RNA–Protein interactions for RNA: ENST00000297354.6

SBSPON-201, Transcript of somatomedin B and thrombospondin type 1 domain containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SBSPON, Length 3,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBSPON-201ENST00000297354 PTPN20Q4JDL3 420 aa17.1■□□□□ 0.33
SBSPON-201ENST00000297354 MAGEE2Q8TD90 523 aaPredicted RBP17.1■□□□□ 0.33
SBSPON-201ENST00000297354 DNAJB4Q9UDY4 337 aa17.1■□□□□ 0.33
SBSPON-201ENST00000297354 NARFQ9UHQ1 456 aa17.1■□□□□ 0.33
SBSPON-201ENST00000297354 RAB26Q9ULW5 256 aa17.1■□□□□ 0.33
SBSPON-201ENST00000297354 WDR37Q9Y2I8 494 aa17.1■□□□□ 0.33
SBSPON-201ENST00000297354 SF3B1O75533 1304 aaKnown RBP eCLIP17.1■□□□□ 0.33
SBSPON-201ENST00000297354 IGLV3-22A0A075B6J6 115 aa17.09■□□□□ 0.33
SBSPON-201ENST00000297354 APOC4-APOC2K7ER74 178 aa17.09■□□□□ 0.33
SBSPON-201ENST00000297354 ZBTB14O43829 449 aa17.09■□□□□ 0.33
SBSPON-201ENST00000297354 APOC2P02655 101 aa17.09■□□□□ 0.33
SBSPON-201ENST00000297354 NDST2P52849 883 aa17.09■□□□□ 0.33
SBSPON-201ENST00000297354 CYP2A13Q16696 494 aa17.09■□□□□ 0.33
SBSPON-201ENST00000297354 ZNF568Q3ZCX4 644 aa17.09■□□□□ 0.33
SBSPON-201ENST00000297354 DCAF6Q58WW2 860 aa17.09■□□□□ 0.33
SBSPON-201ENST00000297354 TEDDM1Q5T9Z0 273 aa17.09■□□□□ 0.33
SBSPON-201ENST00000297354 HERC6Q8IVU3 1022 aa17.09■□□□□ 0.33
SBSPON-201ENST00000297354 ELMO1Q92556 727 aa17.09■□□□□ 0.33
SBSPON-201ENST00000297354 ZNF516Q92618 1163 aa17.09■□□□□ 0.33
SBSPON-201ENST00000297354 NRBF2Q96F24 287 aa17.09■□□□□ 0.33
SBSPON-201ENST00000297354 NLRP4Q96MN2 994 aa17.09■□□□□ 0.33
SBSPON-201ENST00000297354 FAM96AQ9H5X1 160 aa17.09■□□□□ 0.33
SBSPON-201ENST00000297354 CLK4Q9HAZ1 481 aaKnown RBP17.09■□□□□ 0.33
SBSPON-201ENST00000297354 POLIQ9UNA4 740 aa17.09■□□□□ 0.33
SBSPON-201ENST00000297354 A0A087WXM4 84 aa17.09■□□□□ 0.33
SBSPON-201ENST00000297354 A0A096LPK6 155 aa17.09■□□□□ 0.33
SBSPON-201ENST00000297354 MATN2O00339 956 aa17.09■□□□□ 0.33
SBSPON-201ENST00000297354 COL6A2P12110 1019 aa17.09■□□□□ 0.33
SBSPON-201ENST00000297354 ZNF23P17027 643 aa17.09■□□□□ 0.33
SBSPON-201ENST00000297354 MMP8P22894 467 aa17.09■□□□□ 0.33
SBSPON-201ENST00000297354 RAD23AP54725 363 aa17.09■□□□□ 0.33
SBSPON-201ENST00000297354 STX1BP61266 288 aa17.09■□□□□ 0.33
SBSPON-201ENST00000297354 DLGAP5Q15398 846 aa17.09■□□□□ 0.33
SBSPON-201ENST00000297354 BBS12Q6ZW61 710 aa17.09■□□□□ 0.33
SBSPON-201ENST00000297354 PLEKHA8Q96JA3 519 aa17.09■□□□□ 0.33
SBSPON-201ENST00000297354 KCNU1A8MYU2 1149 aa17.09■□□□□ 0.33
SBSPON-201ENST00000297354 RNASEH2AO75792 299 aaKnown RBP17.09■□□□□ 0.33
SBSPON-201ENST00000297354 CST3P01034 146 aaPredicted RBP17.09■□□□□ 0.33
SBSPON-201ENST00000297354 AOC1P19801 751 aa17.09■□□□□ 0.33
SBSPON-201ENST00000297354 ALDH4A1P30038 563 aa17.09■□□□□ 0.33
SBSPON-201ENST00000297354 OXCT1P55809 520 aa17.09■□□□□ 0.33
SBSPON-201ENST00000297354 XIAPP98170 497 aa17.09■□□□□ 0.33
SBSPON-201ENST00000297354 MS4A2Q01362 244 aa17.09■□□□□ 0.33
SBSPON-201ENST00000297354 SLC15A2Q16348 729 aa17.09■□□□□ 0.33
SBSPON-201ENST00000297354 CCDC81Q6ZN84 652 aa17.09■□□□□ 0.33
SBSPON-201ENST00000297354 ZNF354CQ86Y25 554 aa17.09■□□□□ 0.33
SBSPON-201ENST00000297354 AHI1Q8N157 1196 aa17.09■□□□□ 0.33
SBSPON-201ENST00000297354 SLC35B2Q8TB61 432 aa17.09■□□□□ 0.33
SBSPON-201ENST00000297354 HEPHQ9BQS7 1158 aa17.09■□□□□ 0.33
SBSPON-201ENST00000297354 SSU72Q9NP77 194 aaKnown RBP17.09■□□□□ 0.33
SBSPON-201ENST00000297354 PKD2L2Q9NZM6 624 aa17.09■□□□□ 0.33
SBSPON-201ENST00000297354 STK39Q9UEW8 545 aa17.09■□□□□ 0.33
SBSPON-201ENST00000297354 CCNT2O60583 730 aaKnown RBP17.08■□□□□ 0.33
SBSPON-201ENST00000297354 GRK2P25098 689 aa17.08■□□□□ 0.33
SBSPON-201ENST00000297354 MRPS15P82914 257 aaKnown RBP17.08■□□□□ 0.33
SBSPON-201ENST00000297354 MTA1Q13330 715 aa17.08■□□□□ 0.33
SBSPON-201ENST00000297354 ZNF667Q5HYK9 610 aa17.08■□□□□ 0.33
SBSPON-201ENST00000297354 ATP6V0A1Q93050 837 aa17.08■□□□□ 0.33
SBSPON-201ENST00000297354 TAAR1Q96RJ0 339 aa17.08■□□□□ 0.33
SBSPON-201ENST00000297354 CORO1BQ9BR76 489 aa17.08■□□□□ 0.33
SBSPON-201ENST00000297354 ATRNL1Q5VV63 1379 aa17.08■□□□□ 0.32
SBSPON-201ENST00000297354 RGSL1A5PLK6 1076 aa17.08■□□□□ 0.32
SBSPON-201ENST00000297354 RFPL1O75677 317 aa17.08■□□□□ 0.32
SBSPON-201ENST00000297354 SDC4P31431 198 aa17.08■□□□□ 0.32
SBSPON-201ENST00000297354 NKX2-5P52952 324 aaPredicted RBP17.08■□□□□ 0.32
SBSPON-201ENST00000297354 CBR4Q8N4T8 237 aa17.08■□□□□ 0.32
SBSPON-201ENST00000297354 BORCS5Q969J3 196 aa17.08■□□□□ 0.32
SBSPON-201ENST00000297354 TAMM41Q96BW9 452 aa17.08■□□□□ 0.32
SBSPON-201ENST00000297354 ZFYVE28Q9HCC9 887 aa17.08■□□□□ 0.32
SBSPON-201ENST00000297354 NYAP2Q9P242 653 aa17.08■□□□□ 0.32
SBSPON-201ENST00000297354 KCNK1O00180 336 aa17.08■□□□□ 0.32
SBSPON-201ENST00000297354 GNGT2O14610 69 aa17.08■□□□□ 0.32
SBSPON-201ENST00000297354 ADORA2AP29274 412 aa17.08■□□□□ 0.32
SBSPON-201ENST00000297354 GTF2BQ00403 316 aa17.08■□□□□ 0.32
SBSPON-201ENST00000297354 SLC18A2Q05940 514 aa17.08■□□□□ 0.32
SBSPON-201ENST00000297354 NFIL3Q16649 462 aa17.08■□□□□ 0.32
SBSPON-201ENST00000297354 FGD3Q5JSP0 725 aa17.08■□□□□ 0.32
SBSPON-201ENST00000297354 CLEC4FQ8N1N0 589 aa17.08■□□□□ 0.32
SBSPON-201ENST00000297354 ADCY4Q8NFM4 1077 aa17.08■□□□□ 0.32
SBSPON-201ENST00000297354 DCDC2Q9UHG0 476 aa17.08■□□□□ 0.32
SBSPON-201ENST00000297354 GPC6Q9Y625 555 aaPredicted RBP17.08■□□□□ 0.32
SBSPON-201ENST00000297354 LAMB4A4D0S4 1761 aa17.08■□□□□ 0.32
SBSPON-201ENST00000297354 HTR3EA5X5Y0 456 aa17.07■□□□□ 0.32
SBSPON-201ENST00000297354 EXTL3O43909 919 aa17.07■□□□□ 0.32
SBSPON-201ENST00000297354 HNRNPLP14866 589 aaKnown RBP eCLIP17.07■□□□□ 0.32
SBSPON-201ENST00000297354 CD1EP15812 388 aa17.07■□□□□ 0.32
SBSPON-201ENST00000297354 PORP16435 677 aaPredicted RBP17.07■□□□□ 0.32
SBSPON-201ENST00000297354 VARSP26640 1264 aaKnown RBP17.07■□□□□ 0.32
SBSPON-201ENST00000297354 CD300CQ08708 224 aa17.07■□□□□ 0.32
SBSPON-201ENST00000297354 HTRA1Q92743 480 aa17.07■□□□□ 0.32
SBSPON-201ENST00000297354 FAIMQ9NVQ4 179 aa17.07■□□□□ 0.32
SBSPON-201ENST00000297354 SH3PXD2BA1X283 911 aa17.07■□□□□ 0.32
SBSPON-201ENST00000297354 DLGAP3O95886 979 aa17.07■□□□□ 0.32
SBSPON-201ENST00000297354 IL10P22301 178 aa17.07■□□□□ 0.32
SBSPON-201ENST00000297354 IREB2P48200 963 aaKnown RBP17.07■□□□□ 0.32
SBSPON-201ENST00000297354 SNAPC2Q13487 334 aa17.07■□□□□ 0.32
SBSPON-201ENST00000297354 OLIG2Q13516 323 aa17.07■□□□□ 0.32
SBSPON-201ENST00000297354 ZFP1Q6P2D0 407 aa17.07■□□□□ 0.32
SBSPON-201ENST00000297354 ADGRF2Q8IZF7 708 aa17.07■□□□□ 0.32
SBSPON-201ENST00000297354 SLC4A11Q8NBS3 891 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms