RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 OR2B2Q9GZK3 357 aa6.82□□□□□ -1.32
ZNF540-201ENST00000316433 PDGFDQ9GZP0 370 aaPredicted RBP6.82□□□□□ -1.32
ZNF540-201ENST00000316433 STN1Q9H668 368 aaKnown RBP6.82□□□□□ -1.32
ZNF540-201ENST00000316433 RMND5AQ9H871 391 aa6.82□□□□□ -1.32
ZNF540-201ENST00000316433 ATP13A2Q9NQ11 1180 aa6.82□□□□□ -1.32
ZNF540-201ENST00000316433 SEPT3Q9UH03 358 aa6.82□□□□□ -1.32
ZNF540-201ENST00000316433 SORCS3Q9UPU3 1222 aa6.82□□□□□ -1.32
ZNF540-201ENST00000316433 ALG6Q9Y672 507 aa6.82□□□□□ -1.32
ZNF540-201ENST00000316433 IGSF9BQ9UPX0 1349 aa6.81□□□□□ -1.32
ZNF540-201ENST00000316433 A0A1W2PPW3 197 aa6.81□□□□□ -1.32
ZNF540-201ENST00000316433 ZNF839A8K0R7 811 aa6.81□□□□□ -1.32
ZNF540-201ENST00000316433 ATP6V1G2-DDX39BF2Z307 99 aa6.81□□□□□ -1.32
ZNF540-201ENST00000316433 SLC9A3R1O14745 358 aaPredicted RBP6.81□□□□□ -1.32
ZNF540-201ENST00000316433 GIPC1O14908 333 aa6.81□□□□□ -1.32
ZNF540-201ENST00000316433 AREL1O15033 823 aa6.81□□□□□ -1.32
ZNF540-201ENST00000316433 TM9SF1O15321 606 aa6.81□□□□□ -1.32
ZNF540-201ENST00000316433 HDAC3O15379 428 aa6.81□□□□□ -1.32
ZNF540-201ENST00000316433 SLITRK3O94933 977 aa6.81□□□□□ -1.32
ZNF540-201ENST00000316433 ENO1P06733 434 aaKnown RBP6.81□□□□□ -1.32
ZNF540-201ENST00000316433 CETPP11597 493 aa6.81□□□□□ -1.32
ZNF540-201ENST00000316433 CD247P20963 164 aa6.81□□□□□ -1.32
ZNF540-201ENST00000316433 POLR2BP30876 1174 aaKnown RBP6.81□□□□□ -1.32
ZNF540-201ENST00000316433 NDST2P52849 883 aa6.81□□□□□ -1.32
ZNF540-201ENST00000316433 ECT2LQ008S8 904 aa6.81□□□□□ -1.32
ZNF540-201ENST00000316433 GALK2Q01415 458 aa6.81□□□□□ -1.32
ZNF540-201ENST00000316433 CNTN2Q02246 1040 aa6.81□□□□□ -1.32
ZNF540-201ENST00000316433 OVGP1Q12889 678 aa6.81□□□□□ -1.32
ZNF540-201ENST00000316433 CCNIQ14094 377 aa6.81□□□□□ -1.32
ZNF540-201ENST00000316433 NFE2L1Q14494 772 aa6.81□□□□□ -1.32
ZNF540-201ENST00000316433 HIC1Q14526 733 aa6.81□□□□□ -1.32
ZNF540-201ENST00000316433 ZBED5Q49AG3 693 aa6.81□□□□□ -1.32
ZNF540-201ENST00000316433 ACAD10Q6JQN1 1059 aa6.81□□□□□ -1.32
ZNF540-201ENST00000316433 ANKRD26P1Q6NSI1 321 aa6.81□□□□□ -1.32
ZNF540-201ENST00000316433 ADAT2Q7Z6V5 191 aaKnown RBP6.81□□□□□ -1.32
ZNF540-201ENST00000316433 SIAH1Q8IUQ4 282 aa6.81□□□□□ -1.32
ZNF540-201ENST00000316433 TMEM126BQ8IUX1 230 aa6.81□□□□□ -1.32
ZNF540-201ENST00000316433 MAP4K3Q8IVH8 894 aa6.81□□□□□ -1.32
ZNF540-201ENST00000316433 C4orf19Q8IY42 314 aa6.81□□□□□ -1.32
ZNF540-201ENST00000316433 CARNMT1Q8N4J0 409 aa6.81□□□□□ -1.32
ZNF540-201ENST00000316433 CATSPER1Q8NEC5 780 aa6.81□□□□□ -1.32
ZNF540-201ENST00000316433 OR10Z1Q8NGY1 313 aa6.81□□□□□ -1.32
ZNF540-201ENST00000316433 ZFPM2Q8WW38 1151 aa6.81□□□□□ -1.32
ZNF540-201ENST00000316433 VPS33AQ96AX1 596 aa6.81□□□□□ -1.32
ZNF540-201ENST00000316433 ZNF512Q96ME7 567 aaPredicted RBP6.81□□□□□ -1.32
ZNF540-201ENST00000316433 ACCSQ96QU6 501 aa6.81□□□□□ -1.32
ZNF540-201ENST00000316433 TARS2Q9BW92 718 aaKnown RBP6.81□□□□□ -1.32
ZNF540-201ENST00000316433 ACAT2Q9BWD1 397 aa6.81□□□□□ -1.32
ZNF540-201ENST00000316433 TMEM120AQ9BXJ8 343 aa6.81□□□□□ -1.32
ZNF540-201ENST00000316433 SLC2A11Q9BYW1 496 aa6.81□□□□□ -1.32
ZNF540-201ENST00000316433 DCLK3Q9C098 648 aa6.81□□□□□ -1.32
ZNF540-201ENST00000316433 RPF2Q9H7B2 306 aaKnown RBP6.81□□□□□ -1.32
ZNF540-201ENST00000316433 ATP13A3Q9H7F0 1226 aa6.81□□□□□ -1.32
ZNF540-201ENST00000316433 TMEM8AQ9HCN3 771 aa6.81□□□□□ -1.32
ZNF540-201ENST00000316433 THG1LQ9NWX6 298 aaKnown RBP6.81□□□□□ -1.32
ZNF540-201ENST00000316433 BRWD3Q6RI45 1802 aa6.81□□□□□ -1.32
ZNF540-201ENST00000316433 BRCA1P38398 1863 aaKnown RBP6.81□□□□□ -1.32
ZNF540-201ENST00000316433 PLXNA1Q9UIW2 1896 aa6.81□□□□□ -1.32
ZNF540-201ENST00000316433 TCRBV5S1A1TA0A578 114 aa6.81□□□□□ -1.32
ZNF540-201ENST00000316433 RNGTTO60942 597 aaKnown RBP6.81□□□□□ -1.32
ZNF540-201ENST00000316433 JRKO75564 520 aa6.81□□□□□ -1.32
ZNF540-201ENST00000316433 SPAG6O75602 509 aa6.81□□□□□ -1.32
ZNF540-201ENST00000316433 LSM8O95777 96 aaKnown RBP6.81□□□□□ -1.32
ZNF540-201ENST00000316433 KRT3P12035 628 aa6.81□□□□□ -1.32
ZNF540-201ENST00000316433 KRT13P13646 458 aa6.81□□□□□ -1.32
ZNF540-201ENST00000316433 HOXB1P14653 301 aaPredicted RBP6.81□□□□□ -1.32
ZNF540-201ENST00000316433 RFC4P35249 363 aa6.81□□□□□ -1.32
ZNF540-201ENST00000316433 GNL1P36915 607 aaPredicted RBP6.81□□□□□ -1.32
ZNF540-201ENST00000316433 HSPA13P48723 471 aa6.81□□□□□ -1.32
ZNF540-201ENST00000316433 COPZ1P61923 177 aa6.81□□□□□ -1.32
ZNF540-201ENST00000316433 C1QBPQ07021 282 aaKnown RBP6.81□□□□□ -1.32
ZNF540-201ENST00000316433 FRG1Q14331 258 aaKnown RBP6.81□□□□□ -1.32
ZNF540-201ENST00000316433 POU6F1Q14863 301 aa6.81□□□□□ -1.32
ZNF540-201ENST00000316433 MORF4L2Q15014 288 aa6.81□□□□□ -1.32
ZNF540-201ENST00000316433 AOC3Q16853 763 aa6.81□□□□□ -1.32
ZNF540-201ENST00000316433 LRIT3Q3SXY7 679 aa6.81□□□□□ -1.32
ZNF540-201ENST00000316433 DALRD3Q5D0E6 543 aaKnown RBP6.81□□□□□ -1.32
ZNF540-201ENST00000316433 EFHC2Q5JST6 749 aa6.81□□□□□ -1.32
ZNF540-201ENST00000316433 C6orf10Q5SRN2 563 aa6.81□□□□□ -1.32
ZNF540-201ENST00000316433 C6orf132Q5T0Z8 1188 aa6.81□□□□□ -1.32
ZNF540-201ENST00000316433 IRAK1BP1Q5VVH5 260 aa6.81□□□□□ -1.32
ZNF540-201ENST00000316433 PRR5LQ6MZQ0 368 aa6.81□□□□□ -1.32
ZNF540-201ENST00000316433 APOBEC3HQ6NTF7 200 aaKnown RBP6.81□□□□□ -1.32
ZNF540-201ENST00000316433 TTC27Q6P3X3 843 aa6.81□□□□□ -1.32
ZNF540-201ENST00000316433 PCGF5Q86SE9 256 aa6.81□□□□□ -1.32
ZNF540-201ENST00000316433 FNIP1Q8TF40 1166 aa6.81□□□□□ -1.32
ZNF540-201ENST00000316433 TRIB2Q92519 343 aa6.81□□□□□ -1.32
ZNF540-201ENST00000316433 TANKQ92844 425 aa6.81□□□□□ -1.32
ZNF540-201ENST00000316433 DACT3Q96B18 629 aaPredicted RBP6.81□□□□□ -1.32
ZNF540-201ENST00000316433 TXNDC15Q96J42 360 aa6.81□□□□□ -1.32
ZNF540-201ENST00000316433 FEM1CQ96JP0 617 aa6.81□□□□□ -1.32
ZNF540-201ENST00000316433 TBCBQ99426 244 aa6.81□□□□□ -1.32
ZNF540-201ENST00000316433 MKRN2Q9H000 416 aaKnown RBP6.81□□□□□ -1.32
ZNF540-201ENST00000316433 SMYD3Q9H7B4 428 aa6.81□□□□□ -1.32
ZNF540-201ENST00000316433 IFT22Q9H7X7 185 aa6.81□□□□□ -1.32
ZNF540-201ENST00000316433 ANLNQ9NQW6 1124 aa6.81□□□□□ -1.32
ZNF540-201ENST00000316433 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.81□□□□□ -1.32
ZNF540-201ENST00000316433 ARMCX1Q9P291 453 aa6.81□□□□□ -1.32
ZNF540-201ENST00000316433 CDC14AQ9UNH5 594 aa6.81□□□□□ -1.32
ZNF540-201ENST00000316433 GNEQ9Y223 722 aaKnown RBP6.81□□□□□ -1.32
ZNF540-201ENST00000316433 TRAF6Q9Y4K3 522 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms