RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 ATP5HO75947 161 aa22.55■■□□□ 1.2
TPM4-201ENST00000300933 KLC1Q07866 573 aa22.55■■□□□ 1.2
TPM4-201ENST00000300933 TAF1BQ53T94 588 aaPredicted RBP22.55■■□□□ 1.2
TPM4-201ENST00000300933 RNF220Q5VTB9 566 aa22.55■■□□□ 1.2
TPM4-201ENST00000300933 CES3Q6UWW8 571 aa22.55■■□□□ 1.2
TPM4-201ENST00000300933 RFX8Q6ZV50 586 aa22.55■■□□□ 1.2
TPM4-201ENST00000300933 OR10T2Q8NGX3 314 aa22.55■■□□□ 1.2
TPM4-201ENST00000300933 SIGLEC10Q96LC7 697 aa22.55■■□□□ 1.2
TPM4-201ENST00000300933 ANKRD27Q96NW4 1050 aa22.55■■□□□ 1.2
TPM4-201ENST00000300933 OLFM3Q96PB7 478 aa22.55■■□□□ 1.2
TPM4-201ENST00000300933 SLC2A13Q96QE2 648 aa22.55■■□□□ 1.2
TPM4-201ENST00000300933 GIT1Q9Y2X7 761 aa22.55■■□□□ 1.2
TPM4-201ENST00000300933 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.54■■□□□ 1.2
TPM4-201ENST00000300933 WDR27A2RRH5 827 aa22.54■■□□□ 1.2
TPM4-201ENST00000300933 B4GALT3O60512 393 aa22.54■■□□□ 1.2
TPM4-201ENST00000300933 C1QAP02745 245 aa22.54■■□□□ 1.2
TPM4-201ENST00000300933 ERCC2P18074 760 aa22.54■■□□□ 1.2
TPM4-201ENST00000300933 PSMB4P28070 264 aa22.54■■□□□ 1.2
TPM4-201ENST00000300933 PGFP49763 221 aa22.54■■□□□ 1.2
TPM4-201ENST00000300933 OVGP1Q12889 678 aa22.54■■□□□ 1.2
TPM4-201ENST00000300933 LRRC8CQ8TDW0 803 aa22.54■■□□□ 1.2
TPM4-201ENST00000300933 CHST12Q9NRB3 414 aa22.54■■□□□ 1.2
TPM4-201ENST00000300933 KLHL33A6NCF5 533 aa22.54■■□□□ 1.2
TPM4-201ENST00000300933 TRIM49D1C9J1S8 452 aa22.54■■□□□ 1.2
TPM4-201ENST00000300933 HHLA1C9JL84 531 aa22.54■■□□□ 1.2
TPM4-201ENST00000300933 SMAPO00193 183 aa22.54■■□□□ 1.2
TPM4-201ENST00000300933 LTFP02788 710 aa22.54■■□□□ 1.2
TPM4-201ENST00000300933 CSH1P0DML2 217 aa22.54■■□□□ 1.2
TPM4-201ENST00000300933 CSH2P0DML3 217 aa22.54■■□□□ 1.2
TPM4-201ENST00000300933 TSNAXIP1Q2TAA8 658 aa22.54■■□□□ 1.2
TPM4-201ENST00000300933 RFWD3Q6PCD5 774 aa22.54■■□□□ 1.2
TPM4-201ENST00000300933 CD300LGQ6UXG3 332 aa22.54■■□□□ 1.2
TPM4-201ENST00000300933 BANPQ8N9N5 519 aa22.54■■□□□ 1.2
TPM4-201ENST00000300933 PTPRN2Q92932 1015 aa22.54■■□□□ 1.2
TPM4-201ENST00000300933 FAM111AQ96PZ2 611 aa22.54■■□□□ 1.2
TPM4-201ENST00000300933 TSPAN18Q96SJ8 248 aa22.54■■□□□ 1.2
TPM4-201ENST00000300933 TOP3BO95985 862 aaKnown RBP22.54■■□□□ 1.2
TPM4-201ENST00000300933 ALDH3A1P30838 453 aa22.54■■□□□ 1.2
TPM4-201ENST00000300933 RAB27AP51159 221 aa22.54■■□□□ 1.2
TPM4-201ENST00000300933 CDHR3Q6ZTQ4 885 aa22.54■■□□□ 1.2
TPM4-201ENST00000300933 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP22.54■■□□□ 1.2
TPM4-201ENST00000300933 SLC13A1Q9BZW2 595 aa22.54■■□□□ 1.2
TPM4-201ENST00000300933 SENP1Q9P0U3 644 aa22.54■■□□□ 1.2
TPM4-201ENST00000300933 TLL2Q9Y6L7 1015 aa22.54■■□□□ 1.2
TPM4-201ENST00000300933 H3BRJ5 948 aa22.53■■□□□ 1.2
TPM4-201ENST00000300933 NPWQ8N729 165 aa22.53■■□□□ 1.2
TPM4-201ENST00000300933 ZNF75CPQ92670 426 aaPredicted RBP22.53■■□□□ 1.2
TPM4-201ENST00000300933 INPP5DQ92835 1189 aa22.53■■□□□ 1.2
TPM4-201ENST00000300933 PHACTR1Q9C0D0 580 aa22.53■■□□□ 1.2
TPM4-201ENST00000300933 LPXNO60711 386 aa22.53■■□□□ 1.2
TPM4-201ENST00000300933 DCTN3O75935 186 aa22.53■■□□□ 1.2
TPM4-201ENST00000300933 PDK4Q16654 411 aa22.53■■□□□ 1.2
TPM4-201ENST00000300933 KHDC1Q4VXA5 237 aaKnown RBP22.53■■□□□ 1.2
TPM4-201ENST00000300933 MROH9Q5TGP6 573 aa22.53■■□□□ 1.2
TPM4-201ENST00000300933 BHLHA9Q7RTU4 235 aa22.53■■□□□ 1.2
TPM4-201ENST00000300933 LRRC6Q86X45 466 aa22.53■■□□□ 1.2
TPM4-201ENST00000300933 TMEM86AQ8N2M4 240 aa22.53■■□□□ 1.2
TPM4-201ENST00000300933 TTC17Q96AE7 1141 aa22.53■■□□□ 1.2
TPM4-201ENST00000300933 TRPV6Q9H1D0 765 aa22.53■■□□□ 1.2
TPM4-201ENST00000300933 UPF3AQ9H1J1 476 aaKnown RBP22.53■■□□□ 1.2
TPM4-201ENST00000300933 CDH9Q9ULB4 789 aa22.53■■□□□ 1.2
TPM4-201ENST00000300933 A0A0A0MRY4 1105 aa22.52■■□□□ 1.2
TPM4-201ENST00000300933 A0A0U1RQF3 1178 aa22.52■■□□□ 1.2
TPM4-201ENST00000300933 TM4SF4P48230 202 aa22.52■■□□□ 1.2
TPM4-201ENST00000300933 ITGA7Q13683 1181 aa22.52■■□□□ 1.2
TPM4-201ENST00000300933 CCDC6Q16204 474 aa22.52■■□□□ 1.2
TPM4-201ENST00000300933 PID1Q7Z2X4 250 aa22.52■■□□□ 1.2
TPM4-201ENST00000300933 ZNF567Q8N184 647 aa22.52■■□□□ 1.2
TPM4-201ENST00000300933 RNF34Q969K3 372 aa22.52■■□□□ 1.2
TPM4-201ENST00000300933 CELF6Q96J87 481 aaKnown RBP22.52■■□□□ 1.2
TPM4-201ENST00000300933 SPATA13Q96N96 652 aa22.52■■□□□ 1.2
TPM4-201ENST00000300933 PPP1R12CQ9BZL4 782 aa22.52■■□□□ 1.2
TPM4-201ENST00000300933 TKTL2Q9H0I9 626 aa22.52■■□□□ 1.2
TPM4-201ENST00000300933 SIK2Q9H0K1 926 aa22.52■■□□□ 1.2
TPM4-201ENST00000300933 BPTFQ12830 3046 aa22.52■■□□□ 1.2
TPM4-201ENST00000300933 SRGAP2BP0DMP2 458 aa22.52■■□□□ 1.2
TPM4-201ENST00000300933 WASHC5Q12768 1159 aa22.52■■□□□ 1.2
TPM4-201ENST00000300933 SDHAF4Q5VUM1 108 aa22.52■■□□□ 1.2
TPM4-201ENST00000300933 BNIPLQ7Z465 357 aa22.52■■□□□ 1.2
TPM4-201ENST00000300933 ZNF280BQ86YH2 543 aa22.52■■□□□ 1.2
TPM4-201ENST00000300933 ENDOVQ8N8Q3 282 aaKnown RBP22.52■■□□□ 1.2
TPM4-201ENST00000300933 SMARCD1Q96GM5 515 aa22.52■■□□□ 1.2
TPM4-201ENST00000300933 NMRK1Q9NWW6 199 aa22.52■■□□□ 1.2
TPM4-201ENST00000300933 APOEP02649 317 aa22.51■■□□□ 1.19
TPM4-201ENST00000300933 SP100P23497 879 aaPredicted RBP22.51■■□□□ 1.19
TPM4-201ENST00000300933 MGAT1P26572 445 aa22.51■■□□□ 1.19
TPM4-201ENST00000300933 TPI1P60174 286 aa22.51■■□□□ 1.19
TPM4-201ENST00000300933 DPYSQ14117 519 aa22.51■■□□□ 1.19
TPM4-201ENST00000300933 MTDHQ86UE4 582 aaKnown RBP22.51■■□□□ 1.19
TPM4-201ENST00000300933 EBNA1BP2Q99848 306 aaKnown RBP22.51■■□□□ 1.19
TPM4-201ENST00000300933 COLEC11Q9BWP8 271 aa22.51■■□□□ 1.19
TPM4-201ENST00000300933 ZCWPW1Q9H0M4 648 aa22.51■■□□□ 1.19
TPM4-201ENST00000300933 NPHS2Q9NP85 383 aa22.51■■□□□ 1.19
TPM4-201ENST00000300933 IQANK1A0A1B0GTG1 560 aa22.51■■□□□ 1.19
TPM4-201ENST00000300933 CWF19L1Q69YN2 538 aaKnown RBP22.51■■□□□ 1.19
TPM4-201ENST00000300933 MRPL10Q7Z7H8 261 aaKnown RBP22.51■■□□□ 1.19
TPM4-201ENST00000300933 SLC26A11Q86WA9 606 aa22.51■■□□□ 1.19
TPM4-201ENST00000300933 WDCPQ9H6R7 721 aa22.51■■□□□ 1.19
TPM4-201ENST00000300933 CNGB3Q9NQW8 809 aa22.51■■□□□ 1.19
TPM4-201ENST00000300933 ZFP69BQ9UJL9 534 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms