RNA–Protein interactions for RNA: ENST00000288723.8

RAB28-201, Transcript of RAB28, member RAS oncogene family, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RAB28, Length 1,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-201ENST00000288723 PTPRNQ16849 979 aa21.16■□□□□ 0.98
RAB28-201ENST00000288723 FNDC3BQ53EP0 1204 aaKnown RBP21.16■□□□□ 0.98
RAB28-201ENST00000288723 RAB6CQ53S08 254 aa21.16■□□□□ 0.98
RAB28-201ENST00000288723 E4F1Q66K89 784 aaPredicted RBP21.16■□□□□ 0.98
RAB28-201ENST00000288723 SERPINA13PQ6UXR4 307 aa21.16■□□□□ 0.98
RAB28-201ENST00000288723 SND1Q7KZF4 910 aaKnown RBP eCLIP21.16■□□□□ 0.98
RAB28-201ENST00000288723 C14orf80Q86SX3 495 aa21.16■□□□□ 0.98
RAB28-201ENST00000288723 PGAP3Q96FM1 320 aaPredicted RBP21.16■□□□□ 0.98
RAB28-201ENST00000288723 RPRD1AQ96P16 312 aaPredicted RBP21.16■□□□□ 0.98
RAB28-201ENST00000288723 RAB6CQ9H0N0 254 aa21.16■□□□□ 0.98
RAB28-201ENST00000288723 ARRDC1-AS1Q9H2J1 176 aa21.16■□□□□ 0.98
RAB28-201ENST00000288723 PLA2G4CQ9UP65 541 aa21.16■□□□□ 0.98
RAB28-201ENST00000288723 NPC1O15118 1278 aa21.15■□□□□ 0.98
RAB28-201ENST00000288723 EPHX1P07099 455 aa21.15■□□□□ 0.98
RAB28-201ENST00000288723 CCDC172P0C7W6 258 aa21.15■□□□□ 0.98
RAB28-201ENST00000288723 POLR2EP19388 210 aaKnown RBP21.15■□□□□ 0.98
RAB28-201ENST00000288723 STARD3Q14849 445 aa21.15■□□□□ 0.98
RAB28-201ENST00000288723 PHF13Q86YI8 300 aaPredicted RBP21.15■□□□□ 0.98
RAB28-201ENST00000288723 CCDC117Q8IWD4 279 aaPredicted RBP21.15■□□□□ 0.98
RAB28-201ENST00000288723 RXFP2Q8WXD0 754 aa21.15■□□□□ 0.98
RAB28-201ENST00000288723 MRGPRX1Q96LB2 322 aa21.15■□□□□ 0.98
RAB28-201ENST00000288723 TTYH3Q9C0H2 523 aa21.15■□□□□ 0.98
RAB28-201ENST00000288723 CD93Q9NPY3 652 aa21.15■□□□□ 0.98
RAB28-201ENST00000288723 ARHGEF38Q9NXL2 777 aa21.15■□□□□ 0.98
RAB28-201ENST00000288723 MBD1Q9UIS9 605 aaPredicted RBP21.15■□□□□ 0.98
RAB28-201ENST00000288723 MYO6Q9UM54 1294 aa21.15■□□□□ 0.98
RAB28-201ENST00000288723 USP18Q9UMW8 372 aa21.15■□□□□ 0.98
RAB28-201ENST00000288723 ZBTB24O43167 697 aaPredicted RBP21.15■□□□□ 0.98
RAB28-201ENST00000288723 SYNCRIPO60506 623 aaKnown RBP21.15■□□□□ 0.98
RAB28-201ENST00000288723 F9P00740 461 aa21.15■□□□□ 0.98
RAB28-201ENST00000288723 CSKP41240 450 aa21.15■□□□□ 0.98
RAB28-201ENST00000288723 ASIC2Q16515 512 aa21.15■□□□□ 0.98
RAB28-201ENST00000288723 C15orf59Q2T9L4 293 aaPredicted RBP21.15■□□□□ 0.98
RAB28-201ENST00000288723 MAP7D1Q3KQU3 841 aa21.15■□□□□ 0.98
RAB28-201ENST00000288723 SH3PXD2AQ5TCZ1 1133 aa21.15■□□□□ 0.98
RAB28-201ENST00000288723 FAM131BQ86XD5 332 aa21.15■□□□□ 0.98
RAB28-201ENST00000288723 ABCA7Q8IZY2 2146 aa21.15■□□□□ 0.98
RAB28-201ENST00000288723 CCAR2Q8N163 923 aaKnown RBP21.15■□□□□ 0.98
RAB28-201ENST00000288723 SYT11Q9BT88 431 aa21.15■□□□□ 0.98
RAB28-201ENST00000288723 TAS2R14Q9NYV8 317 aa21.15■□□□□ 0.98
RAB28-201ENST00000288723 ATP5BP06576 529 aaKnown RBP21.14■□□□□ 0.97
RAB28-201ENST00000288723 DLDP09622 509 aaKnown RBP21.14■□□□□ 0.97
RAB28-201ENST00000288723 PDGFRAP16234 1089 aa21.14■□□□□ 0.97
RAB28-201ENST00000288723 TNFAIP3P21580 790 aa21.14■□□□□ 0.97
RAB28-201ENST00000288723 ELF2Q15723 593 aa21.14■□□□□ 0.97
RAB28-201ENST00000288723 CDO1Q16878 200 aa21.14■□□□□ 0.97
RAB28-201ENST00000288723 CCDC14Q49A88 953 aa21.14■□□□□ 0.97
RAB28-201ENST00000288723 BRMS1LQ5PSV4 323 aa21.14■□□□□ 0.97
RAB28-201ENST00000288723 RABGAP1LQ5R372 815 aa21.14■□□□□ 0.97
RAB28-201ENST00000288723 SFMBT2Q5VUG0 894 aa21.14■□□□□ 0.97
RAB28-201ENST00000288723 KIAA1324Q6UXG2 1013 aaKnown RBP21.14■□□□□ 0.97
RAB28-201ENST00000288723 MON1BQ7L1V2 547 aa21.14■□□□□ 0.97
RAB28-201ENST00000288723 ARCQ7LC44 396 aa21.14■□□□□ 0.97
RAB28-201ENST00000288723 APCDD1Q8J025 514 aa21.14■□□□□ 0.97
RAB28-201ENST00000288723 ZNF557Q8N988 423 aaPredicted RBP21.14■□□□□ 0.97
RAB28-201ENST00000288723 MKRN2Q9H000 416 aaKnown RBP21.14■□□□□ 0.97
RAB28-201ENST00000288723 HAUS4Q9H6D7 363 aa21.14■□□□□ 0.97
RAB28-201ENST00000288723 IFNKQ9P0W0 207 aa21.14■□□□□ 0.97
RAB28-201ENST00000288723 SPAG17Q6Q759 2223 aa21.13■□□□□ 0.97
RAB28-201ENST00000288723 TMCO5BA8MYB1 307 aa21.13■□□□□ 0.97
RAB28-201ENST00000288723 MAP3K13O43283 966 aa21.13■□□□□ 0.97
RAB28-201ENST00000288723 KRT3P12035 628 aa21.13■□□□□ 0.97
RAB28-201ENST00000288723 CTSOP43234 321 aaPredicted RBP21.13■□□□□ 0.97
RAB28-201ENST00000288723 PITRM1Q5JRX3 1037 aa21.13■□□□□ 0.97
RAB28-201ENST00000288723 BNIPLQ7Z465 357 aa21.13■□□□□ 0.97
RAB28-201ENST00000288723 CACUL1Q86Y37 369 aa21.13■□□□□ 0.97
RAB28-201ENST00000288723 DNAAF5Q86Y56 855 aa21.13■□□□□ 0.97
RAB28-201ENST00000288723 TTC17Q96AE7 1141 aa21.13■□□□□ 0.97
RAB28-201ENST00000288723 SPACA7Q96KW9 195 aa21.13■□□□□ 0.97
RAB28-201ENST00000288723 TMEM245Q9H330 911 aa21.13■□□□□ 0.97
RAB28-201ENST00000288723 MTG2Q9H4K7 406 aa21.13■□□□□ 0.97
RAB28-201ENST00000288723 AIPL1Q9NZN9 384 aa21.13■□□□□ 0.97
RAB28-201ENST00000288723 KIAA1522Q9P206 1035 aaPredicted RBP21.13■□□□□ 0.97
RAB28-201ENST00000288723 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa21.13■□□□□ 0.97
RAB28-201ENST00000288723 C2CD4BA6NLJ0 364 aa21.13■□□□□ 0.97
RAB28-201ENST00000288723 RHOBTB1O94844 696 aa21.13■□□□□ 0.97
RAB28-201ENST00000288723 CALB1P05937 261 aa21.13■□□□□ 0.97
RAB28-201ENST00000288723 SKILP12757 684 aa21.13■□□□□ 0.97
RAB28-201ENST00000288723 RDXP35241 583 aaKnown RBP21.13■□□□□ 0.97
RAB28-201ENST00000288723 RFC1P35251 1148 aaPredicted RBP21.13■□□□□ 0.97
RAB28-201ENST00000288723 PBX1P40424 430 aa21.13■□□□□ 0.97
RAB28-201ENST00000288723 NFKBIBQ15653 356 aa21.13■□□□□ 0.97
RAB28-201ENST00000288723 PMS2CLQ68D20 193 aa21.13■□□□□ 0.97
RAB28-201ENST00000288723 ACAD10Q6JQN1 1059 aa21.13■□□□□ 0.97
RAB28-201ENST00000288723 TMEFF1Q8IYR6 380 aa21.13■□□□□ 0.97
RAB28-201ENST00000288723 DEFB119Q8N690 84 aa21.13■□□□□ 0.97
RAB28-201ENST00000288723 SELENOOQ9BVL4 669 aa21.13■□□□□ 0.97
RAB28-201ENST00000288723 SMOC1Q9H4F8 434 aa21.13■□□□□ 0.97
RAB28-201ENST00000288723 SEMA4GQ9NTN9 838 aa21.13■□□□□ 0.97
RAB28-201ENST00000288723 CYP8B1Q9UNU6 501 aa21.13■□□□□ 0.97
RAB28-201ENST00000288723 CNTN5O94779 1100 aa21.12■□□□□ 0.97
RAB28-201ENST00000288723 EPN2O95208 641 aa21.12■□□□□ 0.97
RAB28-201ENST00000288723 MZF1P28698 734 aaPredicted RBP21.12■□□□□ 0.97
RAB28-201ENST00000288723 CREB5Q02930 508 aa21.12■□□□□ 0.97
RAB28-201ENST00000288723 E2F5Q15329 346 aa21.12■□□□□ 0.97
RAB28-201ENST00000288723 ZNF571Q7Z3V5 609 aaPredicted RBP21.12■□□□□ 0.97
RAB28-201ENST00000288723 OR52K2Q8NGK3 314 aa21.12■□□□□ 0.97
RAB28-201ENST00000288723 CPLX3Q8WVH0 158 aa21.12■□□□□ 0.97
RAB28-201ENST00000288723 LOXL4Q96JB6 756 aa21.12■□□□□ 0.97
RAB28-201ENST00000288723 PRDM16Q9HAZ2 1276 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms