RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 FAM171BQ6P995 826 aa12.77□□□□□ -0.37
RNF4-201ENST00000314289 ZNF598Q86UK7 904 aaKnown RBP12.77□□□□□ -0.37
RNF4-201ENST00000314289 DHRS4Q9BTZ2 278 aa12.77□□□□□ -0.37
RNF4-201ENST00000314289 DMAP1Q9NPF5 467 aaPredicted RBP12.77□□□□□ -0.37
RNF4-201ENST00000314289 PTCH2Q9Y6C5 1203 aa12.77□□□□□ -0.37
RNF4-201ENST00000314289 E2F8A0AVK6 867 aa12.77□□□□□ -0.37
RNF4-201ENST00000314289 NT5C1B-RDH14C9J2C7 533 aa12.77□□□□□ -0.37
RNF4-201ENST00000314289 DCLK1O15075 740 aa12.77□□□□□ -0.37
RNF4-201ENST00000314289 SLC5A3P53794 718 aa12.77□□□□□ -0.37
RNF4-201ENST00000314289 OVGP1Q12889 678 aa12.77□□□□□ -0.37
RNF4-201ENST00000314289 NR1H3Q13133 447 aa12.77□□□□□ -0.37
RNF4-201ENST00000314289 GLB1LQ6UWU2 654 aa12.77□□□□□ -0.37
RNF4-201ENST00000314289 CDHR3Q6ZTQ4 885 aa12.77□□□□□ -0.37
RNF4-201ENST00000314289 SPATA21Q7Z572 469 aa12.77□□□□□ -0.37
RNF4-201ENST00000314289 SPATA2LQ8IUW3 424 aaPredicted RBP12.77□□□□□ -0.37
RNF4-201ENST00000314289 DQX1Q8TE96 717 aaKnown RBP12.77□□□□□ -0.37
RNF4-201ENST00000314289 SLC44A1Q8WWI5 657 aa12.77□□□□□ -0.37
RNF4-201ENST00000314289 FAM111AQ96PZ2 611 aa12.77□□□□□ -0.37
RNF4-201ENST00000314289 STARD7Q9NQZ5 370 aa12.77□□□□□ -0.37
RNF4-201ENST00000314289 PDE4DIPQ5VU43 2346 aa12.77□□□□□ -0.37
RNF4-201ENST00000314289 INHAP05111 366 aa12.76□□□□□ -0.37
RNF4-201ENST00000314289 GMPRP36959 345 aa12.76□□□□□ -0.37
RNF4-201ENST00000314289 ARHGAP36Q6ZRI8 547 aa12.76□□□□□ -0.37
RNF4-201ENST00000314289 LRRC6Q86X45 466 aa12.76□□□□□ -0.37
RNF4-201ENST00000314289 FITM2Q8N6M3 262 aa12.76□□□□□ -0.37
RNF4-201ENST00000314289 MAB21L3Q8N8X9 362 aa12.76□□□□□ -0.37
RNF4-201ENST00000314289 TTC17Q96AE7 1141 aa12.76□□□□□ -0.37
RNF4-201ENST00000314289 TSC2P49815 1807 aa12.76□□□□□ -0.37
RNF4-201ENST00000314289 A0A1W2PQ45 241 aaPredicted RBP12.76□□□□□ -0.37
RNF4-201ENST00000314289 A0A1W2PQY0 241 aa12.76□□□□□ -0.37
RNF4-201ENST00000314289 PRPF4O43172 522 aaKnown RBP eCLIP12.76□□□□□ -0.37
RNF4-201ENST00000314289 LPXNO60711 386 aa12.76□□□□□ -0.37
RNF4-201ENST00000314289 C1QAP02745 245 aa12.76□□□□□ -0.37
RNF4-201ENST00000314289 IRX4P78413 519 aa12.76□□□□□ -0.37
RNF4-201ENST00000314289 TSPY1Q01534 308 aa12.76□□□□□ -0.37
RNF4-201ENST00000314289 PDK1Q15118 436 aa12.76□□□□□ -0.37
RNF4-201ENST00000314289 DEFB115Q30KQ5 88 aa12.76□□□□□ -0.37
RNF4-201ENST00000314289 VSIG1Q86XK7 387 aa12.76□□□□□ -0.37
RNF4-201ENST00000314289 SMC1BQ8NDV3 1235 aa12.76□□□□□ -0.37
RNF4-201ENST00000314289 PTPRN2Q92932 1015 aa12.76□□□□□ -0.37
RNF4-201ENST00000314289 EBNA1BP2Q99848 306 aaKnown RBP12.76□□□□□ -0.37
RNF4-201ENST00000314289 NMUR1Q9HB89 426 aa12.76□□□□□ -0.37
RNF4-201ENST00000314289 CSNK1G1Q9HCP0 422 aa12.76□□□□□ -0.37
RNF4-201ENST00000314289 CREBZFQ9NS37 354 aa12.76□□□□□ -0.37
RNF4-201ENST00000314289 PHTF1Q9UMS5 762 aa12.76□□□□□ -0.37
RNF4-201ENST00000314289 C9IYK1 514 aa12.75□□□□□ -0.37
RNF4-201ENST00000314289 M0QZQ0 153 aa12.75□□□□□ -0.37
RNF4-201ENST00000314289 SMAPO00193 183 aa12.75□□□□□ -0.37
RNF4-201ENST00000314289 UPP2O95045 317 aa12.75□□□□□ -0.37
RNF4-201ENST00000314289 APOEP02649 317 aa12.75□□□□□ -0.37
RNF4-201ENST00000314289 MGAT5Q09328 741 aa12.75□□□□□ -0.37
RNF4-201ENST00000314289 PRKD1Q15139 912 aaPredicted RBP12.75□□□□□ -0.37
RNF4-201ENST00000314289 TRIM68Q6AZZ1 485 aa12.75□□□□□ -0.37
RNF4-201ENST00000314289 THEM5Q8N1Q8 247 aa12.75□□□□□ -0.37
RNF4-201ENST00000314289 ATAD1Q8NBU5 361 aa12.75□□□□□ -0.37
RNF4-201ENST00000314289 OR52K1Q8NGK4 314 aa12.75□□□□□ -0.37
RNF4-201ENST00000314289 LRRC8CQ8TDW0 803 aa12.75□□□□□ -0.37
RNF4-201ENST00000314289 PKMYT1Q99640 499 aa12.75□□□□□ -0.37
RNF4-201ENST00000314289 TBC1D13Q9NVG8 400 aa12.75□□□□□ -0.37
RNF4-201ENST00000314289 SMG5Q9UPR3 1016 aaKnown RBP12.75□□□□□ -0.37
RNF4-201ENST00000314289 ZNF487B1APH4 448 aa12.75□□□□□ -0.37
RNF4-201ENST00000314289 DFFAO00273 331 aa12.75□□□□□ -0.37
RNF4-201ENST00000314289 ZBTB24O43167 697 aaPredicted RBP12.75□□□□□ -0.37
RNF4-201ENST00000314289 OAS1P00973 400 aaKnown RBP12.75□□□□□ -0.37
RNF4-201ENST00000314289 CST5P28325 142 aaPredicted RBP12.75□□□□□ -0.37
RNF4-201ENST00000314289 SATB1Q01826 763 aa12.75□□□□□ -0.37
RNF4-201ENST00000314289 BNIP1Q12981 228 aa12.75□□□□□ -0.37
RNF4-201ENST00000314289 ZBTB17Q13105 803 aa12.75□□□□□ -0.37
RNF4-201ENST00000314289 SEMA5AQ13591 1074 aa12.75□□□□□ -0.37
RNF4-201ENST00000314289 ARL13BQ3SXY8 428 aa12.75□□□□□ -0.37
RNF4-201ENST00000314289 DCLRE1AQ6PJP8 1040 aa12.75□□□□□ -0.37
RNF4-201ENST00000314289 TRAF7Q6Q0C0 670 aa12.75□□□□□ -0.37
RNF4-201ENST00000314289 BANPQ8N9N5 519 aa12.75□□□□□ -0.37
RNF4-201ENST00000314289 SH3TC2Q8TF17 1288 aa12.75□□□□□ -0.37
RNF4-201ENST00000314289 CASP10Q92851 521 aa12.75□□□□□ -0.37
RNF4-201ENST00000314289 ATXN7L3BQ96GX2 97 aa12.75□□□□□ -0.37
RNF4-201ENST00000314289 MECRQ9BV79 373 aa12.75□□□□□ -0.37
RNF4-201ENST00000314289 NDFIP2Q9NV92 336 aa12.75□□□□□ -0.37
RNF4-201ENST00000314289 SYBUQ9NX95 663 aa12.75□□□□□ -0.37
RNF4-201ENST00000314289 CDH23Q9H251 3354 aa12.75□□□□□ -0.37
RNF4-201ENST00000314289 IQANK1A0A1B0GTG1 560 aa12.75□□□□□ -0.37
RNF4-201ENST00000314289 PPP1R12AO14974 1030 aaPredicted RBP12.75□□□□□ -0.37
RNF4-201ENST00000314289 NEFHP12036 1026 aa12.75□□□□□ -0.37
RNF4-201ENST00000314289 TPH1P17752 444 aa12.75□□□□□ -0.37
RNF4-201ENST00000314289 CCND1P24385 295 aa12.75□□□□□ -0.37
RNF4-201ENST00000314289 ABCG1P45844 678 aa12.75□□□□□ -0.37
RNF4-201ENST00000314289 SLC24A5Q71RS6 500 aa12.75□□□□□ -0.37
RNF4-201ENST00000314289 KDELC2Q7Z4H8 507 aa12.75□□□□□ -0.37
RNF4-201ENST00000314289 SLC26A11Q86WA9 606 aa12.75□□□□□ -0.37
RNF4-201ENST00000314289 SUSD3Q96L08 255 aa12.75□□□□□ -0.37
RNF4-201ENST00000314289 OSER1Q9NX31 292 aa12.75□□□□□ -0.37
RNF4-201ENST00000314289 SLC27A5Q9Y2P5 690 aa12.75□□□□□ -0.37
RNF4-201ENST00000314289 ARL2BPQ9Y2Y0 163 aa12.75□□□□□ -0.37
RNF4-201ENST00000314289 PTPN3P26045 913 aa12.74□□□□□ -0.37
RNF4-201ENST00000314289 SEMA3BQ13214 749 aa12.74□□□□□ -0.37
RNF4-201ENST00000314289 PPP2R5DQ14738 602 aa12.74□□□□□ -0.37
RNF4-201ENST00000314289 GALNTL6Q49A17 601 aa12.74□□□□□ -0.37
RNF4-201ENST00000314289 NOMO2Q5JPE7 1267 aa12.74□□□□□ -0.37
RNF4-201ENST00000314289 MAP3K21Q5TCX8 1036 aa12.74□□□□□ -0.37
RNF4-201ENST00000314289 BTBD8Q5XKL5 378 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms