RNA–Protein interactions for RNA: ENST00000310397.12

SNED1-201, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SNED1, Length 8,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-201ENST00000310397 TBKBP1A7MCY6 615 aa13.43□□□□□ -0.26
SNED1-201ENST00000310397 TK2O00142 265 aa13.43□□□□□ -0.26
SNED1-201ENST00000310397 PLIN5Q00G26 463 aa13.43□□□□□ -0.26
SNED1-201ENST00000310397 FBXO39Q8N4B4 442 aa13.43□□□□□ -0.26
SNED1-201ENST00000310397 ATG4CQ96DT6 458 aa13.43□□□□□ -0.26
SNED1-201ENST00000310397 APOL2Q9BQE5 337 aa13.43□□□□□ -0.26
SNED1-201ENST00000310397 F5H5T6 163 aa13.43□□□□□ -0.26
SNED1-201ENST00000310397 TRIM71Q2Q1W2 868 aaKnown RBP13.43□□□□□ -0.26
SNED1-201ENST00000310397 KCNT2Q6UVM3 1135 aa13.43□□□□□ -0.26
SNED1-201ENST00000310397 COQ7Q99807 217 aa13.43□□□□□ -0.26
SNED1-201ENST00000310397 ATRNO75882 1429 aa13.43□□□□□ -0.26
SNED1-201ENST00000310397 ADAMTS13Q76LX8 1427 aa13.43□□□□□ -0.26
SNED1-201ENST00000310397 KIF1AQ12756 1690 aa13.43□□□□□ -0.26
SNED1-201ENST00000310397 FAM86B1E9PN63 330 aa13.43□□□□□ -0.26
SNED1-201ENST00000310397 MICAL2O94851 1124 aa13.43□□□□□ -0.26
SNED1-201ENST00000310397 RPLP2P05387 115 aaKnown RBP13.43□□□□□ -0.26
SNED1-201ENST00000310397 FAM86B2P0C5J1 330 aa13.43□□□□□ -0.26
SNED1-201ENST00000310397 NEK3P51956 506 aa13.43□□□□□ -0.26
SNED1-201ENST00000310397 MAMLD1Q13495 774 aa13.43□□□□□ -0.26
SNED1-201ENST00000310397 ADCK2Q7Z695 626 aa13.43□□□□□ -0.26
SNED1-201ENST00000310397 DNERQ8NFT8 737 aa13.43□□□□□ -0.26
SNED1-201ENST00000310397 ITFG1Q8TB96 612 aa13.43□□□□□ -0.26
SNED1-201ENST00000310397 ELOVL6Q9H5J4 265 aa13.43□□□□□ -0.26
SNED1-201ENST00000310397 SYNPO2Q9UMS6 1093 aa13.43□□□□□ -0.26
SNED1-201ENST00000310397 FER1L4A9Z1Z3 1794 aa13.43□□□□□ -0.26
SNED1-201ENST00000310397 SFSWAPQ12872 951 aaKnown RBP13.43□□□□□ -0.26
SNED1-201ENST00000310397 TMEM139Q8IV31 216 aa13.43□□□□□ -0.26
SNED1-201ENST00000310397 OR7A2PQ8NGA2 310 aa13.43□□□□□ -0.26
SNED1-201ENST00000310397 DGCR14Q96DF8 476 aaKnown RBP13.43□□□□□ -0.26
SNED1-201ENST00000310397 ASB7Q9H672 318 aa13.43□□□□□ -0.26
SNED1-201ENST00000310397 PLGRKTQ9HBL7 147 aa13.43□□□□□ -0.26
SNED1-201ENST00000310397 CLCA2Q9UQC9 943 aa13.43□□□□□ -0.26
SNED1-201ENST00000310397 PCDHA11Q9Y5I1 949 aa13.43□□□□□ -0.26
SNED1-201ENST00000310397 FAM20BO75063 409 aa13.42□□□□□ -0.26
SNED1-201ENST00000310397 RPS12P25398 132 aaKnown RBP13.42□□□□□ -0.26
SNED1-201ENST00000310397 LAMTOR4Q0VGL1 99 aa13.42□□□□□ -0.26
SNED1-201ENST00000310397 ITPK1Q13572 414 aa13.42□□□□□ -0.26
SNED1-201ENST00000310397 POLNQ7Z5Q5 900 aa13.42□□□□□ -0.26
SNED1-201ENST00000310397 ACTRT2Q8TDY3 377 aa13.42□□□□□ -0.26
SNED1-201ENST00000310397 S100ZQ8WXG8 99 aa13.42□□□□□ -0.26
SNED1-201ENST00000310397 RPRD1AQ96P16 312 aaPredicted RBP13.42□□□□□ -0.26
SNED1-201ENST00000310397 ZCWPW1Q9H0M4 648 aa13.42□□□□□ -0.26
SNED1-201ENST00000310397 ACSS3Q9H6R3 686 aa13.42□□□□□ -0.26
SNED1-201ENST00000310397 POLE3Q9NRF9 147 aa13.42□□□□□ -0.26
SNED1-201ENST00000310397 NCF1BA6NI72 391 aaPredicted RBP13.42□□□□□ -0.26
SNED1-201ENST00000310397 NCF1CA8MVU1 366 aaPredicted RBP13.42□□□□□ -0.26
SNED1-201ENST00000310397 B3GAT3O94766 335 aa13.42□□□□□ -0.26
SNED1-201ENST00000310397 NCF1P14598 390 aaPredicted RBP13.42□□□□□ -0.26
SNED1-201ENST00000310397 KPNA1P52294 538 aaPredicted RBP13.42□□□□□ -0.26
SNED1-201ENST00000310397 SNAPC2Q13487 334 aa13.42□□□□□ -0.26
SNED1-201ENST00000310397 INTS5Q6P9B9 1019 aaKnown RBP13.42□□□□□ -0.26
SNED1-201ENST00000310397 TMC7Q7Z402 723 aa13.42□□□□□ -0.26
SNED1-201ENST00000310397 TMEM132CQ8N3T6 1108 aa13.42□□□□□ -0.26
SNED1-201ENST00000310397 PNPLA3Q9NST1 481 aa13.42□□□□□ -0.26
SNED1-201ENST00000310397 CYB561D2O14569 222 aa13.42□□□□□ -0.26
SNED1-201ENST00000310397 TPP1O14773 563 aa13.42□□□□□ -0.26
SNED1-201ENST00000310397 MFN2O95140 757 aa13.42□□□□□ -0.26
SNED1-201ENST00000310397 ASMTLO95671 621 aa13.42□□□□□ -0.26
SNED1-201ENST00000310397 ORC1Q13415 861 aa13.42□□□□□ -0.26
SNED1-201ENST00000310397 ZCCHC23Q6ZST2 131 aa13.42□□□□□ -0.26
SNED1-201ENST00000310397 RASGEF1CQ8N431 466 aa13.42□□□□□ -0.26
SNED1-201ENST00000310397 AGBL3Q8NEM8 1001 aa13.42□□□□□ -0.26
SNED1-201ENST00000310397 CAMKK2Q96RR4 588 aa13.42□□□□□ -0.26
SNED1-201ENST00000310397 SEPT5Q99719 369 aaPredicted RBP13.42□□□□□ -0.26
SNED1-201ENST00000310397 FICDQ9BVA6 458 aa13.42□□□□□ -0.26
SNED1-201ENST00000310397 RBM22Q9NW64 420 aaKnown RBP eCLIP13.42□□□□□ -0.26
SNED1-201ENST00000310397 PGS1Q32NB8 556 aa13.42□□□□□ -0.26
SNED1-201ENST00000310397 IRF2BP2Q7Z5L9 587 aa13.42□□□□□ -0.26
SNED1-201ENST00000310397 C8orf59Q8N0T1 100 aaPredicted RBP13.42□□□□□ -0.26
SNED1-201ENST00000310397 ZBED2Q9BTP6 218 aa13.42□□□□□ -0.26
SNED1-201ENST00000310397 ANAPC2Q9UJX6 822 aa13.42□□□□□ -0.26
SNED1-201ENST00000310397 PTGES3LE9PB15 166 aa13.42□□□□□ -0.26
SNED1-201ENST00000310397 PSMD12O00232 456 aaPredicted RBP13.42□□□□□ -0.26
SNED1-201ENST00000310397 KLRK1P26718 216 aa13.42□□□□□ -0.26
SNED1-201ENST00000310397 TPP2P29144 1249 aaPredicted RBP13.42□□□□□ -0.26
SNED1-201ENST00000310397 MARSP56192 900 aaKnown RBP13.42□□□□□ -0.26
SNED1-201ENST00000310397 FBXO47Q5MNV8 452 aa13.42□□□□□ -0.26
SNED1-201ENST00000310397 C1orf186Q6ZWK4 172 aa13.42□□□□□ -0.26
SNED1-201ENST00000310397 APBA2Q99767 749 aa13.42□□□□□ -0.26
SNED1-201ENST00000310397 FAM220BPB1ANY3 271 aa13.42□□□□□ -0.26
SNED1-201ENST00000310397 MGAT5BQ3V5L5 792 aa13.42□□□□□ -0.26
SNED1-201ENST00000310397 RSBN1Q5VWQ0 802 aaPredicted RBP13.42□□□□□ -0.26
SNED1-201ENST00000310397 ST13P5Q8NFI4 369 aaPredicted RBP13.42□□□□□ -0.26
SNED1-201ENST00000310397 OR56A4Q8NGH8 313 aa13.42□□□□□ -0.26
SNED1-201ENST00000310397 DPY30Q9C005 99 aa13.42□□□□□ -0.26
SNED1-201ENST00000310397 MID1IP1Q9NPA3 183 aa13.42□□□□□ -0.26
SNED1-201ENST00000310397 MYOZ2Q9NPC6 264 aa13.42□□□□□ -0.26
SNED1-201ENST00000310397 CLIC5Q9NZA1 410 aa13.42□□□□□ -0.26
SNED1-201ENST00000310397 LCA5LO95447 670 aa13.41□□□□□ -0.26
SNED1-201ENST00000310397 CYP3A4P08684 503 aa13.41□□□□□ -0.26
SNED1-201ENST00000310397 HOXD10P28358 340 aa13.41□□□□□ -0.26
SNED1-201ENST00000310397 CCR1P32246 355 aa13.41□□□□□ -0.26
SNED1-201ENST00000310397 MAGEA10P43363 369 aaPredicted RBP13.41□□□□□ -0.26
SNED1-201ENST00000310397 RAP1GAPP47736 663 aa13.41□□□□□ -0.26
SNED1-201ENST00000310397 BROXQ5VW32 411 aa13.41□□□□□ -0.26
SNED1-201ENST00000310397 TTC30AQ86WT1 665 aa13.41□□□□□ -0.26
SNED1-201ENST00000310397 MAP4K3Q8IVH8 894 aa13.41□□□□□ -0.26
SNED1-201ENST00000310397 FIG4Q92562 907 aa13.41□□□□□ -0.26
SNED1-201ENST00000310397 CDK5RAP1Q96SZ6 601 aaKnown RBP13.41□□□□□ -0.26
SNED1-201ENST00000310397 ETNK2Q9NVF9 386 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms