RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 COG1Q8WTW3 980 aa9.79□□□□□ -0.84
RFX3-201ENST00000302303 IRF7Q92985 503 aa9.79□□□□□ -0.84
RFX3-201ENST00000302303 E2F7Q96AV8 911 aa9.79□□□□□ -0.84
RFX3-201ENST00000302303 RNF157Q96PX1 679 aa9.79□□□□□ -0.84
RFX3-201ENST00000302303 PSMB7Q99436 277 aa9.79□□□□□ -0.84
RFX3-201ENST00000302303 NOL6Q9H6R4 1146 aaKnown RBP9.79□□□□□ -0.84
RFX3-201ENST00000302303 CD320Q9NPF0 282 aa9.79□□□□□ -0.84
RFX3-201ENST00000302303 SPHK2Q9NRA0 654 aa9.79□□□□□ -0.84
RFX3-201ENST00000302303 DDX56Q9NY93 547 aaKnown RBP9.79□□□□□ -0.84
RFX3-201ENST00000302303 MPP6Q9NZW5 540 aa9.79□□□□□ -0.84
RFX3-201ENST00000302303 TBC1D14Q9P2M4 693 aa9.79□□□□□ -0.84
RFX3-201ENST00000302303 PPARGC1AQ9UBK2 798 aaKnown RBP9.79□□□□□ -0.84
RFX3-201ENST00000302303 DNAI1Q9UI46 699 aa9.79□□□□□ -0.84
RFX3-201ENST00000302303 LSM7Q9UK45 103 aaKnown RBP9.79□□□□□ -0.84
RFX3-201ENST00000302303 FBXO10Q9UK96 956 aa9.79□□□□□ -0.84
RFX3-201ENST00000302303 SNX12Q9UMY4 172 aa9.79□□□□□ -0.84
RFX3-201ENST00000302303 ZNF510Q9Y2H8 683 aa9.79□□□□□ -0.84
RFX3-201ENST00000302303 COL4A2P08572 1712 aa9.79□□□□□ -0.84
RFX3-201ENST00000302303 MUC3AQ02505 3323 aa9.79□□□□□ -0.84
RFX3-201ENST00000302303 A0A0C4DFX4 3053 aa9.78□□□□□ -0.84
RFX3-201ENST00000302303 LRRD1A4D1F6 860 aa9.78□□□□□ -0.84
RFX3-201ENST00000302303 WASH4PA8MWX3 477 aa9.78□□□□□ -0.84
RFX3-201ENST00000302303 ZNF185O15231 689 aa9.78□□□□□ -0.84
RFX3-201ENST00000302303 CHADO15335 359 aa9.78□□□□□ -0.84
RFX3-201ENST00000302303 CREB3O43889 395 aa9.78□□□□□ -0.84
RFX3-201ENST00000302303 KRT1P04264 644 aa9.78□□□□□ -0.84
RFX3-201ENST00000302303 CYP17A1P05093 508 aa9.78□□□□□ -0.84
RFX3-201ENST00000302303 ERCC2P18074 760 aa9.78□□□□□ -0.84
RFX3-201ENST00000302303 HOXD9P28356 352 aaPredicted RBP9.78□□□□□ -0.84
RFX3-201ENST00000302303 PTPN7P35236 360 aa9.78□□□□□ -0.84
RFX3-201ENST00000302303 CHKAP35790 457 aa9.78□□□□□ -0.84
RFX3-201ENST00000302303 DNA2P51530 1060 aa9.78□□□□□ -0.84
RFX3-201ENST00000302303 SLC10A2Q12908 348 aaPredicted RBP9.78□□□□□ -0.84
RFX3-201ENST00000302303 MTA1Q13330 715 aa9.78□□□□□ -0.84
RFX3-201ENST00000302303 KLF1Q13351 362 aaPredicted RBP9.78□□□□□ -0.84
RFX3-201ENST00000302303 DHCR24Q15392 516 aa9.78□□□□□ -0.84
RFX3-201ENST00000302303 SIX1Q15475 284 aaPredicted RBP9.78□□□□□ -0.84
RFX3-201ENST00000302303 PPP6R3Q5H9R7 873 aaPredicted RBP9.78□□□□□ -0.84
RFX3-201ENST00000302303 FSCBQ5H9T9 825 aa9.78□□□□□ -0.84
RFX3-201ENST00000302303 NAIF1Q69YI7 327 aaPredicted RBP9.78□□□□□ -0.84
RFX3-201ENST00000302303 SLC9A4Q6AI14 798 aa9.78□□□□□ -0.84
RFX3-201ENST00000302303 CXorf57Q6NSI4 855 aaKnown RBP9.78□□□□□ -0.84
RFX3-201ENST00000302303 RFX8Q6ZV50 586 aa9.78□□□□□ -0.84
RFX3-201ENST00000302303 MTSS1LQ765P7 747 aa9.78□□□□□ -0.84
RFX3-201ENST00000302303 CHSY1Q86X52 802 aa9.78□□□□□ -0.84
RFX3-201ENST00000302303 ADHFE1Q8IWW8 467 aa9.78□□□□□ -0.84
RFX3-201ENST00000302303 RASGEF1CQ8N431 466 aa9.78□□□□□ -0.84
RFX3-201ENST00000302303 NPWQ8N729 165 aa9.78□□□□□ -0.84
RFX3-201ENST00000302303 PLD5Q8N7P1 536 aa9.78□□□□□ -0.84
RFX3-201ENST00000302303 KCTD6Q8NC69 237 aa9.78□□□□□ -0.84
RFX3-201ENST00000302303 DEPDC1BQ8WUY9 529 aa9.78□□□□□ -0.84
RFX3-201ENST00000302303 ATXN2LQ8WWM7 1075 aaKnown RBP9.78□□□□□ -0.84
RFX3-201ENST00000302303 OTUB2Q96DC9 234 aa9.78□□□□□ -0.84
RFX3-201ENST00000302303 ALG14Q96F25 216 aa9.78□□□□□ -0.84
RFX3-201ENST00000302303 MS4A14Q96JA4 679 aa9.78□□□□□ -0.84
RFX3-201ENST00000302303 ASB2Q96Q27 587 aa9.78□□□□□ -0.84
RFX3-201ENST00000302303 OSBPL9Q96SU4 736 aa9.78□□□□□ -0.84
RFX3-201ENST00000302303 ZNF670Q9BS34 389 aa9.78□□□□□ -0.84
RFX3-201ENST00000302303 CARD9Q9H257 536 aa9.78□□□□□ -0.84
RFX3-201ENST00000302303 EBF3Q9H4W6 596 aa9.78□□□□□ -0.84
RFX3-201ENST00000302303 ARHGEF4Q9NR80 690 aa9.78□□□□□ -0.84
RFX3-201ENST00000302303 DUS2Q9NX74 493 aaKnown RBP9.78□□□□□ -0.84
RFX3-201ENST00000302303 PLK2Q9NYY3 685 aa9.78□□□□□ -0.84
RFX3-201ENST00000302303 MARK1Q9P0L2 795 aa9.78□□□□□ -0.84
RFX3-201ENST00000302303 RCOR3Q9P2K3 495 aaPredicted RBP9.78□□□□□ -0.84
RFX3-201ENST00000302303 SLC12A6Q9UHW9 1150 aa9.78□□□□□ -0.84
RFX3-201ENST00000302303 NR2E1Q9Y466 385 aa9.78□□□□□ -0.84
RFX3-201ENST00000302303 DOCK4Q8N1I0 1966 aa9.78□□□□□ -0.84
RFX3-201ENST00000302303 MYOFQ9NZM1 2061 aa9.78□□□□□ -0.84
RFX3-201ENST00000302303 KCNK3O14649 394 aa9.77□□□□□ -0.84
RFX3-201ENST00000302303 TRIM24O15164 1050 aa9.77□□□□□ -0.84
RFX3-201ENST00000302303 NARSO43776 548 aaKnown RBP9.77□□□□□ -0.84
RFX3-201ENST00000302303 CISD3P0C7P0 127 aa9.77□□□□□ -0.84
RFX3-201ENST00000302303 DESP17661 470 aa9.77□□□□□ -0.84
RFX3-201ENST00000302303 EPHB2P29323 1055 aa9.77□□□□□ -0.84
RFX3-201ENST00000302303 GDI1P31150 447 aa9.77□□□□□ -0.84
RFX3-201ENST00000302303 COPS2P61201 443 aa9.77□□□□□ -0.84
RFX3-201ENST00000302303 PPP2R5EQ16537 467 aa9.77□□□□□ -0.84
RFX3-201ENST00000302303 MPP7Q5T2T1 576 aa9.77□□□□□ -0.84
RFX3-201ENST00000302303 ACBD5Q5T8D3 534 aaPredicted RBP9.77□□□□□ -0.84
RFX3-201ENST00000302303 AFMIDQ63HM1 303 aa9.77□□□□□ -0.84
RFX3-201ENST00000302303 NCBP2-AS2Q69YL0 99 aa9.77□□□□□ -0.84
RFX3-201ENST00000302303 TPGS1Q6ZTW0 290 aa9.77□□□□□ -0.84
RFX3-201ENST00000302303 C12orf40Q86WS4 652 aa9.77□□□□□ -0.84
RFX3-201ENST00000302303 CREG2Q8IUH2 290 aa9.77□□□□□ -0.84
RFX3-201ENST00000302303 ARHGAP12Q8IWW6 846 aa9.77□□□□□ -0.84
RFX3-201ENST00000302303 ETFBKMTQ8IXQ9 262 aa9.77□□□□□ -0.84
RFX3-201ENST00000302303 PHTF2Q8N3S3 785 aa9.77□□□□□ -0.84
RFX3-201ENST00000302303 NETO2Q8NC67 525 aa9.77□□□□□ -0.84
RFX3-201ENST00000302303 NXPE3Q969Y0 559 aa9.77□□□□□ -0.84
RFX3-201ENST00000302303 TMA16Q96EY4 203 aaKnown RBP9.77□□□□□ -0.84
RFX3-201ENST00000302303 NAPGQ99747 312 aaPredicted RBP9.77□□□□□ -0.84
RFX3-201ENST00000302303 TRMT61BQ9BVS5 477 aaKnown RBP9.77□□□□□ -0.84
RFX3-201ENST00000302303 HEMGNQ9BXL5 484 aa9.77□□□□□ -0.84
RFX3-201ENST00000302303 CALN1Q9BXU9 219 aa9.77□□□□□ -0.84
RFX3-201ENST00000302303 ZYG11BQ9C0D3 744 aa9.77□□□□□ -0.84
RFX3-201ENST00000302303 ECT2Q9H8V3 914 aa9.77□□□□□ -0.84
RFX3-201ENST00000302303 TMEM248Q9NWD8 314 aa9.77□□□□□ -0.84
RFX3-201ENST00000302303 GTSE1Q9NYZ3 720 aa9.77□□□□□ -0.84
RFX3-201ENST00000302303 SMARCAL1Q9NZC9 954 aa9.77□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms