RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 CCDC3Q9BQI4 270 aa12.89□□□□□ -0.35
USP38-201ENST00000307017 NARFQ9UHQ1 456 aa12.89□□□□□ -0.35
USP38-201ENST00000307017 LRRC7Q96NW7 1537 aa12.89□□□□□ -0.35
USP38-201ENST00000307017 C9JVG2 144 aa12.89□□□□□ -0.35
USP38-201ENST00000307017 LIN7AO14910 233 aaPredicted RBP12.89□□□□□ -0.35
USP38-201ENST00000307017 GPR1P46091 355 aa12.89□□□□□ -0.35
USP38-201ENST00000307017 RHOAP61586 193 aa12.89□□□□□ -0.35
USP38-201ENST00000307017 SLC34A1Q06495 639 aa12.89□□□□□ -0.35
USP38-201ENST00000307017 OLFML2AQ68BL7 652 aa12.89□□□□□ -0.35
USP38-201ENST00000307017 APOBEC3FQ8IUX4 373 aaKnown RBP12.89□□□□□ -0.35
USP38-201ENST00000307017 CLPTM1LQ96KA5 538 aa12.89□□□□□ -0.35
USP38-201ENST00000307017 CISHQ9NSE2 258 aa12.89□□□□□ -0.35
USP38-201ENST00000307017 HACL1Q9UJ83 578 aa12.89□□□□□ -0.35
USP38-201ENST00000307017 INVSQ9Y283 1065 aa12.89□□□□□ -0.35
USP38-201ENST00000307017 CKMP06732 381 aa12.89□□□□□ -0.35
USP38-201ENST00000307017 F7P08709 466 aaPredicted RBP12.89□□□□□ -0.35
USP38-201ENST00000307017 TBX2Q13207 712 aaPredicted RBP12.89□□□□□ -0.35
USP38-201ENST00000307017 PFKFB4Q16877 469 aa12.89□□□□□ -0.35
USP38-201ENST00000307017 IER5Q5VY09 327 aa12.89□□□□□ -0.35
USP38-201ENST00000307017 ZNF470Q6ECI4 717 aa12.89□□□□□ -0.35
USP38-201ENST00000307017 OOSP2Q86WS3 158 aa12.89□□□□□ -0.35
USP38-201ENST00000307017 KYQ8NBH2 561 aa12.89□□□□□ -0.35
USP38-201ENST00000307017 RGS18Q9NS28 235 aa12.89□□□□□ -0.35
USP38-201ENST00000307017 RBM22Q9NW64 420 aaKnown RBP eCLIP12.89□□□□□ -0.35
USP38-201ENST00000307017 TTC37Q6PGP7 1564 aa12.89□□□□□ -0.35
USP38-201ENST00000307017 NLRP1Q9C000 1473 aa12.89□□□□□ -0.35
USP38-201ENST00000307017 SMIM31A0A1B0GVY4 71 aa12.89□□□□□ -0.35
USP38-201ENST00000307017 A0A1W2PQJ5 194 aa12.89□□□□□ -0.35
USP38-201ENST00000307017 CLTBP09497 229 aa12.89□□□□□ -0.35
USP38-201ENST00000307017 LINC00032P0C843 101 aa12.89□□□□□ -0.35
USP38-201ENST00000307017 GRK4P32298 578 aa12.89□□□□□ -0.35
USP38-201ENST00000307017 MAGEA10P43363 369 aaPredicted RBP12.89□□□□□ -0.35
USP38-201ENST00000307017 NPTX2P47972 431 aa12.89□□□□□ -0.35
USP38-201ENST00000307017 GIT2Q14161 759 aa12.89□□□□□ -0.35
USP38-201ENST00000307017 GLT6D1Q7Z4J2 308 aa12.89□□□□□ -0.35
USP38-201ENST00000307017 YME1L1Q96TA2 773 aa12.89□□□□□ -0.35
USP38-201ENST00000307017 ATP6AP2A0A1C7CYW4 349 aa12.89□□□□□ -0.35
USP38-201ENST00000307017 MYL12BO14950 172 aa12.89□□□□□ -0.35
USP38-201ENST00000307017 PEX11AO75192 247 aa12.89□□□□□ -0.35
USP38-201ENST00000307017 ATP6AP2O75787 350 aa12.89□□□□□ -0.35
USP38-201ENST00000307017 CHKAP35790 457 aa12.89□□□□□ -0.35
USP38-201ENST00000307017 ALDH7A1P49419 539 aaKnown RBP12.89□□□□□ -0.35
USP38-201ENST00000307017 GSTA3Q16772 222 aa12.89□□□□□ -0.35
USP38-201ENST00000307017 ILDR2Q71H61 639 aa12.89□□□□□ -0.35
USP38-201ENST00000307017 C16orf62Q7Z3J2 963 aa12.89□□□□□ -0.35
USP38-201ENST00000307017 POC5Q8NA72 575 aa12.89□□□□□ -0.35
USP38-201ENST00000307017 A1CFQ9NQ94 594 aaKnown RBP12.89□□□□□ -0.35
USP38-201ENST00000307017 IGSF9BQ9UPX0 1349 aa12.89□□□□□ -0.35
USP38-201ENST00000307017 CLUP10909 449 aa12.88□□□□□ -0.35
USP38-201ENST00000307017 TAF6P49848 677 aa12.88□□□□□ -0.35
USP38-201ENST00000307017 TKFCQ3LXA3 575 aa12.88□□□□□ -0.35
USP38-201ENST00000307017 ATP13A4Q4VNC1 1196 aa12.88□□□□□ -0.35
USP38-201ENST00000307017 FAM98BQ52LJ0 330 aaKnown RBP12.88□□□□□ -0.35
USP38-201ENST00000307017 SDE2Q6IQ49 451 aa12.88□□□□□ -0.35
USP38-201ENST00000307017 NOTUMQ6P988 496 aa12.88□□□□□ -0.35
USP38-201ENST00000307017 FDXACB1Q9BRP7 624 aaPredicted RBP12.88□□□□□ -0.35
USP38-201ENST00000307017 MPP6Q9NZW5 540 aa12.88□□□□□ -0.35
USP38-201ENST00000307017 NDUFAF1Q9Y375 327 aa12.88□□□□□ -0.35
USP38-201ENST00000307017 H3BSH0 61 aa12.88□□□□□ -0.35
USP38-201ENST00000307017 FFAR2O15552 330 aa12.88□□□□□ -0.35
USP38-201ENST00000307017 CD4P01730 458 aa12.88□□□□□ -0.35
USP38-201ENST00000307017 UGT3A1Q6NUS8 523 aa12.88□□□□□ -0.35
USP38-201ENST00000307017 CYP4Z1Q86W10 505 aa12.88□□□□□ -0.35
USP38-201ENST00000307017 ATP6V0D2Q8N8Y2 350 aa12.88□□□□□ -0.35
USP38-201ENST00000307017 ITFG1Q8TB96 612 aa12.88□□□□□ -0.35
USP38-201ENST00000307017 MCRS1Q96EZ8 462 aa12.88□□□□□ -0.35
USP38-201ENST00000307017 CLEC4MQ9H2X3 399 aaPredicted RBP12.88□□□□□ -0.35
USP38-201ENST00000307017 MAT2BQ9NZL9 334 aa12.88□□□□□ -0.35
USP38-201ENST00000307017 A0A087X0B3 334 aa12.88□□□□□ -0.35
USP38-201ENST00000307017 CHRM5P08912 532 aaPredicted RBP12.88□□□□□ -0.35
USP38-201ENST00000307017 ODC1P11926 461 aa12.88□□□□□ -0.35
USP38-201ENST00000307017 ARF4P18085 180 aaPredicted RBP12.88□□□□□ -0.35
USP38-201ENST00000307017 GEMP55040 296 aa12.88□□□□□ -0.35
USP38-201ENST00000307017 MTX3Q5HYI7 312 aa12.88□□□□□ -0.35
USP38-201ENST00000307017 GCNT7Q6ZNI0 430 aa12.88□□□□□ -0.35
USP38-201ENST00000307017 ADGRA1Q86SQ6 560 aa12.88□□□□□ -0.35
USP38-201ENST00000307017 REXO5Q96IC2 774 aaKnown RBP12.88□□□□□ -0.35
USP38-201ENST00000307017 HGH1Q9BTY7 390 aa12.88□□□□□ -0.35
USP38-201ENST00000307017 CHID1Q9BWS9 393 aa12.88□□□□□ -0.35
USP38-201ENST00000307017 CDHR5Q9HBB8 845 aa12.88□□□□□ -0.35
USP38-201ENST00000307017 TPD52L2O43399 206 aaKnown RBP12.88□□□□□ -0.35
USP38-201ENST00000307017 TRAPPC3O43617 180 aa12.88□□□□□ -0.35
USP38-201ENST00000307017 RHOCP08134 193 aa12.88□□□□□ -0.35
USP38-201ENST00000307017 RARAP10276 462 aa12.88□□□□□ -0.35
USP38-201ENST00000307017 CYP20A1Q6UW02 462 aa12.88□□□□□ -0.35
USP38-201ENST00000307017 MFSD7Q6UXD7 560 aa12.88□□□□□ -0.35
USP38-201ENST00000307017 CYP4X1Q8N118 509 aa12.88□□□□□ -0.35
USP38-201ENST00000307017 RIBC1Q8N443 379 aaPredicted RBP12.88□□□□□ -0.35
USP38-201ENST00000307017 CLHC1Q8NHS4 586 aa12.88□□□□□ -0.35
USP38-201ENST00000307017 RORBQ92753 470 aa12.88□□□□□ -0.35
USP38-201ENST00000307017 SETD4Q9NVD3 440 aa12.88□□□□□ -0.35
USP38-201ENST00000307017 CROTQ9UKG9 612 aa12.88□□□□□ -0.35
USP38-201ENST00000307017 VAV1P15498 845 aa12.88□□□□□ -0.35
USP38-201ENST00000307017 CCNA2P20248 432 aa12.88□□□□□ -0.35
USP38-201ENST00000307017 MAN2A2P49641 1150 aa12.88□□□□□ -0.35
USP38-201ENST00000307017 NAB1Q13506 487 aa12.88□□□□□ -0.35
USP38-201ENST00000307017 TAF13Q15543 124 aa12.88□□□□□ -0.35
USP38-201ENST00000307017 SDHAF4Q5VUM1 108 aa12.88□□□□□ -0.35
USP38-201ENST00000307017 C16orf86Q6ZW13 317 aa12.88□□□□□ -0.35
USP38-201ENST00000307017 ZNF366Q8N895 744 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms