RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 TTLL3Q9Y4R7 772 aa14.6□□□□□ -0.07
VRK3-201ENST00000316763 TSC2P49815 1807 aa14.59□□□□□ -0.07
VRK3-201ENST00000316763 WDR91A4D1P6 747 aa14.59□□□□□ -0.07
VRK3-201ENST00000316763 HACD1B0YJ81 288 aa14.59□□□□□ -0.07
VRK3-201ENST00000316763 CLDN5O00501 218 aa14.59□□□□□ -0.07
VRK3-201ENST00000316763 OAZ2O95190 189 aa14.59□□□□□ -0.07
VRK3-201ENST00000316763 GJB5O95377 273 aa14.59□□□□□ -0.07
VRK3-201ENST00000316763 ALDH2P05091 517 aa14.59□□□□□ -0.07
VRK3-201ENST00000316763 PRKCHP24723 683 aa14.59□□□□□ -0.07
VRK3-201ENST00000316763 NEK3P51956 506 aa14.59□□□□□ -0.07
VRK3-201ENST00000316763 INTS6LQ5JSJ4 861 aaKnown RBP14.59□□□□□ -0.07
VRK3-201ENST00000316763 FAXCQ5TGI0 409 aa14.59□□□□□ -0.07
VRK3-201ENST00000316763 CCDC91Q7Z6B0 441 aa14.59□□□□□ -0.07
VRK3-201ENST00000316763 CAND1Q86VP6 1230 aaKnown RBP14.59□□□□□ -0.07
VRK3-201ENST00000316763 CEP57Q86XR8 500 aa14.59□□□□□ -0.07
VRK3-201ENST00000316763 HERC6Q8IVU3 1022 aa14.59□□□□□ -0.07
VRK3-201ENST00000316763 LRRC43Q8N309 656 aa14.59□□□□□ -0.07
VRK3-201ENST00000316763 PPM1NQ8N819 430 aa14.59□□□□□ -0.07
VRK3-201ENST00000316763 OR10T2Q8NGX3 314 aa14.59□□□□□ -0.07
VRK3-201ENST00000316763 QKIQ96PU8 341 aaKnown RBP eCLIP14.59□□□□□ -0.07
VRK3-201ENST00000316763 FERMT1Q9BQL6 677 aa14.59□□□□□ -0.07
VRK3-201ENST00000316763 POPDC2Q9HBU9 364 aa14.59□□□□□ -0.07
VRK3-201ENST00000316763 XAB2Q9HCS7 855 aaKnown RBP14.59□□□□□ -0.07
VRK3-201ENST00000316763 MARCH5Q9NX47 278 aa14.59□□□□□ -0.07
VRK3-201ENST00000316763 RCOR3Q9P2K3 495 aaPredicted RBP14.59□□□□□ -0.07
VRK3-201ENST00000316763 HCSTQ9UBK5 93 aa14.59□□□□□ -0.07
VRK3-201ENST00000316763 ADAM28Q9UKQ2 775 aa14.59□□□□□ -0.07
VRK3-201ENST00000316763 CHKBQ9Y259 395 aa14.59□□□□□ -0.07
VRK3-201ENST00000316763 VGLL3A8MV65 326 aa14.58□□□□□ -0.07
VRK3-201ENST00000316763 C2CD2LO14523 706 aa14.58□□□□□ -0.07
VRK3-201ENST00000316763 COPEO14579 308 aa14.58□□□□□ -0.07
VRK3-201ENST00000316763 SYN3O14994 580 aa14.58□□□□□ -0.07
VRK3-201ENST00000316763 TADA2AO75478 443 aa14.58□□□□□ -0.07
VRK3-201ENST00000316763 APOEP02649 317 aa14.58□□□□□ -0.07
VRK3-201ENST00000316763 PYGBP11216 843 aa14.58□□□□□ -0.07
VRK3-201ENST00000316763 SLC11A1P49279 550 aa14.58□□□□□ -0.07
VRK3-201ENST00000316763 YWHAHQ04917 246 aaPredicted RBP14.58□□□□□ -0.07
VRK3-201ENST00000316763 HEATR6Q6AI08 1181 aaKnown RBP14.58□□□□□ -0.07
VRK3-201ENST00000316763 CLEC20AQ6ZU45 233 aa14.58□□□□□ -0.07
VRK3-201ENST00000316763 PSTKQ8IV42 348 aaKnown RBP14.58□□□□□ -0.07
VRK3-201ENST00000316763 TRIM42Q8IWZ5 723 aa14.58□□□□□ -0.07
VRK3-201ENST00000316763 THEM5Q8N1Q8 247 aa14.58□□□□□ -0.07
VRK3-201ENST00000316763 AGGF1Q8N302 714 aaeCLIP14.58□□□□□ -0.07
VRK3-201ENST00000316763 CLEC4CQ8WTT0 213 aa14.58□□□□□ -0.07
VRK3-201ENST00000316763 KCTD13Q8WZ19 329 aa14.58□□□□□ -0.07
VRK3-201ENST00000316763 MTBPQ96DY7 904 aa14.58□□□□□ -0.07
VRK3-201ENST00000316763 SERAC1Q96JX3 654 aa14.58□□□□□ -0.07
VRK3-201ENST00000316763 CSPG4P5Q96PW8 444 aa14.58□□□□□ -0.07
VRK3-201ENST00000316763 KCTD15Q96SI1 283 aaPredicted RBP14.58□□□□□ -0.07
VRK3-201ENST00000316763 ZBED2Q9BTP6 218 aa14.58□□□□□ -0.07
VRK3-201ENST00000316763 TRIM55Q9BYV6 548 aa14.58□□□□□ -0.07
VRK3-201ENST00000316763 RC3H2Q9HBD1 1191 aaKnown RBP14.58□□□□□ -0.07
VRK3-201ENST00000316763 GBF1Q92538 1859 aa14.58□□□□□ -0.08
VRK3-201ENST00000316763 TRIM49D1C9J1S8 452 aa14.58□□□□□ -0.08
VRK3-201ENST00000316763 FAM155BO75949 473 aa14.58□□□□□ -0.08
VRK3-201ENST00000316763 KRT38O76015 456 aa14.58□□□□□ -0.08
VRK3-201ENST00000316763 BEST1O76090 585 aa14.58□□□□□ -0.08
VRK3-201ENST00000316763 STK10O94804 968 aaKnown RBP14.58□□□□□ -0.08
VRK3-201ENST00000316763 MAP3K6O95382 1288 aa14.58□□□□□ -0.08
VRK3-201ENST00000316763 GALTP07902 379 aa14.58□□□□□ -0.08
VRK3-201ENST00000316763 KRT16P08779 473 aa14.58□□□□□ -0.08
VRK3-201ENST00000316763 FAM200BP0CF97 657 aa14.58□□□□□ -0.08
VRK3-201ENST00000316763 DHRS4L1P0CG22 281 aa14.58□□□□□ -0.08
VRK3-201ENST00000316763 TFE3P19532 575 aaPredicted RBP14.58□□□□□ -0.08
VRK3-201ENST00000316763 BMP8BP34820 402 aa14.58□□□□□ -0.08
VRK3-201ENST00000316763 FDFT1P37268 417 aa14.58□□□□□ -0.08
VRK3-201ENST00000316763 MATKP42679 507 aa14.58□□□□□ -0.08
VRK3-201ENST00000316763 HTRA4P83105 476 aaPredicted RBP14.58□□□□□ -0.08
VRK3-201ENST00000316763 PREPLQ4J6C6 727 aaPredicted RBP14.58□□□□□ -0.08
VRK3-201ENST00000316763 KCNT2Q6UVM3 1135 aa14.58□□□□□ -0.08
VRK3-201ENST00000316763 NLRP9Q7RTR0 991 aa14.58□□□□□ -0.08
VRK3-201ENST00000316763 FAM35AQ86V20 835 aa14.58□□□□□ -0.08
VRK3-201ENST00000316763 PIGZQ86VD9 579 aa14.58□□□□□ -0.08
VRK3-201ENST00000316763 KIF2BQ8N4N8 673 aa14.58□□□□□ -0.08
VRK3-201ENST00000316763 TFB1MQ8WVM0 346 aaKnown RBP14.58□□□□□ -0.08
VRK3-201ENST00000316763 INPP5DQ92835 1189 aa14.58□□□□□ -0.08
VRK3-201ENST00000316763 YME1L1Q96TA2 773 aa14.58□□□□□ -0.08
VRK3-201ENST00000316763 COLEC11Q9BWP8 271 aa14.58□□□□□ -0.08
VRK3-201ENST00000316763 TSSK1BQ9BXA7 367 aa14.58□□□□□ -0.08
VRK3-201ENST00000316763 NPHS2Q9NP85 383 aa14.58□□□□□ -0.08
VRK3-201ENST00000316763 KRT82Q9NSB4 513 aa14.58□□□□□ -0.08
VRK3-201ENST00000316763 STK38LQ9Y2H1 464 aa14.58□□□□□ -0.08
VRK3-201ENST00000316763 HNRNPCL1O60812 293 aaKnown RBP14.57□□□□□ -0.08
VRK3-201ENST00000316763 SERPINB9P50453 376 aa14.57□□□□□ -0.08
VRK3-201ENST00000316763 CDK16Q00536 496 aa14.57□□□□□ -0.08
VRK3-201ENST00000316763 GBE1Q04446 702 aa14.57□□□□□ -0.08
VRK3-201ENST00000316763 MAPRE1Q15691 268 aaKnown RBP14.57□□□□□ -0.08
VRK3-201ENST00000316763 PARP6Q2NL67 630 aa14.57□□□□□ -0.08
VRK3-201ENST00000316763 SLC25A52Q3SY17 297 aa14.57□□□□□ -0.08
VRK3-201ENST00000316763 WLSQ5T9L3 541 aa14.57□□□□□ -0.08
VRK3-201ENST00000316763 PRPF39Q86UA1 669 aaKnown RBP14.57□□□□□ -0.08
VRK3-201ENST00000316763 LRRTM3Q86VH5 581 aa14.57□□□□□ -0.08
VRK3-201ENST00000316763 ZNF276Q8N554 614 aa14.57□□□□□ -0.08
VRK3-201ENST00000316763 GSDMBQ8TAX9 411 aa14.57□□□□□ -0.08
VRK3-201ENST00000316763 FAM111AQ96PZ2 611 aa14.57□□□□□ -0.08
VRK3-201ENST00000316763 EBNA1BP2Q99848 306 aaKnown RBP14.57□□□□□ -0.08
VRK3-201ENST00000316763 MED10Q9BTT4 135 aa14.57□□□□□ -0.08
VRK3-201ENST00000316763 TUBB6Q9BUF5 446 aa14.57□□□□□ -0.08
VRK3-201ENST00000316763 LRMDAQ9H2I8 198 aa14.57□□□□□ -0.08
VRK3-201ENST00000316763 CSNK1G1Q9HCP0 422 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms