RNA–Protein interactions for RNA: ENST00000288599.9

NCOA1-201, Transcript of nuclear receptor coactivator 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCOA1, Length 6,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-201ENST00000288599 STK17AQ9UEE5 414 aa4.47□□□□□ -1.69
NCOA1-201ENST00000288599 LIMA1Q9UHB6 759 aaKnown RBP4.47□□□□□ -1.69
NCOA1-201ENST00000288599 PHF24Q9UPV7 400 aa4.47□□□□□ -1.69
NCOA1-201ENST00000288599 SLC9A8Q9Y2E8 581 aa4.47□□□□□ -1.69
NCOA1-201ENST00000288599 EFR3BQ9Y2G0 817 aa4.47□□□□□ -1.69
NCOA1-201ENST00000288599 LEMD3Q9Y2U8 911 aa4.47□□□□□ -1.69
NCOA1-201ENST00000288599 MROH7-TTC4A0A0A0MT08 1334 aa4.47□□□□□ -1.69
NCOA1-201ENST00000288599 MROH7Q68CQ1 1323 aa4.47□□□□□ -1.69
NCOA1-201ENST00000288599 E7ENX8 843 aa4.47□□□□□ -1.69
NCOA1-201ENST00000288599 SRGAP2O75044 1071 aa4.47□□□□□ -1.69
NCOA1-201ENST00000288599 ZC3H11AO75152 810 aaKnown RBP eCLIP4.47□□□□□ -1.69
NCOA1-201ENST00000288599 TRIM3O75382 744 aaPredicted RBP4.47□□□□□ -1.69
NCOA1-201ENST00000288599 LRATO95237 230 aa4.47□□□□□ -1.69
NCOA1-201ENST00000288599 CHGBP05060 677 aa4.47□□□□□ -1.69
NCOA1-201ENST00000288599 CDK8P49336 464 aa4.47□□□□□ -1.69
NCOA1-201ENST00000288599 TAP2Q03519 686 aa4.47□□□□□ -1.69
NCOA1-201ENST00000288599 ARL16Q0P5N6 197 aa4.47□□□□□ -1.69
NCOA1-201ENST00000288599 NFE2L1Q14494 772 aa4.47□□□□□ -1.69
NCOA1-201ENST00000288599 CDO1Q16878 200 aa4.47□□□□□ -1.69
NCOA1-201ENST00000288599 ZNF827Q17R98 1081 aa4.47□□□□□ -1.69
NCOA1-201ENST00000288599 PABPC1LQ4VXU2 614 aaKnown RBP4.47□□□□□ -1.69
NCOA1-201ENST00000288599 BEND6Q5SZJ8 279 aaPredicted RBP4.47□□□□□ -1.69
NCOA1-201ENST00000288599 UBXN11Q5T124 520 aa4.47□□□□□ -1.69
NCOA1-201ENST00000288599 SCARA3Q6AZY7 606 aa4.47□□□□□ -1.69
NCOA1-201ENST00000288599 SCIMPQ6UWF3 145 aa4.47□□□□□ -1.69
NCOA1-201ENST00000288599 FBXO33Q7Z6M2 555 aa4.47□□□□□ -1.69
NCOA1-201ENST00000288599 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.47□□□□□ -1.69
NCOA1-201ENST00000288599 PARGQ86W56 976 aa4.47□□□□□ -1.69
NCOA1-201ENST00000288599 PDSS2Q86YH6 399 aa4.47□□□□□ -1.69
NCOA1-201ENST00000288599 IZUMO1Q8IYV9 350 aa4.47□□□□□ -1.69
NCOA1-201ENST00000288599 SLC4A11Q8NBS3 891 aa4.47□□□□□ -1.69
NCOA1-201ENST00000288599 OTUD7AQ8TE49 926 aaPredicted RBP4.47□□□□□ -1.69
NCOA1-201ENST00000288599 PIGOQ8TEQ8 1089 aa4.47□□□□□ -1.69
NCOA1-201ENST00000288599 ATXN7L3BQ96GX2 97 aa4.47□□□□□ -1.69
NCOA1-201ENST00000288599 MSTO1Q9BUK6 570 aa4.47□□□□□ -1.69
NCOA1-201ENST00000288599 APOL5Q9BWW9 433 aa4.47□□□□□ -1.69
NCOA1-201ENST00000288599 ADAM33Q9BZ11 813 aa4.47□□□□□ -1.69
NCOA1-201ENST00000288599 OSBPL3Q9H4L5 887 aa4.47□□□□□ -1.69
NCOA1-201ENST00000288599 THAP9Q9H5L6 903 aa4.47□□□□□ -1.69
NCOA1-201ENST00000288599 VCPKMTQ9H867 229 aa4.47□□□□□ -1.69
NCOA1-201ENST00000288599 PCDH18Q9HCL0 1135 aa4.47□□□□□ -1.69
NCOA1-201ENST00000288599 SPG21Q9NZD8 308 aa4.47□□□□□ -1.69
NCOA1-201ENST00000288599 CD274Q9NZQ7 290 aa4.47□□□□□ -1.69
NCOA1-201ENST00000288599 SH3BP4Q9P0V3 963 aa4.47□□□□□ -1.69
NCOA1-201ENST00000288599 AK9Q5TCS8 1911 aa4.47□□□□□ -1.69
NCOA1-201ENST00000288599 BORCS7-ASMTA0A0B4J1R7 106 aa4.47□□□□□ -1.69
NCOA1-201ENST00000288599 TCP11X1B4DZS4 312 aa4.47□□□□□ -1.69
NCOA1-201ENST00000288599 E2F3O00716 465 aa4.47□□□□□ -1.69
NCOA1-201ENST00000288599 CALB2P22676 271 aa4.47□□□□□ -1.69
NCOA1-201ENST00000288599 PEX3P56589 373 aa4.47□□□□□ -1.69
NCOA1-201ENST00000288599 GEMIN4P57678 1058 aaKnown RBP4.47□□□□□ -1.69
NCOA1-201ENST00000288599 RGS1Q08116 209 aa4.47□□□□□ -1.69
NCOA1-201ENST00000288599 BNIP1Q12981 228 aa4.47□□□□□ -1.69
NCOA1-201ENST00000288599 C2orf76Q3KRA6 126 aa4.47□□□□□ -1.69
NCOA1-201ENST00000288599 ALG10Q5BKT4 473 aa4.47□□□□□ -1.69
NCOA1-201ENST00000288599 FAM46CQ5VWP2 391 aa4.47□□□□□ -1.69
NCOA1-201ENST00000288599 RAP1GAP2Q684P5 730 aa4.47□□□□□ -1.69
NCOA1-201ENST00000288599 ZCCHC12Q6PEW1 402 aa4.47□□□□□ -1.69
NCOA1-201ENST00000288599 SCARA5Q6ZMJ2 495 aa4.47□□□□□ -1.69
NCOA1-201ENST00000288599 CDYL2Q8N8U2 506 aa4.47□□□□□ -1.69
NCOA1-201ENST00000288599 OR13C3Q8NGS6 347 aa4.47□□□□□ -1.69
NCOA1-201ENST00000288599 BORCS7Q96B45 105 aa4.47□□□□□ -1.69
NCOA1-201ENST00000288599 PANX2Q96RD6 677 aa4.47□□□□□ -1.69
NCOA1-201ENST00000288599 ALG13Q9NP73 1137 aaKnown RBP4.47□□□□□ -1.69
NCOA1-201ENST00000288599 NOP53Q9NZM5 478 aaKnown RBP4.47□□□□□ -1.69
NCOA1-201ENST00000288599 GGA2Q9UJY4 613 aa4.47□□□□□ -1.69
NCOA1-201ENST00000288599 MTO1Q9Y2Z2 717 aaKnown RBP4.47□□□□□ -1.69
NCOA1-201ENST00000288599 MYPNQ86TC9 1320 aa4.47□□□□□ -1.69
NCOA1-201ENST00000288599 CCDC163A0A0D9SF12 145 aa4.47□□□□□ -1.69
NCOA1-201ENST00000288599 ISPDA4D126 451 aa4.47□□□□□ -1.69
NCOA1-201ENST00000288599 MOXD2PA6NHM9 499 aa4.47□□□□□ -1.69
NCOA1-201ENST00000288599 EVPLLA8MZ36 301 aa4.47□□□□□ -1.69
NCOA1-201ENST00000288599 GPR182O15218 404 aa4.47□□□□□ -1.69
NCOA1-201ENST00000288599 AP2A1O95782 977 aa4.47□□□□□ -1.69
NCOA1-201ENST00000288599 ANXA6P08133 673 aa4.47□□□□□ -1.69
NCOA1-201ENST00000288599 UBTFL6P0CB48 400 aaPredicted RBP4.47□□□□□ -1.69
NCOA1-201ENST00000288599 POLR2EP19388 210 aaKnown RBP4.47□□□□□ -1.69
NCOA1-201ENST00000288599 S100A5P33763 92 aa4.47□□□□□ -1.69
NCOA1-201ENST00000288599 NLRP12P59046 1061 aa4.47□□□□□ -1.69
NCOA1-201ENST00000288599 HOXA4Q00056 320 aaPredicted RBP4.47□□□□□ -1.69
NCOA1-201ENST00000288599 SP2Q02086 613 aa4.47□□□□□ -1.69
NCOA1-201ENST00000288599 LONRF1Q17RB8 773 aa4.47□□□□□ -1.69
NCOA1-201ENST00000288599 VWA2Q5GFL6 755 aa4.47□□□□□ -1.69
NCOA1-201ENST00000288599 COPS6Q7L5N1 327 aa4.47□□□□□ -1.69
NCOA1-201ENST00000288599 PAQR7Q86WK9 346 aa4.47□□□□□ -1.69
NCOA1-201ENST00000288599 FADS6Q8N9I5 356 aa4.47□□□□□ -1.69
NCOA1-201ENST00000288599 XXYLT1Q8NBI6 393 aa4.47□□□□□ -1.69
NCOA1-201ENST00000288599 CCDC17Q96LX7 622 aa4.47□□□□□ -1.69
NCOA1-201ENST00000288599 QKIQ96PU8 341 aaKnown RBP eCLIP4.47□□□□□ -1.692e-6■■■■□ 20.5
NCOA1-201ENST00000288599 GPER1Q99527 375 aa4.47□□□□□ -1.69
NCOA1-201ENST00000288599 NUDT9Q9BW91 350 aa4.47□□□□□ -1.69
NCOA1-201ENST00000288599 RHOBTB2Q9BYZ6 727 aa4.47□□□□□ -1.69
NCOA1-201ENST00000288599 C12orf65Q9H3J6 166 aaKnown RBP4.47□□□□□ -1.69
NCOA1-201ENST00000288599 ATXN3LQ9H3M9 355 aa4.47□□□□□ -1.69
NCOA1-201ENST00000288599 DCTPP1Q9H773 170 aa4.47□□□□□ -1.69
NCOA1-201ENST00000288599 ZDHHC4Q9NPG8 344 aa4.47□□□□□ -1.69
NCOA1-201ENST00000288599 NECTIN3Q9NQS3 549 aa4.47□□□□□ -1.69
NCOA1-201ENST00000288599 IP6K2Q9UHH9 426 aa4.47□□□□□ -1.69
NCOA1-201ENST00000288599 ZNF214Q9UL59 606 aaPredicted RBP4.47□□□□□ -1.69
NCOA1-201ENST00000288599 MRPS23Q9Y3D9 190 aaKnown RBP4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms