RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 TBX4P57082 545 aa22.92■■□□□ 1.26
SMAD1-201ENST00000302085 KIAA1841Q6NSI8 718 aa22.92■■□□□ 1.26
SMAD1-201ENST00000302085 LRRC31Q6UY01 552 aa22.92■■□□□ 1.26
SMAD1-201ENST00000302085 C14orf80Q86SX3 495 aa22.92■■□□□ 1.26
SMAD1-201ENST00000302085 SLC39A11Q8N1S5 342 aa22.92■■□□□ 1.26
SMAD1-201ENST00000302085 DEPDC1BQ8WUY9 529 aa22.92■■□□□ 1.26
SMAD1-201ENST00000302085 ARHGEF2Q92974 986 aaKnown RBP22.92■■□□□ 1.26
SMAD1-201ENST00000302085 ZNF558Q96NG5 402 aa22.92■■□□□ 1.26
SMAD1-201ENST00000302085 TMEM51Q9NW97 253 aa22.92■■□□□ 1.26
SMAD1-201ENST00000302085 TBK1Q9UHD2 729 aa22.92■■□□□ 1.26
SMAD1-201ENST00000302085 ACRP10323 421 aa22.91■■□□□ 1.26
SMAD1-201ENST00000302085 MX2P20592 715 aa22.91■■□□□ 1.26
SMAD1-201ENST00000302085 PTPN3P26045 913 aa22.91■■□□□ 1.26
SMAD1-201ENST00000302085 SERPINB6P35237 376 aa22.91■■□□□ 1.26
SMAD1-201ENST00000302085 GARSP41250 739 aaKnown RBP22.91■■□□□ 1.26
SMAD1-201ENST00000302085 PSEN1P49768 467 aa22.91■■□□□ 1.26
SMAD1-201ENST00000302085 WDR5P61964 334 aaKnown RBP22.91■■□□□ 1.26
SMAD1-201ENST00000302085 MAML1Q92585 1016 aa22.91■■□□□ 1.26
SMAD1-201ENST00000302085 HDAC11Q96DB2 347 aa22.91■■□□□ 1.26
SMAD1-201ENST00000302085 CELF6Q96J87 481 aaKnown RBP22.91■■□□□ 1.26
SMAD1-201ENST00000302085 POC1B-GALNT4F8VUJ3 575 aa22.9■■□□□ 1.26
SMAD1-201ENST00000302085 SOD2P04179 222 aa22.9■■□□□ 1.26
SMAD1-201ENST00000302085 ZDHHC11BP0C7U3 371 aa22.9■■□□□ 1.26
SMAD1-201ENST00000302085 HTR7P34969 479 aa22.9■■□□□ 1.26
SMAD1-201ENST00000302085 PHBP35232 272 aa22.9■■□□□ 1.26
SMAD1-201ENST00000302085 GRIA1P42261 906 aa22.9■■□□□ 1.26
SMAD1-201ENST00000302085 MAGEA3P43357 314 aa22.9■■□□□ 1.26
SMAD1-201ENST00000302085 PARP6Q2NL67 630 aa22.9■■□□□ 1.26
SMAD1-201ENST00000302085 TDRPQ86YL5 185 aa22.9■■□□□ 1.26
SMAD1-201ENST00000302085 FBF1Q8TES7 1133 aa22.9■■□□□ 1.26
SMAD1-201ENST00000302085 TBC1D31Q96DN5 1066 aa22.9■■□□□ 1.26
SMAD1-201ENST00000302085 C1orf74Q96LT6 269 aa22.9■■□□□ 1.26
SMAD1-201ENST00000302085 CNOT10Q9H9A5 744 aaKnown RBP22.9■■□□□ 1.26
SMAD1-201ENST00000302085 MRPL42Q9Y6G3 142 aaKnown RBP22.9■■□□□ 1.26
SMAD1-201ENST00000302085 NUP205Q92621 2012 aa22.9■■□□□ 1.26
SMAD1-201ENST00000302085 SEC24AO95486 1093 aa22.9■■□□□ 1.26
SMAD1-201ENST00000302085 SLC2A3P11169 496 aa22.9■■□□□ 1.26
SMAD1-201ENST00000302085 RAG1P15918 1043 aa22.9■■□□□ 1.26
SMAD1-201ENST00000302085 TUBP50607 506 aa22.9■■□□□ 1.26
SMAD1-201ENST00000302085 NRG1Q02297 640 aaPredicted RBP22.9■■□□□ 1.26
SMAD1-201ENST00000302085 PKN2Q16513 984 aaKnown RBP22.9■■□□□ 1.26
SMAD1-201ENST00000302085 PIK3R6Q5UE93 754 aa22.9■■□□□ 1.26
SMAD1-201ENST00000302085 PID1Q7Z2X4 250 aa22.9■■□□□ 1.26
SMAD1-201ENST00000302085 TTLL2Q9BWV7 592 aa22.9■■□□□ 1.26
SMAD1-201ENST00000302085 E9PAM4 449 aa22.89■■□□□ 1.26
SMAD1-201ENST00000302085 CREB1P16220 341 aa22.89■■□□□ 1.26
SMAD1-201ENST00000302085 PSMB4P28070 264 aa22.89■■□□□ 1.26
SMAD1-201ENST00000302085 ATP5DP30049 168 aa22.89■■□□□ 1.26
SMAD1-201ENST00000302085 LSP1P33241 339 aa22.89■■□□□ 1.26
SMAD1-201ENST00000302085 TUFMP49411 452 aaKnown RBP22.89■■□□□ 1.26
SMAD1-201ENST00000302085 BTG3Q14201 252 aaPredicted RBP22.89■■□□□ 1.26
SMAD1-201ENST00000302085 TRIP4Q15650 581 aaPredicted RBP22.89■■□□□ 1.26
SMAD1-201ENST00000302085 C10orf120Q5SQS8 335 aa22.89■■□□□ 1.26
SMAD1-201ENST00000302085 NECAB2Q7Z6G3 386 aa22.89■■□□□ 1.26
SMAD1-201ENST00000302085 RIBC1Q8N443 379 aaPredicted RBP22.89■■□□□ 1.26
SMAD1-201ENST00000302085 SELENOSQ9BQE4 189 aa22.89■■□□□ 1.26
SMAD1-201ENST00000302085 ACSS3Q9H6R3 686 aa22.89■■□□□ 1.26
SMAD1-201ENST00000302085 OLA1Q9NTK5 396 aaKnown RBP22.89■■□□□ 1.26
SMAD1-201ENST00000302085 MARCH2Q9P0N8 246 aa22.89■■□□□ 1.26
SMAD1-201ENST00000302085 IGSF9Q9P2J2 1179 aa22.89■■□□□ 1.26
SMAD1-201ENST00000302085 MAGED2Q9UNF1 606 aaPredicted RBP22.89■■□□□ 1.26
SMAD1-201ENST00000302085 FGF10O15520 208 aaPredicted RBP22.89■■□□□ 1.25
SMAD1-201ENST00000302085 ZNF189O75820 626 aaPredicted RBP22.89■■□□□ 1.25
SMAD1-201ENST00000302085 ABLIM3O94929 683 aa22.89■■□□□ 1.25
SMAD1-201ENST00000302085 DSG1Q02413 1049 aa22.89■■□□□ 1.25
SMAD1-201ENST00000302085 EFTUD2Q15029 972 aaKnown RBP eCLIP22.89■■□□□ 1.25
SMAD1-201ENST00000302085 TAOK1Q7L7X3 1001 aa22.89■■□□□ 1.25
SMAD1-201ENST00000302085 ARHGAP12Q8IWW6 846 aa22.89■■□□□ 1.25
SMAD1-201ENST00000302085 CMTR2Q8IYT2 770 aaKnown RBP22.89■■□□□ 1.25
SMAD1-201ENST00000302085 PDCD7Q8N8D1 485 aaKnown RBP22.89■■□□□ 1.25
SMAD1-201ENST00000302085 DPF3Q92784 378 aa22.89■■□□□ 1.25
SMAD1-201ENST00000302085 SIGLEC10Q96LC7 697 aa22.89■■□□□ 1.25
SMAD1-201ENST00000302085 CATSPERBQ9H7T0 1116 aa22.89■■□□□ 1.25
SMAD1-201ENST00000302085 AFF4Q9UHB7 1163 aaKnown RBP22.89■■□□□ 1.25
SMAD1-201ENST00000302085 ERICH4A6NGS2 130 aa22.88■■□□□ 1.25
SMAD1-201ENST00000302085 TADA2BQ86TJ2 420 aa22.88■■□□□ 1.25
SMAD1-201ENST00000302085 MIB1Q86YT6 1006 aa22.88■■□□□ 1.25
SMAD1-201ENST00000302085 ZNF683Q8IZ20 524 aa22.88■■□□□ 1.25
SMAD1-201ENST00000302085 ZSCAN18Q8TBC5 510 aaPredicted RBP22.88■■□□□ 1.25
SMAD1-201ENST00000302085 TMEM169Q96HH4 297 aa22.88■■□□□ 1.25
SMAD1-201ENST00000302085 HERC2P3Q9BVR0 1158 aa22.88■■□□□ 1.25
SMAD1-201ENST00000302085 UBE2OQ9C0C9 1292 aaKnown RBP22.88■■□□□ 1.25
SMAD1-201ENST00000302085 CCSER2Q9H7U1 834 aa22.88■■□□□ 1.25
SMAD1-201ENST00000302085 PLAC1Q9HBJ0 212 aa22.88■■□□□ 1.25
SMAD1-201ENST00000302085 EIF2B3Q9NR50 452 aaKnown RBP22.88■■□□□ 1.25
SMAD1-201ENST00000302085 MPP6Q9NZW5 540 aa22.88■■□□□ 1.25
SMAD1-201ENST00000302085 KLHL8Q9P2G9 620 aaPredicted RBP22.88■■□□□ 1.25
SMAD1-201ENST00000302085 SLC24A2Q9UI40 661 aa22.88■■□□□ 1.25
SMAD1-201ENST00000302085 KIAA0100Q14667 2235 aaKnown RBP22.88■■□□□ 1.25
SMAD1-201ENST00000302085 MYO18AQ92614 2054 aaKnown RBP22.88■■□□□ 1.25
SMAD1-201ENST00000302085 MTSS1O43312 755 aa22.87■■□□□ 1.25
SMAD1-201ENST00000302085 PIAS1O75925 651 aa22.87■■□□□ 1.25
SMAD1-201ENST00000302085 ATP2A2P16615 1042 aaKnown RBP22.87■■□□□ 1.25
SMAD1-201ENST00000302085 LBX1P52954 281 aa22.87■■□□□ 1.25
SMAD1-201ENST00000302085 GEMIN4P57678 1058 aaKnown RBP22.87■■□□□ 1.25
SMAD1-201ENST00000302085 CDK16Q00536 496 aa22.87■■□□□ 1.25
SMAD1-201ENST00000302085 TMED2Q15363 201 aa22.87■■□□□ 1.25
SMAD1-201ENST00000302085 TMEM199Q8N511 208 aa22.87■■□□□ 1.25
SMAD1-201ENST00000302085 ZNF461Q8TAF7 563 aa22.87■■□□□ 1.25
SMAD1-201ENST00000302085 MRRFQ96E11 262 aaKnown RBP22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms