RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 KIAA1683Q9H0B3 1180 aa9.01□□□□□ -0.97
COL6A5-202ENST00000312481 SLC30A1Q9Y6M5 507 aa9.01□□□□□ -0.97
COL6A5-202ENST00000312481 RRM1P23921 792 aa9.01□□□□□ -0.97
COL6A5-202ENST00000312481 CRHR1P34998 444 aa9.01□□□□□ -0.97
COL6A5-202ENST00000312481 SLC26A3P40879 764 aa9.01□□□□□ -0.97
COL6A5-202ENST00000312481 SNAPC2Q13487 334 aa9.01□□□□□ -0.97
COL6A5-202ENST00000312481 MZT2BQ6NZ67 158 aa9.01□□□□□ -0.97
COL6A5-202ENST00000312481 KRT74Q7RTS7 529 aa9.01□□□□□ -0.97
COL6A5-202ENST00000312481 ARHGEF19Q8IW93 802 aa9.01□□□□□ -0.97
COL6A5-202ENST00000312481 THRSPQ92748 146 aa9.01□□□□□ -0.97
COL6A5-202ENST00000312481 EGFL8Q99944 293 aa9.01□□□□□ -0.97
COL6A5-202ENST00000312481 HPS4Q9NQG7 708 aa9.01□□□□□ -0.97
COL6A5-202ENST00000312481 CABYRO75952 493 aa9.01□□□□□ -0.97
COL6A5-202ENST00000312481 GJB6O95452 261 aa9.01□□□□□ -0.97
COL6A5-202ENST00000312481 SLC11A2P49281 568 aa9.01□□□□□ -0.97
COL6A5-202ENST00000312481 MICU2Q8IYU8 434 aa9.01□□□□□ -0.97
COL6A5-202ENST00000312481 GLB1L3Q8NCI6 653 aaPredicted RBP9.01□□□□□ -0.97
COL6A5-202ENST00000312481 PEX13Q92968 403 aa9.01□□□□□ -0.97
COL6A5-202ENST00000312481 MTERF3Q96E29 417 aa9.01□□□□□ -0.97
COL6A5-202ENST00000312481 AAASQ9NRG9 546 aa9.01□□□□□ -0.97
COL6A5-202ENST00000312481 MAGEL2Q9UJ55 1249 aa9.01□□□□□ -0.97
COL6A5-202ENST00000312481 GINS2Q9Y248 185 aa9.01□□□□□ -0.97
COL6A5-202ENST00000312481 RAP2CQ9Y3L5 183 aa9.01□□□□□ -0.97
COL6A5-202ENST00000312481 MGRN1O60291 552 aa9.01□□□□□ -0.97
COL6A5-202ENST00000312481 LZTS3O60299 673 aaPredicted RBP9.01□□□□□ -0.97
COL6A5-202ENST00000312481 SUPT20HL2P0C7V6 817 aa9.01□□□□□ -0.97
COL6A5-202ENST00000312481 RPL14P50914 215 aaKnown RBP9.01□□□□□ -0.97
COL6A5-202ENST00000312481 PLOD1Q02809 727 aaPredicted RBP9.01□□□□□ -0.97
COL6A5-202ENST00000312481 POLD3Q15054 466 aaPredicted RBP9.01□□□□□ -0.97
COL6A5-202ENST00000312481 LIPMQ5VYY2 423 aa9.01□□□□□ -0.97
COL6A5-202ENST00000312481 UHMK1Q8TAS1 419 aaKnown RBP9.01□□□□□ -0.97
COL6A5-202ENST00000312481 DNAJC28Q9NX36 388 aa9.01□□□□□ -0.97
COL6A5-202ENST00000312481 H2AFY2Q9P0M6 372 aaPredicted RBP9.01□□□□□ -0.97
COL6A5-202ENST00000312481 PSMD13Q9UNM6 376 aa9.01□□□□□ -0.97
COL6A5-202ENST00000312481 GSTK1Q9Y2Q3 226 aa9.01□□□□□ -0.97
COL6A5-202ENST00000312481 UNCXA6NJT0 531 aa9□□□□□ -0.97
COL6A5-202ENST00000312481 SLC9A1P19634 815 aa9□□□□□ -0.97
COL6A5-202ENST00000312481 SULT1E1P49888 294 aa9□□□□□ -0.97
COL6A5-202ENST00000312481 AQP5P55064 265 aa9□□□□□ -0.97
COL6A5-202ENST00000312481 PTGES3Q15185 160 aaKnown RBP9□□□□□ -0.97
COL6A5-202ENST00000312481 METTL7BQ6UX53 244 aa9□□□□□ -0.97
COL6A5-202ENST00000312481 PI16Q6UXB8 463 aa9□□□□□ -0.97
COL6A5-202ENST00000312481 SPICE1Q8N0Z3 855 aa9□□□□□ -0.97
COL6A5-202ENST00000312481 FBXO36Q8NEA4 188 aa9□□□□□ -0.97
COL6A5-202ENST00000312481 IFT80Q9P2H3 777 aaPredicted RBP9□□□□□ -0.97
COL6A5-202ENST00000312481 SLC16A2P36021 539 aa9□□□□□ -0.97
COL6A5-202ENST00000312481 ERICH5Q6P6B1 374 aa9□□□□□ -0.97
COL6A5-202ENST00000312481 XKRXQ6PP77 449 aa9□□□□□ -0.97
COL6A5-202ENST00000312481 C18orf25Q96B23 403 aaPredicted RBP9□□□□□ -0.97
COL6A5-202ENST00000312481 TLCD1Q96CP7 247 aa9□□□□□ -0.97
COL6A5-202ENST00000312481 EEF2KMTQ96G04 330 aa9□□□□□ -0.97
COL6A5-202ENST00000312481 TMEM176AQ96HP8 235 aa9□□□□□ -0.97
COL6A5-202ENST00000312481 SENP6Q9GZR1 1112 aaPredicted RBP9□□□□□ -0.97
COL6A5-202ENST00000312481 ARIH1Q9Y4X5 557 aaPredicted RBP9□□□□□ -0.97
COL6A5-202ENST00000312481 ACKR2O00590 384 aa9□□□□□ -0.97
COL6A5-202ENST00000312481 ENO3P13929 434 aaPredicted RBP9□□□□□ -0.97
COL6A5-202ENST00000312481 ADCY1Q08828 1119 aa9□□□□□ -0.97
COL6A5-202ENST00000312481 ZNF211Q13398 564 aaPredicted RBP9□□□□□ -0.97
COL6A5-202ENST00000312481 BLMHQ13867 455 aa9□□□□□ -0.97
COL6A5-202ENST00000312481 IZUMO2Q6UXV1 221 aa9□□□□□ -0.97
COL6A5-202ENST00000312481 NSMCE2Q96MF7 247 aa9□□□□□ -0.97
COL6A5-202ENST00000312481 CLEC4MQ9H2X3 399 aaPredicted RBP9□□□□□ -0.97
COL6A5-202ENST00000312481 NEK6Q9HC98 313 aa9□□□□□ -0.97
COL6A5-202ENST00000312481 RGS18Q9NS28 235 aa9□□□□□ -0.97
COL6A5-202ENST00000312481 VPS51Q9UID3 782 aa9□□□□□ -0.97
COL6A5-202ENST00000312481 HDAC3O15379 428 aa9□□□□□ -0.97
COL6A5-202ENST00000312481 DRD4P21917 467 aa9□□□□□ -0.97
COL6A5-202ENST00000312481 FBXO43Q4G163 708 aa9□□□□□ -0.97
COL6A5-202ENST00000312481 R3HCC1LQ7Z5L2 792 aaKnown RBP9□□□□□ -0.97
COL6A5-202ENST00000312481 ADAMTSL2Q86TH1 951 aa9□□□□□ -0.97
COL6A5-202ENST00000312481 SPATA2LQ8IUW3 424 aaPredicted RBP9□□□□□ -0.97
COL6A5-202ENST00000312481 RNF149Q8NC42 400 aa9□□□□□ -0.97
COL6A5-202ENST00000312481 PCDHA11Q9Y5I1 949 aa9□□□□□ -0.97
COL6A5-202ENST00000312481 A0A088AWK7 358 aa9□□□□□ -0.97
COL6A5-202ENST00000312481 SPDYE2BA6NHP3 402 aa9□□□□□ -0.97
COL6A5-202ENST00000312481 FSCN2O14926 492 aa9□□□□□ -0.97
COL6A5-202ENST00000312481 RAD51BO15315 384 aa9□□□□□ -0.97
COL6A5-202ENST00000312481 ZW10O43264 779 aa9□□□□□ -0.97
COL6A5-202ENST00000312481 SPDYE6P0CI01 402 aa9□□□□□ -0.97
COL6A5-202ENST00000312481 UQCRBP14927 111 aa9□□□□□ -0.97
COL6A5-202ENST00000312481 ZNF10P21506 573 aaPredicted RBP9□□□□□ -0.97
COL6A5-202ENST00000312481 MTDHQ86UE4 582 aaKnown RBP9□□□□□ -0.97
COL6A5-202ENST00000312481 PROCA1Q8NCQ7 364 aaPredicted RBP9□□□□□ -0.97
COL6A5-202ENST00000312481 BAP1Q92560 729 aa9□□□□□ -0.97
COL6A5-202ENST00000312481 ASIC4Q96FT7 647 aa9□□□□□ -0.97
COL6A5-202ENST00000312481 OTUD5Q96G74 571 aa9□□□□□ -0.97
COL6A5-202ENST00000312481 XRN2Q9H0D6 950 aaKnown RBP eCLIP9□□□□□ -0.97
COL6A5-202ENST00000312481 CYP4F11Q9HBI6 524 aa9□□□□□ -0.97
COL6A5-202ENST00000312481 FAM217BQ9NTX9 383 aaPredicted RBP9□□□□□ -0.97
COL6A5-202ENST00000312481 TCP10L2B9ZVM9 353 aa9□□□□□ -0.97
COL6A5-202ENST00000312481 TAF4O00268 1085 aa9□□□□□ -0.97
COL6A5-202ENST00000312481 TTPAP49638 278 aa9□□□□□ -0.97
COL6A5-202ENST00000312481 PPIDQ08752 370 aaKnown RBP9□□□□□ -0.97
COL6A5-202ENST00000312481 FAM189A2Q15884 450 aa9□□□□□ -0.97
COL6A5-202ENST00000312481 CDO1Q16878 200 aa9□□□□□ -0.97
COL6A5-202ENST00000312481 DPY19L1Q2PZI1 675 aa9□□□□□ -0.97
COL6A5-202ENST00000312481 PABPC1LQ4VXU2 614 aaKnown RBP9□□□□□ -0.97
COL6A5-202ENST00000312481 SMARCD1Q96GM5 515 aa9□□□□□ -0.97
COL6A5-202ENST00000312481 FAM111AQ96PZ2 611 aa9□□□□□ -0.97
COL6A5-202ENST00000312481 RIBC2Q9H4K1 309 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms