RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 STAG3L1P0CL83 205 aa14.96□□□□□ -0.01
PTPN9-201ENST00000306726 CYP2C8P10632 490 aa14.96□□□□□ -0.01
PTPN9-201ENST00000306726 HDCP19113 662 aa14.96□□□□□ -0.01
PTPN9-201ENST00000306726 RALGDSQ12967 914 aa14.96□□□□□ -0.01
PTPN9-201ENST00000306726 DNAL1Q4LDG9 190 aa14.96□□□□□ -0.01
PTPN9-201ENST00000306726 KCTD17Q8N5Z5 321 aa14.96□□□□□ -0.01
PTPN9-201ENST00000306726 PIWIL2Q8TC59 973 aaKnown RBP14.96□□□□□ -0.01
PTPN9-201ENST00000306726 NPAS2Q99743 824 aa14.96□□□□□ -0.01
PTPN9-201ENST00000306726 TRIM8Q9BZR9 551 aa14.96□□□□□ -0.01
PTPN9-201ENST00000306726 IARS2Q9NSE4 1012 aaKnown RBP14.96□□□□□ -0.01
PTPN9-201ENST00000306726 SSX2IPQ9Y2D8 614 aa14.96□□□□□ -0.01
PTPN9-201ENST00000306726 H0YCG3 227 aa14.96□□□□□ -0.01
PTPN9-201ENST00000306726 SIN3BO75182 1162 aa14.96□□□□□ -0.01
PTPN9-201ENST00000306726 RGS20O76081 388 aa14.96□□□□□ -0.01
PTPN9-201ENST00000306726 MOCS2O96007 188 aaPredicted RBP14.96□□□□□ -0.01
PTPN9-201ENST00000306726 GSTA2P09210 222 aa14.96□□□□□ -0.01
PTPN9-201ENST00000306726 IRF9Q00978 393 aa14.96□□□□□ -0.01
PTPN9-201ENST00000306726 FOLH1Q04609 750 aa14.96□□□□□ -0.01
PTPN9-201ENST00000306726 SLC5A9Q2M3M2 681 aa14.96□□□□□ -0.01
PTPN9-201ENST00000306726 C17orf99Q6UX52 265 aa14.96□□□□□ -0.01
PTPN9-201ENST00000306726 FRMD7Q6ZUT3 714 aa14.96□□□□□ -0.01
PTPN9-201ENST00000306726 TRIM42Q8IWZ5 723 aa14.96□□□□□ -0.01
PTPN9-201ENST00000306726 PLD5Q8N7P1 536 aa14.96□□□□□ -0.01
PTPN9-201ENST00000306726 SUDS3Q9H7L9 328 aaPredicted RBP14.96□□□□□ -0.01
PTPN9-201ENST00000306726 MINDY3Q9H8M7 445 aa14.96□□□□□ -0.01
PTPN9-201ENST00000306726 ARHGAP28Q9P2N2 729 aa14.96□□□□□ -0.01
PTPN9-201ENST00000306726 ADAMTS6Q9UKP5 1117 aa14.96□□□□□ -0.01
PTPN9-201ENST00000306726 MUTP22033 750 aa14.95□□□□□ -0.02
PTPN9-201ENST00000306726 MPSTP25325 297 aa14.95□□□□□ -0.02
PTPN9-201ENST00000306726 CCDC15Q0P6D6 951 aa14.95□□□□□ -0.02
PTPN9-201ENST00000306726 TRMT5Q32P41 509 aaKnown RBP14.95□□□□□ -0.02
PTPN9-201ENST00000306726 DHDDSQ86SQ9 333 aa14.95□□□□□ -0.02
PTPN9-201ENST00000306726 NUP93Q8N1F7 819 aa14.95□□□□□ -0.02
PTPN9-201ENST00000306726 ZNF781Q8N8C0 355 aa14.95□□□□□ -0.02
PTPN9-201ENST00000306726 PHF21BQ96EK2 531 aa14.95□□□□□ -0.02
PTPN9-201ENST00000306726 TMEM176AQ96HP8 235 aa14.95□□□□□ -0.02
PTPN9-201ENST00000306726 LENG8Q96PV6 779 aaPredicted RBP14.95□□□□□ -0.02
PTPN9-201ENST00000306726 XPNPEP3Q9NQH7 507 aa14.95□□□□□ -0.02
PTPN9-201ENST00000306726 CHST12Q9NRB3 414 aa14.95□□□□□ -0.02
PTPN9-201ENST00000306726 SNX10Q9Y5X0 201 aa14.95□□□□□ -0.02
PTPN9-201ENST00000306726 TMEM233B4DJY2 109 aa14.95□□□□□ -0.02
PTPN9-201ENST00000306726 HNRNPLP14866 589 aaKnown RBP eCLIP14.95□□□□□ -0.02
PTPN9-201ENST00000306726 EEF1B2P24534 225 aaKnown RBP14.95□□□□□ -0.02
PTPN9-201ENST00000306726 RPS6KA3P51812 740 aa14.95□□□□□ -0.02
PTPN9-201ENST00000306726 LRRC8EQ6NSJ5 796 aa14.95□□□□□ -0.02
PTPN9-201ENST00000306726 PARP8Q8N3A8 854 aa14.95□□□□□ -0.02
PTPN9-201ENST00000306726 GPRASP2Q96D09 838 aa14.95□□□□□ -0.02
PTPN9-201ENST00000306726 PTCD3Q96EY7 689 aaKnown RBP14.95□□□□□ -0.02
PTPN9-201ENST00000306726 SDCBP2Q9H190 292 aa14.95□□□□□ -0.02
PTPN9-201ENST00000306726 R3HDMLQ9H3Y0 253 aa14.95□□□□□ -0.02
PTPN9-201ENST00000306726 PREBQ9HCU5 417 aa14.95□□□□□ -0.02
PTPN9-201ENST00000306726 THEGQ9P2T0 379 aa14.95□□□□□ -0.02
PTPN9-201ENST00000306726 SAC3D1A6NKF1 404 aa14.95□□□□□ -0.02
PTPN9-201ENST00000306726 SIGLEC16A6NMB1 481 aa14.95□□□□□ -0.02
PTPN9-201ENST00000306726 CPA3P15088 417 aa14.95□□□□□ -0.02
PTPN9-201ENST00000306726 KCNA2P16389 499 aa14.95□□□□□ -0.02
PTPN9-201ENST00000306726 VCLP18206 1134 aa14.95□□□□□ -0.02
PTPN9-201ENST00000306726 USP10Q14694 798 aaKnown RBP14.95□□□□□ -0.02
PTPN9-201ENST00000306726 LIN52Q52LA3 116 aa14.95□□□□□ -0.02
PTPN9-201ENST00000306726 PMF1Q6P1K2 205 aa14.95□□□□□ -0.02
PTPN9-201ENST00000306726 NKD2Q969F2 451 aaPredicted RBP14.95□□□□□ -0.02
PTPN9-201ENST00000306726 RCN3Q96D15 328 aa14.95□□□□□ -0.02
PTPN9-201ENST00000306726 FOXP3Q9BZS1 431 aa14.95□□□□□ -0.02
PTPN9-201ENST00000306726 PORCNQ9H237 461 aa14.95□□□□□ -0.02
PTPN9-201ENST00000306726 GOLGA2P5Q9HBQ8 144 aa14.95□□□□□ -0.02
PTPN9-201ENST00000306726 ZNF212Q9UDV6 495 aa14.95□□□□□ -0.02
PTPN9-201ENST00000306726 PCDHGB4Q9UN71 923 aa14.95□□□□□ -0.02
PTPN9-201ENST00000306726 PCDHGB5Q9Y5G0 923 aa14.95□□□□□ -0.02
PTPN9-201ENST00000306726 SPTLC1O15269 473 aa14.94□□□□□ -0.02
PTPN9-201ENST00000306726 BUD23O43709 281 aaKnown RBP14.94□□□□□ -0.02
PTPN9-201ENST00000306726 ZNF286BP0CG31 522 aa14.94□□□□□ -0.02
PTPN9-201ENST00000306726 SLC12A2P55011 1212 aa14.94□□□□□ -0.02
PTPN9-201ENST00000306726 FCGRTP55899 365 aa14.94□□□□□ -0.02
PTPN9-201ENST00000306726 DBN1Q16643 649 aa14.94□□□□□ -0.02
PTPN9-201ENST00000306726 XYLT1Q86Y38 959 aa14.94□□□□□ -0.02
PTPN9-201ENST00000306726 PCDH19Q8TAB3 1148 aa14.94□□□□□ -0.02
PTPN9-201ENST00000306726 SREK1Q8WXA9 508 aaKnown RBP14.94□□□□□ -0.02
PTPN9-201ENST00000306726 SLCO2A1Q92959 643 aa14.94□□□□□ -0.02
PTPN9-201ENST00000306726 RNF157Q96PX1 679 aa14.94□□□□□ -0.02
PTPN9-201ENST00000306726 CCDC167Q9P0B6 97 aa14.94□□□□□ -0.02
PTPN9-201ENST00000306726 DOLKQ9UPQ8 538 aa14.94□□□□□ -0.02
PTPN9-201ENST00000306726 DRG1Q9Y295 367 aaKnown RBP14.94□□□□□ -0.02
PTPN9-201ENST00000306726 ZBBXA8MT70 800 aa14.94□□□□□ -0.02
PTPN9-201ENST00000306726 MAGEB3O15480 346 aa14.94□□□□□ -0.02
PTPN9-201ENST00000306726 TM7SF2O76062 418 aa14.94□□□□□ -0.02
PTPN9-201ENST00000306726 UBA1P22314 1058 aaKnown RBP14.94□□□□□ -0.02
PTPN9-201ENST00000306726 STIP1P31948 543 aaKnown RBP14.94□□□□□ -0.02
PTPN9-201ENST00000306726 NAMPTP43490 491 aa14.94□□□□□ -0.02
PTPN9-201ENST00000306726 CTC1Q2NKJ3 1217 aa14.94□□□□□ -0.02
PTPN9-201ENST00000306726 PPP1R26Q5T8A7 1209 aaPredicted RBP14.94□□□□□ -0.02
PTPN9-201ENST00000306726 CES4AQ5XG92 561 aa14.94□□□□□ -0.02
PTPN9-201ENST00000306726 C12orf56Q8IXR9 622 aa14.94□□□□□ -0.02
PTPN9-201ENST00000306726 GALNT15Q8N3T1 639 aa14.94□□□□□ -0.02
PTPN9-201ENST00000306726 BHLHE22Q8NFJ8 381 aaPredicted RBP14.94□□□□□ -0.02
PTPN9-201ENST00000306726 EDEM1Q92611 657 aa14.94□□□□□ -0.02
PTPN9-201ENST00000306726 OR52B2Q96RD2 323 aa14.94□□□□□ -0.02
PTPN9-201ENST00000306726 PDP2Q9P2J9 529 aa14.94□□□□□ -0.02
PTPN9-201ENST00000306726 AP4E1Q9UPM8 1137 aa14.94□□□□□ -0.02
PTPN9-201ENST00000306726 CCL22O00626 93 aa14.94□□□□□ -0.02
PTPN9-201ENST00000306726 CDH15P55291 814 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms