RNA–Protein interactions for RNA: ENST00000315684.12

CTC1-201, Transcript of CST telomere replication complex component 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTC1, Length 7,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-201ENST00000315684 KRT20P35900 424 aa9.21□□□□□ -0.93
CTC1-201ENST00000315684 SARSP49591 514 aaKnown RBP9.21□□□□□ -0.93
CTC1-201ENST00000315684 CRADDP78560 199 aa9.21□□□□□ -0.93
CTC1-201ENST00000315684 HSPA14Q0VDF9 509 aa9.21□□□□□ -0.93
CTC1-201ENST00000315684 STRA8Q7Z7C7 330 aa9.21□□□□□ -0.93
CTC1-201ENST00000315684 GDPD5Q8WTR4 605 aa9.21□□□□□ -0.93
CTC1-201ENST00000315684 C17orf80Q9BSJ5 609 aa9.21□□□□□ -0.93
CTC1-201ENST00000315684 RBM12Q9NTZ6 932 aaKnown RBP9.21□□□□□ -0.93
CTC1-201ENST00000315684 GPN3Q9UHW5 284 aaPredicted RBP9.21□□□□□ -0.93
CTC1-201ENST00000315684 CAPN7Q9Y6W3 813 aa9.21□□□□□ -0.93
CTC1-201ENST00000315684 C1orf232A0A0U1RR37 186 aa9.21□□□□□ -0.93
CTC1-201ENST00000315684 SNAI1O95863 264 aaPredicted RBP9.21□□□□□ -0.93
CTC1-201ENST00000315684 ABRQ12979 859 aa9.21□□□□□ -0.93
CTC1-201ENST00000315684 PDCD2Q16342 344 aaPredicted RBP9.21□□□□□ -0.93
CTC1-201ENST00000315684 BEND6Q5SZJ8 279 aaPredicted RBP9.21□□□□□ -0.93
CTC1-201ENST00000315684 ZNF384Q8TF68 577 aa9.21□□□□□ -0.93
CTC1-201ENST00000315684 CYB5D2Q8WUJ1 264 aa9.21□□□□□ -0.93
CTC1-201ENST00000315684 ELMO1Q92556 727 aa9.21□□□□□ -0.93
CTC1-201ENST00000315684 ZYG11BQ9C0D3 744 aa9.21□□□□□ -0.93
CTC1-201ENST00000315684 ALKBH4Q9NXW9 302 aa9.21□□□□□ -0.93
CTC1-201ENST00000315684 CYP3A7-CYP3A51PA0A087WV96 503 aa9.21□□□□□ -0.93
CTC1-201ENST00000315684 ABHD14A-ACY1A0A1B0GW23 586 aa9.21□□□□□ -0.93
CTC1-201ENST00000315684 FAM187AA6NFU0 413 aa9.21□□□□□ -0.93
CTC1-201ENST00000315684 CYP3A7P24462 503 aa9.21□□□□□ -0.93
CTC1-201ENST00000315684 ARHGAP25P42331 645 aa9.21□□□□□ -0.93
CTC1-201ENST00000315684 MAGEA4P43358 317 aa9.21□□□□□ -0.93
CTC1-201ENST00000315684 MBTD1Q05BQ5 628 aa9.21□□□□□ -0.93
CTC1-201ENST00000315684 C16orf46Q6P387 395 aa9.21□□□□□ -0.93
CTC1-201ENST00000315684 WNT8BQ93098 351 aa9.21□□□□□ -0.93
CTC1-201ENST00000315684 TRABDQ9H4I3 376 aa9.21□□□□□ -0.93
CTC1-201ENST00000315684 SPATA6Q9NWH7 488 aaPredicted RBP9.21□□□□□ -0.93
CTC1-201ENST00000315684 NCDNQ9UBB6 729 aa9.21□□□□□ -0.93
CTC1-201ENST00000315684 PADI4Q9UM07 663 aa9.21□□□□□ -0.93
CTC1-201ENST00000315684 MYO1GB0I1T2 1018 aa9.21□□□□□ -0.94
CTC1-201ENST00000315684 ELFN1P0C7U0 828 aa9.21□□□□□ -0.94
CTC1-201ENST00000315684 NOS2P35228 1153 aa9.21□□□□□ -0.94
CTC1-201ENST00000315684 CASP8Q14790 479 aa9.21□□□□□ -0.94
CTC1-201ENST00000315684 E4F1Q66K89 784 aaPredicted RBP9.21□□□□□ -0.94
CTC1-201ENST00000315684 PPIL6Q8IXY8 311 aa9.21□□□□□ -0.94
CTC1-201ENST00000315684 PHF21BQ96EK2 531 aa9.21□□□□□ -0.94
CTC1-201ENST00000315684 DPEP2Q9H4A9 486 aa9.21□□□□□ -0.94
CTC1-201ENST00000315684 TBC1D13Q9NVG8 400 aa9.21□□□□□ -0.94
CTC1-201ENST00000315684 SEPT3Q9UH03 358 aa9.21□□□□□ -0.94
CTC1-201ENST00000315684 WDR27A2RRH5 827 aa9.21□□□□□ -0.94
CTC1-201ENST00000315684 PSTPIP1O43586 416 aa9.21□□□□□ -0.94
CTC1-201ENST00000315684 TCN1P20061 433 aaPredicted RBP9.21□□□□□ -0.94
CTC1-201ENST00000315684 LMO2P25791 158 aa9.21□□□□□ -0.94
CTC1-201ENST00000315684 MGAT1P26572 445 aa9.21□□□□□ -0.94
CTC1-201ENST00000315684 COILP38432 576 aaPredicted RBP9.21□□□□□ -0.94
CTC1-201ENST00000315684 GPR15P49685 360 aa9.21□□□□□ -0.94
CTC1-201ENST00000315684 SEMA3FQ13275 785 aa9.21□□□□□ -0.94
CTC1-201ENST00000315684 TP53BP2Q13625 1128 aa9.21□□□□□ -0.94
CTC1-201ENST00000315684 KRT72Q14CN4 511 aa9.21□□□□□ -0.94
CTC1-201ENST00000315684 FAM46CQ5VWP2 391 aa9.21□□□□□ -0.94
CTC1-201ENST00000315684 PIP4K2CQ8TBX8 421 aa9.21□□□□□ -0.94
CTC1-201ENST00000315684 PRDM12Q9H4Q4 367 aa9.21□□□□□ -0.94
CTC1-201ENST00000315684 ISM1B1AKI9 464 aa9.21□□□□□ -0.94
CTC1-201ENST00000315684 RAD51CO43502 376 aa9.21□□□□□ -0.94
CTC1-201ENST00000315684 CLASP2O75122 1294 aaKnown RBP9.21□□□□□ -0.94
CTC1-201ENST00000315684 LSM8O95777 96 aaKnown RBP9.21□□□□□ -0.94
CTC1-201ENST00000315684 CST3P01034 146 aaPredicted RBP9.21□□□□□ -0.94
CTC1-201ENST00000315684 HSPA8P11142 646 aaKnown RBP9.21□□□□□ -0.94
CTC1-201ENST00000315684 ALAS2P22557 587 aa9.21□□□□□ -0.94
CTC1-201ENST00000315684 TAF8Q7Z7C8 310 aa9.21□□□□□ -0.94
CTC1-201ENST00000315684 TBL1YQ9BQ87 522 aa9.21□□□□□ -0.94
CTC1-201ENST00000315684 ASPSCR1Q9BZE9 553 aa9.21□□□□□ -0.94
CTC1-201ENST00000315684 RNF39Q9H2S5 420 aa9.21□□□□□ -0.94
CTC1-201ENST00000315684 ATP13A3Q9H7F0 1226 aa9.21□□□□□ -0.94
CTC1-201ENST00000315684 IMP3Q9NV31 184 aaKnown RBP9.21□□□□□ -0.94
CTC1-201ENST00000315684 VAV3Q9UKW4 847 aa9.21□□□□□ -0.94
CTC1-201ENST00000315684 SALL3Q9BXA9 1300 aa9.2□□□□□ -0.94
CTC1-201ENST00000315684 SSU72P8A0A1W2PR75 194 aa9.2□□□□□ -0.94
CTC1-201ENST00000315684 RNF103O00237 685 aa9.2□□□□□ -0.94
CTC1-201ENST00000315684 C1RP00736 705 aa9.2□□□□□ -0.94
CTC1-201ENST00000315684 OR56A5P0C7T3 313 aa9.2□□□□□ -0.94
CTC1-201ENST00000315684 TYMPP19971 482 aa9.2□□□□□ -0.94
CTC1-201ENST00000315684 GTF2BQ00403 316 aa9.2□□□□□ -0.94
CTC1-201ENST00000315684 ALDH6A1Q02252 535 aaKnown RBP9.2□□□□□ -0.94
CTC1-201ENST00000315684 WDR59Q6PJI9 974 aa9.2□□□□□ -0.94
CTC1-201ENST00000315684 TMEM192Q8IY95 271 aa9.2□□□□□ -0.94
CTC1-201ENST00000315684 CCDC138Q96M89 665 aa9.2□□□□□ -0.94
CTC1-201ENST00000315684 TRMT61BQ9BVS5 477 aaKnown RBP9.2□□□□□ -0.94
CTC1-201ENST00000315684 ASB8Q9H765 288 aa9.2□□□□□ -0.94
CTC1-201ENST00000315684 ARHGEF4Q9NR80 690 aa9.2□□□□□ -0.94
CTC1-201ENST00000315684 PCDH10Q9P2E7 1040 aa9.2□□□□□ -0.94
CTC1-201ENST00000315684 SNX12Q9UMY4 172 aa9.2□□□□□ -0.94
CTC1-201ENST00000315684 TRIM33Q9UPN9 1127 aa9.2□□□□□ -0.94
CTC1-201ENST00000315684 ZFP37Q9Y6Q3 630 aaPredicted RBP9.2□□□□□ -0.94
CTC1-201ENST00000315684 CPED1A4D0V7 1026 aa9.2□□□□□ -0.94
CTC1-201ENST00000315684 GRID2IPA4D2P6 1211 aa9.2□□□□□ -0.94
CTC1-201ENST00000315684 AARSP49588 968 aaKnown RBP eCLIP9.2□□□□□ -0.947e-7■■■■□ 22.3
CTC1-201ENST00000315684 COL9A2Q14055 689 aaPredicted RBP9.2□□□□□ -0.94
CTC1-201ENST00000315684 CNSTQ6PJW8 725 aa9.2□□□□□ -0.94
CTC1-201ENST00000315684 VITQ6UXI7 678 aa9.2□□□□□ -0.94
CTC1-201ENST00000315684 BTN2A2Q8WVV5 523 aa9.2□□□□□ -0.94
CTC1-201ENST00000315684 RELTQ969Z4 430 aa9.2□□□□□ -0.94
CTC1-201ENST00000315684 KCNK16Q96T55 309 aa9.2□□□□□ -0.94
CTC1-201ENST00000315684 MLPHQ9BV36 600 aaPredicted RBP9.2□□□□□ -0.94
CTC1-201ENST00000315684 FAM129AQ9BZQ8 928 aa9.2□□□□□ -0.94
CTC1-201ENST00000315684 POLR1EQ9GZS1 481 aaKnown RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms