RNA–Protein interactions for RNA: ENST00000292779.3

CCDC116-201, Transcript of coiled-coil domain containing 116, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC116, Length 2,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116-201ENST00000292779 DEUP1Q05D60 604 aa15.48■□□□□ 0.07
CCDC116-201ENST00000292779 STX3Q13277 289 aa15.48■□□□□ 0.07
CCDC116-201ENST00000292779 DPYSQ14117 519 aa15.48■□□□□ 0.07
CCDC116-201ENST00000292779 KHDC1Q4VXA5 237 aaKnown RBP15.48■□□□□ 0.07
CCDC116-201ENST00000292779 MDH1BQ5I0G3 518 aa15.48■□□□□ 0.07
CCDC116-201ENST00000292779 KIAA0319Q5VV43 1072 aa15.48■□□□□ 0.07
CCDC116-201ENST00000292779 KYAT3Q6YP21 454 aaKnown RBP15.48■□□□□ 0.07
CCDC116-201ENST00000292779 RFX8Q6ZV50 586 aa15.48■□□□□ 0.07
CCDC116-201ENST00000292779 KIRREL3Q8IZU9 778 aa15.48■□□□□ 0.07
CCDC116-201ENST00000292779 SIX6OS1Q8N1H7 587 aa15.48■□□□□ 0.07
CCDC116-201ENST00000292779 RNF169Q8NCN4 708 aa15.48■□□□□ 0.07
CCDC116-201ENST00000292779 SH3TC2Q8TF17 1288 aa15.48■□□□□ 0.07
CCDC116-201ENST00000292779 CDKL2Q92772 493 aa15.48■□□□□ 0.07
CCDC116-201ENST00000292779 WNT8BQ93098 351 aa15.48■□□□□ 0.07
CCDC116-201ENST00000292779 PGBD4Q96DM1 585 aa15.48■□□□□ 0.07
CCDC116-201ENST00000292779 SLC2A13Q96QE2 648 aa15.48■□□□□ 0.07
CCDC116-201ENST00000292779 TSPAN18Q96SJ8 248 aa15.48■□□□□ 0.07
CCDC116-201ENST00000292779 FERMT1Q9BQL6 677 aa15.48■□□□□ 0.07
CCDC116-201ENST00000292779 IL1RAPL1Q9NZN1 696 aa15.48■□□□□ 0.07
CCDC116-201ENST00000292779 PPARGC1AQ9UBK2 798 aaKnown RBP15.48■□□□□ 0.07
CCDC116-201ENST00000292779 EMCNQ9ULC0 261 aa15.48■□□□□ 0.07
CCDC116-201ENST00000292779 HBS1LQ9Y450 684 aaKnown RBP15.48■□□□□ 0.07
CCDC116-201ENST00000292779 E7ENQ6 273 aa15.47■□□□□ 0.07
CCDC116-201ENST00000292779 EEF2KO00418 725 aaKnown RBP15.47■□□□□ 0.07
CCDC116-201ENST00000292779 PPP1R12AO14974 1030 aaPredicted RBP15.47■□□□□ 0.07
CCDC116-201ENST00000292779 ALDH1A1P00352 501 aa15.47■□□□□ 0.07
CCDC116-201ENST00000292779 RARBP10826 455 aa15.47■□□□□ 0.07
CCDC116-201ENST00000292779 CPT1AP50416 773 aa15.47■□□□□ 0.07
CCDC116-201ENST00000292779 TKTL1P51854 596 aa15.47■□□□□ 0.07
CCDC116-201ENST00000292779 FCGRTP55899 365 aa15.47■□□□□ 0.07
CCDC116-201ENST00000292779 MAP3K7CLP57077 242 aa15.47■□□□□ 0.07
CCDC116-201ENST00000292779 PDE1CQ14123 709 aaPredicted RBP15.47■□□□□ 0.07
CCDC116-201ENST00000292779 PAFAH1B3Q15102 231 aaKnown RBP15.47■□□□□ 0.07
CCDC116-201ENST00000292779 FASTKD1Q53R41 847 aaKnown RBP15.47■□□□□ 0.07
CCDC116-201ENST00000292779 TREML1Q86YW5 311 aa15.47■□□□□ 0.07
CCDC116-201ENST00000292779 KCTD13Q8WZ19 329 aa15.47■□□□□ 0.07
CCDC116-201ENST00000292779 MCUR1Q96AQ8 359 aa15.47■□□□□ 0.07
CCDC116-201ENST00000292779 WWP1Q9H0M0 922 aa15.47■□□□□ 0.07
CCDC116-201ENST00000292779 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.47■□□□□ 0.07
CCDC116-201ENST00000292779 SF3B1O75533 1304 aaKnown RBP eCLIP15.47■□□□□ 0.07
CCDC116-201ENST00000292779 C17orf102A2RUQ5 167 aa15.47■□□□□ 0.07
CCDC116-201ENST00000292779 MYADML2A6NDP7 307 aa15.47■□□□□ 0.07
CCDC116-201ENST00000292779 MEIS3P2A8K0S8 358 aa15.47■□□□□ 0.07
CCDC116-201ENST00000292779 CAPN14A8MX76 684 aa15.47■□□□□ 0.07
CCDC116-201ENST00000292779 FAM72CH0Y354 149 aa15.47■□□□□ 0.07
CCDC116-201ENST00000292779 NRP1O14786 923 aa15.47■□□□□ 0.07
CCDC116-201ENST00000292779 CPA2P48052 419 aa15.47■□□□□ 0.07
CCDC116-201ENST00000292779 SP3Q02447 781 aa15.47■□□□□ 0.07
CCDC116-201ENST00000292779 OLIG2Q13516 323 aa15.47■□□□□ 0.07
CCDC116-201ENST00000292779 NAA25Q14CX7 972 aa15.47■□□□□ 0.07
CCDC116-201ENST00000292779 TAF11Q15544 211 aa15.47■□□□□ 0.07
CCDC116-201ENST00000292779 N4BP2L1Q5TBK1 243 aaPredicted RBP15.47■□□□□ 0.07
CCDC116-201ENST00000292779 FAM72AQ5TYM5 149 aa15.47■□□□□ 0.07
CCDC116-201ENST00000292779 FAM72DQ6L9T8 149 aa15.47■□□□□ 0.07
CCDC116-201ENST00000292779 CES3Q6UWW8 571 aa15.47■□□□□ 0.07
CCDC116-201ENST00000292779 FAM72BQ86X60 149 aa15.47■□□□□ 0.07
CCDC116-201ENST00000292779 CCNJLQ8IV13 435 aa15.47■□□□□ 0.07
CCDC116-201ENST00000292779 MAB21L3Q8N8X9 362 aa15.47■□□□□ 0.07
CCDC116-201ENST00000292779 ADAM32Q8TC27 787 aa15.47■□□□□ 0.07
CCDC116-201ENST00000292779 ACMSDQ8TDX5 336 aa15.47■□□□□ 0.07
CCDC116-201ENST00000292779 SOCS4Q8WXH5 440 aa15.47■□□□□ 0.07
CCDC116-201ENST00000292779 DCLRE1BQ9H816 532 aa15.47■□□□□ 0.07
CCDC116-201ENST00000292779 NUP205Q92621 2012 aa15.46■□□□□ 0.07
CCDC116-201ENST00000292779 KCNK1O00180 336 aa15.46■□□□□ 0.07
CCDC116-201ENST00000292779 DCLK1O15075 740 aa15.46■□□□□ 0.07
CCDC116-201ENST00000292779 FYNP06241 537 aa15.46■□□□□ 0.07
CCDC116-201ENST00000292779 ENO1P06733 434 aaKnown RBP15.46■□□□□ 0.07
CCDC116-201ENST00000292779 LRPAP1P30533 357 aa15.46■□□□□ 0.07
CCDC116-201ENST00000292779 IFRD2Q12894 506 aaPredicted RBP15.46■□□□□ 0.07
CCDC116-201ENST00000292779 STXBP5Q5T5C0 1151 aa15.46■□□□□ 0.07
CCDC116-201ENST00000292779 PID1Q7Z2X4 250 aa15.46■□□□□ 0.07
CCDC116-201ENST00000292779 TEX9Q8N6V9 391 aa15.46■□□□□ 0.07
CCDC116-201ENST00000292779 PPP1R14CQ8TAE6 165 aa15.46■□□□□ 0.07
CCDC116-201ENST00000292779 SLC7A14Q8TBB6 771 aa15.46■□□□□ 0.07
CCDC116-201ENST00000292779 PGLYRP2Q96PD5 576 aa15.46■□□□□ 0.07
CCDC116-201ENST00000292779 ANLNQ9NQW6 1124 aa15.46■□□□□ 0.07
CCDC116-201ENST00000292779 KRT82Q9NSB4 513 aa15.46■□□□□ 0.07
CCDC116-201ENST00000292779 THAP1Q9NVV9 213 aa15.46■□□□□ 0.07
CCDC116-201ENST00000292779 SHROOM3Q8TF72 1996 aa15.46■□□□□ 0.07
CCDC116-201ENST00000292779 GABRDO14764 452 aa15.46■□□□□ 0.06
CCDC116-201ENST00000292779 GLRA3O75311 464 aa15.46■□□□□ 0.06
CCDC116-201ENST00000292779 CAPN15O75808 1086 aa15.46■□□□□ 0.06
CCDC116-201ENST00000292779 LMNAP02545 664 aaKnown RBP15.46■□□□□ 0.06
CCDC116-201ENST00000292779 AMHP03971 560 aa15.46■□□□□ 0.06
CCDC116-201ENST00000292779 ITGA2BP08514 1039 aa15.46■□□□□ 0.06
CCDC116-201ENST00000292779 ERVK-10P10266 1014 aa15.46■□□□□ 0.06
CCDC116-201ENST00000292779 ADRA1BP35368 520 aa15.46■□□□□ 0.06
CCDC116-201ENST00000292779 MLH1P40692 756 aa15.46■□□□□ 0.06
CCDC116-201ENST00000292779 PTDSS1P48651 473 aaKnown RBP15.46■□□□□ 0.06
CCDC116-201ENST00000292779 RPL10AP62906 217 aaKnown RBP15.46■□□□□ 0.06
CCDC116-201ENST00000292779 CDK18Q07002 472 aa15.46■□□□□ 0.06
CCDC116-201ENST00000292779 KPNB1Q14974 876 aaKnown RBP15.46■□□□□ 0.06
CCDC116-201ENST00000292779 MBLAC2Q68D91 279 aa15.46■□□□□ 0.06
CCDC116-201ENST00000292779 RASSF3Q86WH2 238 aa15.46■□□□□ 0.06
CCDC116-201ENST00000292779 PPP1R10Q96QC0 940 aaKnown RBP15.46■□□□□ 0.06
CCDC116-201ENST00000292779 NAT9Q9BTE0 207 aa15.46■□□□□ 0.06
CCDC116-201ENST00000292779 ULBP1Q9BZM6 244 aa15.46■□□□□ 0.06
CCDC116-201ENST00000292779 CRTAC1Q9NQ79 661 aa15.46■□□□□ 0.06
CCDC116-201ENST00000292779 IGSF9Q9P2J2 1179 aa15.46■□□□□ 0.06
CCDC116-201ENST00000292779 CASP8AP2Q9UKL3 1982 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms