RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 ABCG4Q9H172 646 aa12.31□□□□□ -0.44
SMIM4-201ENST00000307106 TRPM6Q9BX84 2022 aa12.31□□□□□ -0.44
SMIM4-201ENST00000307106 NBPF19A0A087WUL8 3843 aa12.31□□□□□ -0.44
SMIM4-201ENST00000307106 TBC1D3DA0A087WVF3 549 aa12.3□□□□□ -0.44
SMIM4-201ENST00000307106 TBC1D3IA0A087WXS9 549 aa12.3□□□□□ -0.44
SMIM4-201ENST00000307106 TBC1D3EA0A087X179 549 aa12.3□□□□□ -0.44
SMIM4-201ENST00000307106 TBC1D3KA0A087X1G2 549 aa12.3□□□□□ -0.44
SMIM4-201ENST00000307106 TBC1D3FA6NER0 549 aaPredicted RBP12.3□□□□□ -0.44
SMIM4-201ENST00000307106 TBC1D3LB9A6J9 549 aa12.3□□□□□ -0.44
SMIM4-201ENST00000307106 SUV39H1O43463 412 aa12.3□□□□□ -0.44
SMIM4-201ENST00000307106 C4BPAP04003 597 aaKnown RBP12.3□□□□□ -0.44
SMIM4-201ENST00000307106 GP1BAP07359 652 aa12.3□□□□□ -0.44
SMIM4-201ENST00000307106 TBC1D3HP0C7X1 549 aa12.3□□□□□ -0.44
SMIM4-201ENST00000307106 GP1BBP13224 206 aa12.3□□□□□ -0.44
SMIM4-201ENST00000307106 GOT1P17174 413 aa12.3□□□□□ -0.44
SMIM4-201ENST00000307106 DGKAP23743 735 aa12.3□□□□□ -0.44
SMIM4-201ENST00000307106 ASPAP45381 313 aa12.3□□□□□ -0.44
SMIM4-201ENST00000307106 PSMD8P48556 350 aa12.3□□□□□ -0.44
SMIM4-201ENST00000307106 SGSHP51688 502 aa12.3□□□□□ -0.44
SMIM4-201ENST00000307106 AP3M2P53677 418 aa12.3□□□□□ -0.44
SMIM4-201ENST00000307106 YWHAGP61981 247 aaKnown RBP eCLIP12.3□□□□□ -0.44
SMIM4-201ENST00000307106 OVGP1Q12889 678 aa12.3□□□□□ -0.44
SMIM4-201ENST00000307106 STAT4Q14765 748 aa12.3□□□□□ -0.44
SMIM4-201ENST00000307106 ISXQ2M1V0 245 aa12.3□□□□□ -0.44
SMIM4-201ENST00000307106 SGSM1Q2NKQ1 1148 aa12.3□□□□□ -0.44
SMIM4-201ENST00000307106 ARL13BQ3SXY8 428 aa12.3□□□□□ -0.44
SMIM4-201ENST00000307106 LINC00303Q3SY05 128 aa12.3□□□□□ -0.44
SMIM4-201ENST00000307106 C9orf64Q5T6V5 341 aa12.3□□□□□ -0.44
SMIM4-201ENST00000307106 TBC1D3GQ6DHY5 549 aa12.3□□□□□ -0.44
SMIM4-201ENST00000307106 TBC1D3CQ6IPX1 549 aa12.3□□□□□ -0.44
SMIM4-201ENST00000307106 EPM2AIP1Q7L775 607 aaPredicted RBP12.3□□□□□ -0.44
SMIM4-201ENST00000307106 NELFCDQ8IXH7 590 aa12.3□□□□□ -0.44
SMIM4-201ENST00000307106 TBC1D3Q8IZP1 549 aaPredicted RBP12.3□□□□□ -0.44
SMIM4-201ENST00000307106 SLC46A1Q96NT5 459 aa12.3□□□□□ -0.44
SMIM4-201ENST00000307106 CLIC6Q96NY7 704 aa12.3□□□□□ -0.44
SMIM4-201ENST00000307106 DUSP16Q9BY84 665 aa12.3□□□□□ -0.44
SMIM4-201ENST00000307106 PANK2Q9BZ23 570 aa12.3□□□□□ -0.44
SMIM4-201ENST00000307106 OSBPL2Q9H1P3 480 aa12.3□□□□□ -0.44
SMIM4-201ENST00000307106 STARD5Q9NSY2 213 aa12.3□□□□□ -0.44
SMIM4-201ENST00000307106 UCKL1Q9NWZ5 548 aa12.3□□□□□ -0.44
SMIM4-201ENST00000307106 ARHGAP20Q9P2F6 1191 aa12.3□□□□□ -0.44
SMIM4-201ENST00000307106 STOML2Q9UJZ1 356 aa12.3□□□□□ -0.44
SMIM4-201ENST00000307106 FBXO2Q9UK22 296 aaPredicted RBP12.3□□□□□ -0.44
SMIM4-201ENST00000307106 FLNCQ14315 2725 aa12.3□□□□□ -0.44
SMIM4-201ENST00000307106 A0A087X0B3 334 aa12.29□□□□□ -0.44
SMIM4-201ENST00000307106 A0A1W2PNU3 283 aaPredicted RBP12.29□□□□□ -0.44
SMIM4-201ENST00000307106 LRRIQ3A6PVS8 624 aaPredicted RBP12.29□□□□□ -0.44
SMIM4-201ENST00000307106 EIF5BO60841 1220 aaKnown RBP12.29□□□□□ -0.44
SMIM4-201ENST00000307106 AFPP02771 609 aaKnown RBP12.29□□□□□ -0.44
SMIM4-201ENST00000307106 MYF5P13349 255 aa12.29□□□□□ -0.44
SMIM4-201ENST00000307106 C5AR1P21730 350 aa12.29□□□□□ -0.44
SMIM4-201ENST00000307106 MAT2AP31153 395 aaKnown RBP12.29□□□□□ -0.44
SMIM4-201ENST00000307106 SNRPFP62306 86 aaKnown RBP12.29□□□□□ -0.44
SMIM4-201ENST00000307106 CLN3Q13286 438 aa12.29□□□□□ -0.44
SMIM4-201ENST00000307106 ADGRF1Q5T601 910 aa12.29□□□□□ -0.44
SMIM4-201ENST00000307106 SPOPLQ6IQ16 392 aa12.29□□□□□ -0.44
SMIM4-201ENST00000307106 BRAPQ7Z569 592 aa12.29□□□□□ -0.44
SMIM4-201ENST00000307106 PARD3BQ8TEW8 1205 aa12.29□□□□□ -0.44
SMIM4-201ENST00000307106 TTC17Q96AE7 1141 aa12.29□□□□□ -0.44
SMIM4-201ENST00000307106 MRGPRX3Q96LB0 322 aa12.29□□□□□ -0.44
SMIM4-201ENST00000307106 APOLD1Q96LR9 279 aa12.29□□□□□ -0.44
SMIM4-201ENST00000307106 ARHGAP9Q9BRR9 750 aa12.29□□□□□ -0.44
SMIM4-201ENST00000307106 NT5C1AQ9BXI3 368 aa12.29□□□□□ -0.44
SMIM4-201ENST00000307106 TJP2Q9UDY2 1190 aa12.29□□□□□ -0.44
SMIM4-201ENST00000307106 SRPRBQ9Y5M8 271 aaKnown RBP12.29□□□□□ -0.44
SMIM4-201ENST00000307106 UBE4BO95155 1302 aa12.29□□□□□ -0.44
SMIM4-201ENST00000307106 TLN1Q9Y490 2541 aaKnown RBP12.29□□□□□ -0.44
SMIM4-201ENST00000307106 ZFC3H1O60293 1989 aaKnown RBP12.29□□□□□ -0.44
SMIM4-201ENST00000307106 UNC79Q9P2D8 2635 aa12.28□□□□□ -0.44
SMIM4-201ENST00000307106 TARSL2A2RTX5 802 aaKnown RBP12.28□□□□□ -0.44
SMIM4-201ENST00000307106 CDRT15L2A8MXV6 281 aa12.28□□□□□ -0.44
SMIM4-201ENST00000307106 LZTS3O60299 673 aaPredicted RBP12.28□□□□□ -0.44
SMIM4-201ENST00000307106 EXOC3O60645 756 aa12.28□□□□□ -0.44
SMIM4-201ENST00000307106 TBL1XO60907 577 aa12.28□□□□□ -0.44
SMIM4-201ENST00000307106 ADH1BP00325 375 aa12.28□□□□□ -0.44
SMIM4-201ENST00000307106 ASLP04424 464 aa12.28□□□□□ -0.44
SMIM4-201ENST00000307106 SLFN14P0C7P3 912 aa12.28□□□□□ -0.44
SMIM4-201ENST00000307106 GIMD1P0DJR0 217 aa12.28□□□□□ -0.44
SMIM4-201ENST00000307106 ITGB6P18564 788 aa12.28□□□□□ -0.44
SMIM4-201ENST00000307106 CSKP41240 450 aa12.28□□□□□ -0.44
SMIM4-201ENST00000307106 CLDN10P78369 228 aa12.28□□□□□ -0.44
SMIM4-201ENST00000307106 INCA1Q0VD86 236 aa12.28□□□□□ -0.44
SMIM4-201ENST00000307106 UBAP2LQ14157 1087 aaKnown RBP12.28□□□□□ -0.44
SMIM4-201ENST00000307106 ARID5BQ14865 1188 aa12.28□□□□□ -0.44
SMIM4-201ENST00000307106 PPP1R26Q5T8A7 1209 aaPredicted RBP12.28□□□□□ -0.44
SMIM4-201ENST00000307106 XKR5Q6UX68 686 aa12.28□□□□□ -0.44
SMIM4-201ENST00000307106 C12orf56Q8IXR9 622 aa12.28□□□□□ -0.44
SMIM4-201ENST00000307106 ZNF557Q8N988 423 aaPredicted RBP12.28□□□□□ -0.44
SMIM4-201ENST00000307106 MAPK15Q8TD08 544 aa12.28□□□□□ -0.44
SMIM4-201ENST00000307106 TAF4BQ92750 862 aa12.28□□□□□ -0.44
SMIM4-201ENST00000307106 KLHDC7BQ96G42 594 aa12.28□□□□□ -0.44
SMIM4-201ENST00000307106 ATXN7L3BQ96GX2 97 aa12.28□□□□□ -0.44
SMIM4-201ENST00000307106 PRR11Q96HE9 360 aaPredicted RBP12.28□□□□□ -0.44
SMIM4-201ENST00000307106 CCNL2Q96S94 520 aaPredicted RBP12.28□□□□□ -0.44
SMIM4-201ENST00000307106 FAM129BQ96TA1 746 aa12.28□□□□□ -0.44
SMIM4-201ENST00000307106 OLA1Q9NTK5 396 aaKnown RBP12.28□□□□□ -0.44
SMIM4-201ENST00000307106 EVA1BQ9NVM1 165 aa12.28□□□□□ -0.44
SMIM4-201ENST00000307106 WDR70Q9NW82 654 aa12.28□□□□□ -0.44
SMIM4-201ENST00000307106 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.28□□□□□ -0.44
SMIM4-201ENST00000307106 SFMBT1Q9UHJ3 866 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms