RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 RPL34P49207 117 aaKnown RBP14.77□□□□□ -0.05
RPP40-201ENST00000319533 LRRC63Q05C16 580 aa14.77□□□□□ -0.05
RPP40-201ENST00000319533 CAMK2BQ13554 666 aa14.77□□□□□ -0.05
RPP40-201ENST00000319533 SMAD1Q15797 465 aaKnown RBP14.77□□□□□ -0.05
RPP40-201ENST00000319533 KCNT1Q5JUK3 1230 aa14.77□□□□□ -0.05
RPP40-201ENST00000319533 NADSYN1Q6IA69 706 aa14.77□□□□□ -0.05
RPP40-201ENST00000319533 RFWD3Q6PCD5 774 aa14.77□□□□□ -0.05
RPP40-201ENST00000319533 ELOA2Q8IYF1 753 aaPredicted RBP14.77□□□□□ -0.05
RPP40-201ENST00000319533 GALNT15Q8N3T1 639 aa14.77□□□□□ -0.05
RPP40-201ENST00000319533 MDM1Q8TC05 714 aa14.77□□□□□ -0.05
RPP40-201ENST00000319533 MRGPRX3Q96LB0 322 aa14.77□□□□□ -0.05
RPP40-201ENST00000319533 HSFY1Q96LI6 401 aa14.77□□□□□ -0.05
RPP40-201ENST00000319533 PABPC3Q9H361 631 aaKnown RBP14.77□□□□□ -0.05
RPP40-201ENST00000319533 SCUBE2Q9NQ36 999 aa14.77□□□□□ -0.05
RPP40-201ENST00000319533 INTS6Q9UL03 887 aaKnown RBP14.77□□□□□ -0.05
RPP40-201ENST00000319533 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.77□□□□□ -0.05
RPP40-201ENST00000319533 TMEM131Q92545 1883 aa14.77□□□□□ -0.05
RPP40-201ENST00000319533 H0Y8X5 98 aa14.76□□□□□ -0.05
RPP40-201ENST00000319533 RNF225M0QZC1 329 aaPredicted RBP14.76□□□□□ -0.05
RPP40-201ENST00000319533 VILLO15195 856 aa14.76□□□□□ -0.05
RPP40-201ENST00000319533 GADD45BO75293 160 aaPredicted RBP14.76□□□□□ -0.05
RPP40-201ENST00000319533 FBXO21O94952 628 aa14.76□□□□□ -0.05
RPP40-201ENST00000319533 FSBPO95073 299 aa14.76□□□□□ -0.05
RPP40-201ENST00000319533 LTFP02788 710 aa14.76□□□□□ -0.05
RPP40-201ENST00000319533 FYNP06241 537 aa14.76□□□□□ -0.05
RPP40-201ENST00000319533 RGS7P49802 495 aa14.76□□□□□ -0.05
RPP40-201ENST00000319533 CCT8P50990 548 aa14.76□□□□□ -0.05
RPP40-201ENST00000319533 TBX4P57082 545 aa14.76□□□□□ -0.05
RPP40-201ENST00000319533 UBE2HP62256 183 aa14.76□□□□□ -0.05
RPP40-201ENST00000319533 LRMPQ12912 555 aa14.76□□□□□ -0.05
RPP40-201ENST00000319533 NNTQ13423 1086 aa14.76□□□□□ -0.05
RPP40-201ENST00000319533 STIM1Q13586 685 aa14.76□□□□□ -0.05
RPP40-201ENST00000319533 STILQ15468 1287 aa14.76□□□□□ -0.05
RPP40-201ENST00000319533 HNRNPA1L2Q32P51 320 aaKnown RBP14.76□□□□□ -0.05
RPP40-201ENST00000319533 KIAA0895LQ68EN5 471 aa14.76□□□□□ -0.05
RPP40-201ENST00000319533 TMEM270Q6UE05 265 aa14.76□□□□□ -0.05
RPP40-201ENST00000319533 PDZD3Q86UT5 571 aa14.76□□□□□ -0.05
RPP40-201ENST00000319533 HJURPQ8NCD3 748 aaPredicted RBP14.76□□□□□ -0.05
RPP40-201ENST00000319533 MYEOVQ96EZ4 313 aa14.76□□□□□ -0.05
RPP40-201ENST00000319533 SLC39A13Q96H72 371 aa14.76□□□□□ -0.05
RPP40-201ENST00000319533 FCRL2Q96LA5 508 aaPredicted RBP14.76□□□□□ -0.05
RPP40-201ENST00000319533 PRICKLE1Q96MT3 831 aaPredicted RBP14.76□□□□□ -0.05
RPP40-201ENST00000319533 DDX50Q9BQ39 737 aaKnown RBP14.76□□□□□ -0.05
RPP40-201ENST00000319533 METTL14Q9HCE5 456 aaKnown RBP14.76□□□□□ -0.05
RPP40-201ENST00000319533 ADAMTS1Q9UHI8 967 aa14.76□□□□□ -0.05
RPP40-201ENST00000319533 NCKAP1Q9Y2A7 1128 aa14.76□□□□□ -0.05
RPP40-201ENST00000319533 LOC400499M0QZD8 3231 aa14.76□□□□□ -0.05
RPP40-201ENST00000319533 A0A1W2PPC4 97 aa14.75□□□□□ -0.05
RPP40-201ENST00000319533 KCNK3O14649 394 aa14.75□□□□□ -0.05
RPP40-201ENST00000319533 SIN3BO75182 1162 aa14.75□□□□□ -0.05
RPP40-201ENST00000319533 CSKP41240 450 aa14.75□□□□□ -0.05
RPP40-201ENST00000319533 FMO5P49326 533 aa14.75□□□□□ -0.05
RPP40-201ENST00000319533 GALCP54803 685 aa14.75□□□□□ -0.05
RPP40-201ENST00000319533 RACK1P63244 317 aaKnown RBP14.75□□□□□ -0.05
RPP40-201ENST00000319533 SFSWAPQ12872 951 aaKnown RBP14.75□□□□□ -0.05
RPP40-201ENST00000319533 COL28A1Q2UY09 1125 aa14.75□□□□□ -0.05
RPP40-201ENST00000319533 C19orf48Q6RUI8 117 aa14.75□□□□□ -0.05
RPP40-201ENST00000319533 BEND5Q7L4P6 421 aa14.75□□□□□ -0.05
RPP40-201ENST00000319533 MFN1Q8IWA4 741 aa14.75□□□□□ -0.05
RPP40-201ENST00000319533 LMO3Q8TAP4 145 aa14.75□□□□□ -0.05
RPP40-201ENST00000319533 CLEC4CQ8WTT0 213 aa14.75□□□□□ -0.05
RPP40-201ENST00000319533 ERCC4Q92889 916 aaPredicted RBP14.75□□□□□ -0.05
RPP40-201ENST00000319533 NT5C1BQ96P26 610 aa14.75□□□□□ -0.05
RPP40-201ENST00000319533 MTG2Q9H4K7 406 aa14.75□□□□□ -0.05
RPP40-201ENST00000319533 FBXL12Q9NXK8 326 aa14.75□□□□□ -0.05
RPP40-201ENST00000319533 TLR6Q9Y2C9 796 aa14.75□□□□□ -0.05
RPP40-201ENST00000319533 RAXQ9Y2V3 346 aa14.75□□□□□ -0.05
RPP40-201ENST00000319533 COL5A1P20908 1838 aaPredicted RBP14.75□□□□□ -0.05
RPP40-201ENST00000319533 ITIH6Q6UXX5 1313 aa14.74□□□□□ -0.05
RPP40-201ENST00000319533 A0A1B0GTQ1 180 aa14.74□□□□□ -0.05
RPP40-201ENST00000319533 TARSL2A2RTX5 802 aaKnown RBP14.74□□□□□ -0.05
RPP40-201ENST00000319533 TRIM49BA6NDI0 452 aa14.74□□□□□ -0.05
RPP40-201ENST00000319533 TRABD2BA6NFA1 517 aa14.74□□□□□ -0.05
RPP40-201ENST00000319533 E9PAM4 449 aa14.74□□□□□ -0.05
RPP40-201ENST00000319533 PSMA7O14818 248 aa14.74□□□□□ -0.05
RPP40-201ENST00000319533 P4HA2O15460 535 aa14.74□□□□□ -0.05
RPP40-201ENST00000319533 SRPRAP08240 638 aaKnown RBP14.74□□□□□ -0.05
RPP40-201ENST00000319533 PPP1R2P41236 205 aa14.74□□□□□ -0.05
RPP40-201ENST00000319533 ST8SIA6P61647 398 aa14.74□□□□□ -0.05
RPP40-201ENST00000319533 INAVAQ3KP66 663 aa14.74□□□□□ -0.05
RPP40-201ENST00000319533 SOWAHCQ53LP3 525 aaPredicted RBP14.74□□□□□ -0.05
RPP40-201ENST00000319533 MS4A13Q5J8X5 152 aa14.74□□□□□ -0.05
RPP40-201ENST00000319533 C9orf64Q5T6V5 341 aa14.74□□□□□ -0.05
RPP40-201ENST00000319533 LAYNQ6UX15 382 aa14.74□□□□□ -0.05
RPP40-201ENST00000319533 DQX1Q8TE96 717 aaKnown RBP14.74□□□□□ -0.05
RPP40-201ENST00000319533 KAT5Q92993 513 aa14.74□□□□□ -0.05
RPP40-201ENST00000319533 CEP63Q96MT8 703 aa14.74□□□□□ -0.05
RPP40-201ENST00000319533 SERPINB11Q96P15 392 aa14.74□□□□□ -0.05
RPP40-201ENST00000319533 EBF2Q9HAK2 575 aa14.74□□□□□ -0.05
RPP40-201ENST00000319533 SERGEFQ9UGK8 458 aa14.74□□□□□ -0.05
RPP40-201ENST00000319533 FZD4Q9ULV1 537 aa14.74□□□□□ -0.05
RPP40-201ENST00000319533 PCDHB4Q9Y5E5 795 aa14.74□□□□□ -0.05
RPP40-201ENST00000319533 URB1O60287 2271 aaKnown RBP14.74□□□□□ -0.05
RPP40-201ENST00000319533 GOLGA4Q13439 2230 aaKnown RBP14.74□□□□□ -0.05
RPP40-201ENST00000319533 M0QYV0 167 aa14.73□□□□□ -0.05
RPP40-201ENST00000319533 PIK3R2O00459 728 aa14.73□□□□□ -0.05
RPP40-201ENST00000319533 RNASEH1O60930 286 aaKnown RBP14.73□□□□□ -0.05
RPP40-201ENST00000319533 PYGBP11216 843 aa14.73□□□□□ -0.05
RPP40-201ENST00000319533 BRD2P25440 801 aaKnown RBP14.73□□□□□ -0.05
RPP40-201ENST00000319533 GPD2P43304 727 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms