RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 SEMA6BQ9H3T3 888 aa12.12□□□□□ -0.47
SYNGAP1-201ENST00000293748 RNPEPL1Q9HAU8 725 aa12.12□□□□□ -0.47
SYNGAP1-201ENST00000293748 DIABLOQ9NR28 239 aa12.12□□□□□ -0.47
SYNGAP1-201ENST00000293748 CHORDC1Q9UHD1 332 aaPredicted RBP12.12□□□□□ -0.47
SYNGAP1-201ENST00000293748 BCL10O95999 233 aa12.12□□□□□ -0.47
SYNGAP1-201ENST00000293748 ITGA4P13612 1032 aa12.12□□□□□ -0.47
SYNGAP1-201ENST00000293748 TBL3Q12788 808 aaKnown RBP12.12□□□□□ -0.47
SYNGAP1-201ENST00000293748 CUL2Q13617 745 aa12.12□□□□□ -0.47
SYNGAP1-201ENST00000293748 FBXO47Q5MNV8 452 aa12.12□□□□□ -0.47
SYNGAP1-201ENST00000293748 NT5DC1Q5TFE4 455 aa12.12□□□□□ -0.47
SYNGAP1-201ENST00000293748 TADA1Q96BN2 335 aa12.12□□□□□ -0.47
SYNGAP1-201ENST00000293748 RMND5BQ96G75 393 aaPredicted RBP12.12□□□□□ -0.47
SYNGAP1-201ENST00000293748 ADAM2Q99965 735 aa12.12□□□□□ -0.47
SYNGAP1-201ENST00000293748 H2AFY2Q9P0M6 372 aaPredicted RBP12.12□□□□□ -0.47
SYNGAP1-201ENST00000293748 TSR3Q9UJK0 312 aaKnown RBP12.12□□□□□ -0.47
SYNGAP1-201ENST00000293748 ST3GAL5Q9UNP4 418 aa12.12□□□□□ -0.47
SYNGAP1-201ENST00000293748 E2F8A0AVK6 867 aa12.11□□□□□ -0.47
SYNGAP1-201ENST00000293748 PTPN7P35236 360 aa12.11□□□□□ -0.47
SYNGAP1-201ENST00000293748 GTF2H3Q13889 308 aa12.11□□□□□ -0.47
SYNGAP1-201ENST00000293748 MYBPC2Q14324 1141 aa12.11□□□□□ -0.47
SYNGAP1-201ENST00000293748 PDK2Q15119 407 aa12.11□□□□□ -0.47
SYNGAP1-201ENST00000293748 FOXR1Q6PIV2 292 aa12.11□□□□□ -0.47
SYNGAP1-201ENST00000293748 PHOSPHO2Q8TCD6 241 aa12.11□□□□□ -0.47
SYNGAP1-201ENST00000293748 GLMNQ92990 594 aa12.11□□□□□ -0.47
SYNGAP1-201ENST00000293748 MIEF2Q96C03 454 aa12.11□□□□□ -0.47
SYNGAP1-201ENST00000293748 MPP4Q96JB8 637 aa12.11□□□□□ -0.47
SYNGAP1-201ENST00000293748 SH3GL1Q99961 368 aa12.11□□□□□ -0.47
SYNGAP1-201ENST00000293748 DDX50Q9BQ39 737 aaKnown RBP12.11□□□□□ -0.47
SYNGAP1-201ENST00000293748 THUMPD3Q9BV44 507 aaKnown RBP12.11□□□□□ -0.47
SYNGAP1-201ENST00000293748 MRPS26Q9BYN8 205 aaKnown RBP12.11□□□□□ -0.47
SYNGAP1-201ENST00000293748 ZNF518BQ9C0D4 1074 aa12.11□□□□□ -0.47
SYNGAP1-201ENST00000293748 LRRC40Q9H9A6 602 aa12.11□□□□□ -0.47
SYNGAP1-201ENST00000293748 PCDH9Q9HC56 1237 aa12.11□□□□□ -0.47
SYNGAP1-201ENST00000293748 CNGB3Q9NQW8 809 aa12.11□□□□□ -0.47
SYNGAP1-201ENST00000293748 METTL5Q9NRN9 209 aaKnown RBP12.11□□□□□ -0.47
SYNGAP1-201ENST00000293748 PADI3Q9ULW8 664 aa12.11□□□□□ -0.47
SYNGAP1-201ENST00000293748 FARP1Q9Y4F1 1045 aaPredicted RBP12.11□□□□□ -0.47
SYNGAP1-201ENST00000293748 RNF103O00237 685 aa12.11□□□□□ -0.47
SYNGAP1-201ENST00000293748 RGS5O15539 181 aa12.11□□□□□ -0.47
SYNGAP1-201ENST00000293748 PYGMP11217 842 aa12.11□□□□□ -0.47
SYNGAP1-201ENST00000293748 CPA3P15088 417 aa12.11□□□□□ -0.47
SYNGAP1-201ENST00000293748 CYP11B1P15538 503 aa12.11□□□□□ -0.47
SYNGAP1-201ENST00000293748 BGNP21810 368 aa12.11□□□□□ -0.47
SYNGAP1-201ENST00000293748 MMRN1Q13201 1228 aa12.11□□□□□ -0.47
SYNGAP1-201ENST00000293748 BTG3Q14201 252 aaPredicted RBP12.11□□□□□ -0.47
SYNGAP1-201ENST00000293748 SPDYE7PQ495Y7 208 aa12.11□□□□□ -0.47
SYNGAP1-201ENST00000293748 ARMCX4Q5H9R4 360 aa12.11□□□□□ -0.47
SYNGAP1-201ENST00000293748 SWT1Q5T5J6 900 aaKnown RBP12.11□□□□□ -0.47
SYNGAP1-201ENST00000293748 ANKS3Q6ZW76 656 aa12.11□□□□□ -0.47
SYNGAP1-201ENST00000293748 HDDC2Q7Z4H3 204 aa12.11□□□□□ -0.47
SYNGAP1-201ENST00000293748 SH3RF1Q7Z6J0 888 aa12.11□□□□□ -0.47
SYNGAP1-201ENST00000293748 CD302Q8IX05 232 aa12.11□□□□□ -0.47
SYNGAP1-201ENST00000293748 DEFB107AQ8IZN7 70 aa12.11□□□□□ -0.47
SYNGAP1-201ENST00000293748 FAM9CQ8IZT9 166 aa12.11□□□□□ -0.47
SYNGAP1-201ENST00000293748 C4orf32Q8N8J7 132 aa12.11□□□□□ -0.47
SYNGAP1-201ENST00000293748 IPMKQ8NFU5 416 aa12.11□□□□□ -0.47
SYNGAP1-201ENST00000293748 CATSPERBQ9H7T0 1116 aa12.11□□□□□ -0.47
SYNGAP1-201ENST00000293748 V9GYQ6 96 aa12.11□□□□□ -0.47
SYNGAP1-201ENST00000293748 GRAP2O75791 330 aa12.11□□□□□ -0.47
SYNGAP1-201ENST00000293748 SUPT7LO94864 414 aa12.11□□□□□ -0.47
SYNGAP1-201ENST00000293748 SARSP49591 514 aaKnown RBP12.11□□□□□ -0.47
SYNGAP1-201ENST00000293748 PDPK2PQ6A1A2 396 aa12.11□□□□□ -0.47
SYNGAP1-201ENST00000293748 PABPC5Q96DU9 382 aaKnown RBP12.11□□□□□ -0.47
SYNGAP1-201ENST00000293748 SGF29Q96ES7 293 aa12.11□□□□□ -0.47
SYNGAP1-201ENST00000293748 PARVBQ9HBI1 364 aa12.11□□□□□ -0.47
SYNGAP1-201ENST00000293748 OSGEPQ9NPF4 335 aa12.11□□□□□ -0.47
SYNGAP1-201ENST00000293748 ZNF446Q9NWS9 450 aa12.11□□□□□ -0.47
SYNGAP1-201ENST00000293748 KANSL3Q9P2N6 904 aa12.11□□□□□ -0.47
SYNGAP1-201ENST00000293748 CTNNAL1Q9UBT7 734 aa12.11□□□□□ -0.47
SYNGAP1-201ENST00000293748 SOX11P35716 441 aa12.11□□□□□ -0.47
SYNGAP1-201ENST00000293748 POU4F1Q01851 419 aa12.11□□□□□ -0.47
SYNGAP1-201ENST00000293748 DCTN2Q13561 401 aaKnown RBP12.11□□□□□ -0.47
SYNGAP1-201ENST00000293748 PKN3Q6P5Z2 889 aa12.11□□□□□ -0.47
SYNGAP1-201ENST00000293748 ZCCHC7Q8N3Z6 543 aaKnown RBP12.11□□□□□ -0.47
SYNGAP1-201ENST00000293748 FIBCD1Q8N539 461 aa12.11□□□□□ -0.47
SYNGAP1-201ENST00000293748 TATDN2Q93075 761 aa12.11□□□□□ -0.47
SYNGAP1-201ENST00000293748 MTERF3Q96E29 417 aa12.11□□□□□ -0.47
SYNGAP1-201ENST00000293748 ZFYVE19Q96K21 471 aa12.11□□□□□ -0.47
SYNGAP1-201ENST00000293748 TMEM79Q9BSE2 394 aa12.11□□□□□ -0.47
SYNGAP1-201ENST00000293748 NCKIPSDQ9NZQ3 722 aa12.11□□□□□ -0.47
SYNGAP1-201ENST00000293748 TRIM43BA6NCK2 446 aa12.1□□□□□ -0.47
SYNGAP1-201ENST00000293748 OCM2P0CE71 109 aa12.1□□□□□ -0.47
SYNGAP1-201ENST00000293748 OCMP0CE72 109 aaPredicted RBP12.1□□□□□ -0.47
SYNGAP1-201ENST00000293748 SPATA31C1P0DKV0 1188 aa12.1□□□□□ -0.47
SYNGAP1-201ENST00000293748 SPIRE1Q08AE8 756 aa12.1□□□□□ -0.47
SYNGAP1-201ENST00000293748 TMEM119Q4V9L6 283 aa12.1□□□□□ -0.47
SYNGAP1-201ENST00000293748 HYIQ5T013 277 aa12.1□□□□□ -0.47
SYNGAP1-201ENST00000293748 ZNF697Q5TEC3 545 aa12.1□□□□□ -0.47
SYNGAP1-201ENST00000293748 SLC24A5Q71RS6 500 aa12.1□□□□□ -0.47
SYNGAP1-201ENST00000293748 HDAC7Q8WUI4 952 aa12.1□□□□□ -0.47
SYNGAP1-201ENST00000293748 TRIM43Q96BQ3 446 aaPredicted RBP12.1□□□□□ -0.47
SYNGAP1-201ENST00000293748 GAS2L1Q99501 681 aaPredicted RBP12.1□□□□□ -0.47
SYNGAP1-201ENST00000293748 PI4K2AQ9BTU6 479 aa12.1□□□□□ -0.47
SYNGAP1-201ENST00000293748 PAIP1Q9H074 479 aaKnown RBP12.1□□□□□ -0.47
SYNGAP1-201ENST00000293748 NRDE2Q9H7Z3 1164 aa12.1□□□□□ -0.47
SYNGAP1-201ENST00000293748 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.1□□□□□ -0.47
SYNGAP1-201ENST00000293748 C16orf72Q14CZ0 275 aa12.1□□□□□ -0.47
SYNGAP1-201ENST00000293748 CREG2Q8IUH2 290 aa12.1□□□□□ -0.47
SYNGAP1-201ENST00000293748 UNC45BQ8IWX7 931 aa12.1□□□□□ -0.47
SYNGAP1-201ENST00000293748 TRIM63Q969Q1 353 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms