RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 R3HDMLQ9H3Y0 253 aa5.6□□□□□ -1.51
VPS50-202ENST00000305866 PNPOQ9NVS9 261 aa5.6□□□□□ -1.51
VPS50-202ENST00000305866 SEPT9Q9UHD8 586 aaPredicted RBP5.6□□□□□ -1.51
VPS50-202ENST00000305866 TCEAL9Q9UHQ7 104 aa5.6□□□□□ -1.51
VPS50-202ENST00000305866 BLOC1S6Q9UL45 172 aa5.6□□□□□ -1.51
VPS50-202ENST00000305866 RAB26Q9ULW5 256 aa5.6□□□□□ -1.51
VPS50-202ENST00000305866 PCDHB4Q9Y5E5 795 aa5.6□□□□□ -1.51
VPS50-202ENST00000305866 ST14Q9Y5Y6 855 aa5.6□□□□□ -1.51
VPS50-202ENST00000305866 TRIM49D1C9J1S8 452 aa5.6□□□□□ -1.51
VPS50-202ENST00000305866 DDX39AO00148 427 aaKnown RBP5.6□□□□□ -1.51
VPS50-202ENST00000305866 MAP3K7O43318 606 aa5.6□□□□□ -1.51
VPS50-202ENST00000305866 ENO1P06733 434 aaKnown RBP5.6□□□□□ -1.51
VPS50-202ENST00000305866 CCDC166P0CW27 439 aa5.6□□□□□ -1.51
VPS50-202ENST00000305866 PTPN1P18031 435 aaKnown RBP5.6□□□□□ -1.51
VPS50-202ENST00000305866 ACAT1P24752 427 aaKnown RBP5.6□□□□□ -1.51
VPS50-202ENST00000305866 POLR2BP30876 1174 aaKnown RBP5.6□□□□□ -1.51
VPS50-202ENST00000305866 MAGEA8P43361 318 aa5.6□□□□□ -1.51
VPS50-202ENST00000305866 MAGEA10P43363 369 aaPredicted RBP5.6□□□□□ -1.51
VPS50-202ENST00000305866 NR2C2P49116 596 aa5.6□□□□□ -1.51
VPS50-202ENST00000305866 MTM1Q13496 603 aa5.6□□□□□ -1.51
VPS50-202ENST00000305866 TSNAXIP1Q2TAA8 658 aa5.6□□□□□ -1.51
VPS50-202ENST00000305866 SMTNL2Q2TAL5 461 aa5.6□□□□□ -1.51
VPS50-202ENST00000305866 EFHC1Q5JVL4 640 aa5.6□□□□□ -1.51
VPS50-202ENST00000305866 ZCCHC23Q6ZST2 131 aa5.6□□□□□ -1.51
VPS50-202ENST00000305866 SLC35F5Q8WV83 523 aa5.6□□□□□ -1.51
VPS50-202ENST00000305866 LENG1Q96BZ8 264 aaPredicted RBP5.6□□□□□ -1.51
VPS50-202ENST00000305866 HAUS1Q96CS2 278 aa5.6□□□□□ -1.51
VPS50-202ENST00000305866 DCUN1D1Q96GG9 259 aa5.6□□□□□ -1.51
VPS50-202ENST00000305866 EBNA1BP2Q99848 306 aaKnown RBP5.6□□□□□ -1.51
VPS50-202ENST00000305866 THAP1Q9NVV9 213 aa5.6□□□□□ -1.51
VPS50-202ENST00000305866 GPRC5DQ9NZD1 345 aa5.6□□□□□ -1.51
VPS50-202ENST00000305866 TCRBV3S1A0A5B6 114 aa5.6□□□□□ -1.51
VPS50-202ENST00000305866 HACD1B0YJ81 288 aa5.6□□□□□ -1.51
VPS50-202ENST00000305866 FBP2O00757 339 aa5.6□□□□□ -1.51
VPS50-202ENST00000305866 ACOX3O15254 700 aa5.6□□□□□ -1.51
VPS50-202ENST00000305866 MAGEB3O15480 346 aa5.6□□□□□ -1.51
VPS50-202ENST00000305866 PHBP35232 272 aa5.6□□□□□ -1.51
VPS50-202ENST00000305866 ARCN1P48444 511 aaKnown RBP5.6□□□□□ -1.51
VPS50-202ENST00000305866 SCNN1BP51168 640 aa5.6□□□□□ -1.51
VPS50-202ENST00000305866 MLLT10P55197 1068 aa5.6□□□□□ -1.51
VPS50-202ENST00000305866 HDAC4P56524 1084 aa5.6□□□□□ -1.51
VPS50-202ENST00000305866 DYNC1I2Q13409 638 aaKnown RBP5.6□□□□□ -1.51
VPS50-202ENST00000305866 ZNF362Q5T0B9 420 aaPredicted RBP5.6□□□□□ -1.51
VPS50-202ENST00000305866 GPAT2Q6NUI2 795 aa5.6□□□□□ -1.51
VPS50-202ENST00000305866 ZNF365Q70YC5 407 aa5.6□□□□□ -1.51
VPS50-202ENST00000305866 UNC93AQ86WB7 457 aa5.6□□□□□ -1.51
VPS50-202ENST00000305866 ARHGAP18Q8N392 663 aa5.6□□□□□ -1.51
VPS50-202ENST00000305866 C1orf127Q8N9H9 656 aa5.6□□□□□ -1.51
VPS50-202ENST00000305866 SMC1BQ8NDV3 1235 aa5.6□□□□□ -1.51
VPS50-202ENST00000305866 CCDC110Q8TBZ0 833 aa5.6□□□□□ -1.51
VPS50-202ENST00000305866 E2F7Q96AV8 911 aa5.6□□□□□ -1.51
VPS50-202ENST00000305866 DTNBP1Q96EV8 351 aa5.6□□□□□ -1.51
VPS50-202ENST00000305866 BIRC8Q96P09 236 aa5.6□□□□□ -1.51
VPS50-202ENST00000305866 OR52B2Q96RD2 323 aa5.6□□□□□ -1.51
VPS50-202ENST00000305866 CCT7Q99832 543 aa5.6□□□□□ -1.51
VPS50-202ENST00000305866 RTKNQ9BST9 563 aa5.6□□□□□ -1.51
VPS50-202ENST00000305866 CNPY3Q9BT09 278 aa5.6□□□□□ -1.51
VPS50-202ENST00000305866 TARS2Q9BW92 718 aaKnown RBP5.6□□□□□ -1.51
VPS50-202ENST00000305866 KLHL4Q9C0H6 718 aa5.6□□□□□ -1.51
VPS50-202ENST00000305866 MUC3BQ9H195 1237 aa5.6□□□□□ -1.51
VPS50-202ENST00000305866 ANLNQ9NQW6 1124 aa5.6□□□□□ -1.51
VPS50-202ENST00000305866 SLC38A7Q9NVC3 462 aa5.6□□□□□ -1.51
VPS50-202ENST00000305866 PRMT7Q9NVM4 692 aaPredicted RBP5.6□□□□□ -1.51
VPS50-202ENST00000305866 GDAP2Q9NXN4 497 aa5.6□□□□□ -1.51
VPS50-202ENST00000305866 IPO11Q9UI26 975 aaKnown RBP5.6□□□□□ -1.51
VPS50-202ENST00000305866 ZNF639Q9UID6 485 aa5.6□□□□□ -1.51
VPS50-202ENST00000305866 PCDHB12Q9Y5F1 795 aa5.6□□□□□ -1.51
VPS50-202ENST00000305866 PCDHGA7Q9Y5G6 932 aa5.6□□□□□ -1.51
VPS50-202ENST00000305866 CAPN8A6NHC0 703 aa5.59□□□□□ -1.51
VPS50-202ENST00000305866 HBP1O60381 514 aa5.59□□□□□ -1.51
VPS50-202ENST00000305866 RNASEH2AO75792 299 aaKnown RBP5.59□□□□□ -1.51
VPS50-202ENST00000305866 COL6A2P12110 1019 aa5.59□□□□□ -1.51
VPS50-202ENST00000305866 GMPSP49915 693 aaPredicted RBP5.59□□□□□ -1.51
VPS50-202ENST00000305866 STAT5BP51692 787 aa5.59□□□□□ -1.51
VPS50-202ENST00000305866 AIF1P55008 147 aa5.59□□□□□ -1.51
VPS50-202ENST00000305866 ADAM17P78536 824 aa5.59□□□□□ -1.51
VPS50-202ENST00000305866 ZNF33AQ06730 810 aa5.59□□□□□ -1.51
VPS50-202ENST00000305866 SEMA3BQ13214 749 aa5.59□□□□□ -1.51
VPS50-202ENST00000305866 BMPR2Q13873 1038 aa5.59□□□□□ -1.51
VPS50-202ENST00000305866 CHI3L2Q15782 390 aa5.59□□□□□ -1.51
VPS50-202ENST00000305866 INSCQ1MX18 579 aa5.59□□□□□ -1.51
VPS50-202ENST00000305866 ZNF792Q3KQV3 632 aa5.59□□□□□ -1.51
VPS50-202ENST00000305866 DNAL1Q4LDG9 190 aa5.59□□□□□ -1.51
VPS50-202ENST00000305866 PPM1LQ5SGD2 360 aa5.59□□□□□ -1.51
VPS50-202ENST00000305866 NCBP2-AS2Q69YL0 99 aa5.59□□□□□ -1.51
VPS50-202ENST00000305866 RFX8Q6ZV50 586 aa5.59□□□□□ -1.51
VPS50-202ENST00000305866 USP51Q70EK9 711 aa5.59□□□□□ -1.51
VPS50-202ENST00000305866 BEND5Q7L4P6 421 aa5.59□□□□□ -1.51
VPS50-202ENST00000305866 ARID3BQ8IVW6 561 aaPredicted RBP5.59□□□□□ -1.51
VPS50-202ENST00000305866 MICALL2Q8IY33 904 aa5.59□□□□□ -1.51
VPS50-202ENST00000305866 GPC2Q8N158 579 aa5.59□□□□□ -1.51
VPS50-202ENST00000305866 CRYBG2Q8N1P7 616 aa5.59□□□□□ -1.51
VPS50-202ENST00000305866 LRRC52Q8N7C0 313 aa5.59□□□□□ -1.51
VPS50-202ENST00000305866 KLHL23Q8NBE8 558 aa5.59□□□□□ -1.51
VPS50-202ENST00000305866 DEPTORQ8TB45 409 aa5.59□□□□□ -1.51
VPS50-202ENST00000305866 PIWIL2Q8TC59 973 aaKnown RBP5.59□□□□□ -1.51
VPS50-202ENST00000305866 SPATA18Q8TC71 538 aa5.59□□□□□ -1.51
VPS50-202ENST00000305866 PYROXD1Q8WU10 500 aa5.59□□□□□ -1.51
VPS50-202ENST00000305866 PRPF31Q8WWY3 499 aaKnown RBP5.59□□□□□ -1.51
VPS50-202ENST00000305866 FATE1Q969F0 183 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms