05□□□□□ -1.12
CIITA-201ENST00000324288 SLC12A8A0AV02 714 aa8.05□□□□□ -1.12
CIITA-201ENST00000324288 CKBP12277 381 aa8.05□□□□□ -1.12
CIITA-201ENST00000324288 ETS1P14921 441 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms