RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 FGF10O15520 208 aaPredicted RBP14.91□□□□□ -0.02
SHCBP1-201ENST00000303383 URODP06132 367 aa14.91□□□□□ -0.02
SHCBP1-201ENST00000303383 DEFB103AP81534 67 aa14.91□□□□□ -0.02
SHCBP1-201ENST00000303383 TAX1BP1Q86VP1 789 aa14.91□□□□□ -0.02
SHCBP1-201ENST00000303383 ZNF354CQ86Y25 554 aa14.91□□□□□ -0.02
SHCBP1-201ENST00000303383 DEPDC1BQ8WUY9 529 aa14.91□□□□□ -0.02
SHCBP1-201ENST00000303383 DYDC1Q8WWB3 177 aa14.91□□□□□ -0.02
SHCBP1-201ENST00000303383 RABEP2Q9H5N1 569 aa14.91□□□□□ -0.02
SHCBP1-201ENST00000303383 CYP4F11Q9HBI6 524 aa14.91□□□□□ -0.02
SHCBP1-201ENST00000303383 CLIC5Q9NZA1 410 aa14.91□□□□□ -0.02
SHCBP1-201ENST00000303383 TTLL3Q9Y4R7 772 aa14.91□□□□□ -0.02
SHCBP1-201ENST00000303383 LAG3P18627 525 aa14.91□□□□□ -0.02
SHCBP1-201ENST00000303383 TP53INP2Q8IXH6 220 aa14.91□□□□□ -0.02
SHCBP1-201ENST00000303383 ATPAF2Q8N5M1 289 aa14.91□□□□□ -0.02
SHCBP1-201ENST00000303383 CRISPLD1Q9H336 500 aa14.91□□□□□ -0.02
SHCBP1-201ENST00000303383 XAB2Q9HCS7 855 aaKnown RBP14.91□□□□□ -0.02
SHCBP1-201ENST00000303383 PPANQ9NQ55 473 aaKnown RBP14.91□□□□□ -0.02
SHCBP1-201ENST00000303383 SLC38A8A6NNN8 435 aa14.91□□□□□ -0.02
SHCBP1-201ENST00000303383 E7ESA3 106 aa14.91□□□□□ -0.02
SHCBP1-201ENST00000303383 TCEA3O75764 348 aa14.91□□□□□ -0.02
SHCBP1-201ENST00000303383 TBX18O95935 607 aa14.91□□□□□ -0.02
SHCBP1-201ENST00000303383 SOD2P04179 222 aa14.91□□□□□ -0.02
SHCBP1-201ENST00000303383 DNAJB2P25686 324 aa14.91□□□□□ -0.02
SHCBP1-201ENST00000303383 GBP2P32456 591 aaPredicted RBP14.91□□□□□ -0.02
SHCBP1-201ENST00000303383 HTR7P34969 479 aa14.91□□□□□ -0.02
SHCBP1-201ENST00000303383 ALDH1A3P47895 512 aa14.91□□□□□ -0.02
SHCBP1-201ENST00000303383 OTOP2Q7RTS6 562 aa14.91□□□□□ -0.02
SHCBP1-201ENST00000303383 FBF1Q8TES7 1133 aa14.91□□□□□ -0.02
SHCBP1-201ENST00000303383 PPCSQ9HAB8 311 aa14.91□□□□□ -0.02
SHCBP1-201ENST00000303383 SPG21Q9NZD8 308 aa14.91□□□□□ -0.02
SHCBP1-201ENST00000303383 ZC3H7BQ9UGR2 993 aaKnown RBP14.91□□□□□ -0.02
SHCBP1-201ENST00000303383 BACE2Q9Y5Z0 518 aa14.91□□□□□ -0.02
SHCBP1-201ENST00000303383 ADAM12O43184 909 aa14.9□□□□□ -0.02
SHCBP1-201ENST00000303383 TBC1D4O60343 1298 aa14.9□□□□□ -0.02
SHCBP1-201ENST00000303383 TPSB2P20231 275 aa14.9□□□□□ -0.02
SHCBP1-201ENST00000303383 MSH2P43246 934 aa14.9□□□□□ -0.02
SHCBP1-201ENST00000303383 LBX1P52954 281 aa14.9□□□□□ -0.02
SHCBP1-201ENST00000303383 TPSAB1Q15661 275 aa14.9□□□□□ -0.02
SHCBP1-201ENST00000303383 PARP6Q2NL67 630 aa14.9□□□□□ -0.02
SHCBP1-201ENST00000303383 ITPRIPL1Q6GPH6 555 aa14.9□□□□□ -0.02
SHCBP1-201ENST00000303383 SLC8B1Q6J4K2 584 aa14.9□□□□□ -0.02
SHCBP1-201ENST00000303383 MSANTD2Q6P1R3 559 aa14.9□□□□□ -0.02
SHCBP1-201ENST00000303383 TADA2BQ86TJ2 420 aa14.9□□□□□ -0.02
SHCBP1-201ENST00000303383 SRRM1Q8IYB3 904 aaKnown RBP14.9□□□□□ -0.02
SHCBP1-201ENST00000303383 LZTR1Q8N653 840 aa14.9□□□□□ -0.02
SHCBP1-201ENST00000303383 NPWQ8N729 165 aa14.9□□□□□ -0.02
SHCBP1-201ENST00000303383 PDCD7Q8N8D1 485 aaKnown RBP14.9□□□□□ -0.02
SHCBP1-201ENST00000303383 AGAP3Q96P47 875 aa14.9□□□□□ -0.02
SHCBP1-201ENST00000303383 COMMD8Q9NX08 183 aa14.9□□□□□ -0.02
SHCBP1-201ENST00000303383 RSPH14Q9UHP6 348 aa14.9□□□□□ -0.02
SHCBP1-201ENST00000303383 MRPL42Q9Y6G3 142 aaKnown RBP14.9□□□□□ -0.02
SHCBP1-201ENST00000303383 NUP205Q92621 2012 aa14.9□□□□□ -0.02
SHCBP1-201ENST00000303383 RASA4BC9J798 803 aa14.9□□□□□ -0.02
SHCBP1-201ENST00000303383 RASA4O43374 803 aa14.9□□□□□ -0.02
SHCBP1-201ENST00000303383 TLR5O60602 858 aa14.9□□□□□ -0.02
SHCBP1-201ENST00000303383 SPAG6O75602 509 aa14.9□□□□□ -0.02
SHCBP1-201ENST00000303383 PSMB4P28070 264 aa14.9□□□□□ -0.02
SHCBP1-201ENST00000303383 GARSP41250 739 aaKnown RBP14.9□□□□□ -0.02
SHCBP1-201ENST00000303383 VEPH1Q14D04 833 aa14.9□□□□□ -0.02
SHCBP1-201ENST00000303383 ZNF567Q8N184 647 aa14.9□□□□□ -0.02
SHCBP1-201ENST00000303383 MCUQ8NE86 351 aa14.9□□□□□ -0.02
SHCBP1-201ENST00000303383 ZBED2Q9BTP6 218 aa14.9□□□□□ -0.02
SHCBP1-201ENST00000303383 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.9□□□□□ -0.02
SHCBP1-201ENST00000303383 DONSONQ9NYP3 566 aa14.9□□□□□ -0.02
SHCBP1-201ENST00000303383 VANGL2Q9ULK5 521 aa14.9□□□□□ -0.02
SHCBP1-201ENST00000303383 KCNU1A8MYU2 1149 aa14.9□□□□□ -0.02
SHCBP1-201ENST00000303383 E9PAM4 449 aa14.9□□□□□ -0.02
SHCBP1-201ENST00000303383 PRRG1O14668 218 aa14.9□□□□□ -0.02
SHCBP1-201ENST00000303383 GEMIN4P57678 1058 aaKnown RBP14.9□□□□□ -0.02
SHCBP1-201ENST00000303383 PPIDQ08752 370 aaKnown RBP14.9□□□□□ -0.02
SHCBP1-201ENST00000303383 SEMA5AQ13591 1074 aa14.9□□□□□ -0.02
SHCBP1-201ENST00000303383 CTAGE3PQ8IX95 158 aa14.9□□□□□ -0.02
SHCBP1-201ENST00000303383 BCAS4Q8TDM0 211 aa14.9□□□□□ -0.02
SHCBP1-201ENST00000303383 HDAC11Q96DB2 347 aa14.9□□□□□ -0.02
SHCBP1-201ENST00000303383 CYTH2Q99418 400 aa14.9□□□□□ -0.02
SHCBP1-201ENST00000303383 INTS9Q9NV88 658 aaKnown RBP14.9□□□□□ -0.02
SHCBP1-201ENST00000303383 AFF4Q9UHB7 1163 aaKnown RBP14.9□□□□□ -0.02
SHCBP1-201ENST00000303383 HS3ST4Q9Y661 456 aa14.9□□□□□ -0.02
SHCBP1-201ENST00000303383 CARNS1A5YM72 827 aa14.89□□□□□ -0.03
SHCBP1-201ENST00000303383 WDR5P61964 334 aaKnown RBP14.89□□□□□ -0.03
SHCBP1-201ENST00000303383 CDK16Q00536 496 aa14.89□□□□□ -0.03
SHCBP1-201ENST00000303383 NR1H3Q13133 447 aa14.89□□□□□ -0.03
SHCBP1-201ENST00000303383 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.89□□□□□ -0.03
SHCBP1-201ENST00000303383 MDM1Q8TC05 714 aa14.89□□□□□ -0.03
SHCBP1-201ENST00000303383 FAM107BQ9H098 131 aa14.89□□□□□ -0.03
SHCBP1-201ENST00000303383 PSMC3IPQ9P2W1 217 aaPredicted RBP14.89□□□□□ -0.03
SHCBP1-201ENST00000303383 ZNF638Q14966 1978 aaKnown RBP14.89□□□□□ -0.03
SHCBP1-201ENST00000303383 TRIM43BA6NCK2 446 aa14.89□□□□□ -0.03
SHCBP1-201ENST00000303383 SHOX2O60902 331 aaPredicted RBP14.89□□□□□ -0.03
SHCBP1-201ENST00000303383 TSHRP16473 764 aa14.89□□□□□ -0.03
SHCBP1-201ENST00000303383 LSP1P33241 339 aa14.89□□□□□ -0.03
SHCBP1-201ENST00000303383 GPX6P59796 221 aa14.89□□□□□ -0.03
SHCBP1-201ENST00000303383 GALNT2Q10471 571 aa14.89□□□□□ -0.03
SHCBP1-201ENST00000303383 PRPSAP1Q14558 356 aa14.89□□□□□ -0.03
SHCBP1-201ENST00000303383 TRIP4Q15650 581 aaPredicted RBP14.89□□□□□ -0.03
SHCBP1-201ENST00000303383 RASIP1Q5U651 963 aa14.89□□□□□ -0.03
SHCBP1-201ENST00000303383 TRIM43Q96BQ3 446 aaPredicted RBP14.89□□□□□ -0.03
SHCBP1-201ENST00000303383 LRRC39Q96DD0 335 aa14.89□□□□□ -0.03
SHCBP1-201ENST00000303383 CDK5RAP1Q96SZ6 601 aaKnown RBP14.89□□□□□ -0.03
SHCBP1-201ENST00000303383 MPP6Q9NZW5 540 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 398 ms