RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 CATSPERBQ9H7T0 1116 aa19.49■□□□□ 0.71
PDLIM3-202ENST00000284770 SAE1Q9UBE0 346 aaPredicted RBP19.49■□□□□ 0.71
PDLIM3-202ENST00000284770 C2orf16Q68DN1 1984 aa19.49■□□□□ 0.71
PDLIM3-202ENST00000284770 DRGXA6NNA5 263 aa19.49■□□□□ 0.71
PDLIM3-202ENST00000284770 F5H5T6 163 aa19.49■□□□□ 0.71
PDLIM3-202ENST00000284770 FGF10O15520 208 aaPredicted RBP19.49■□□□□ 0.71
PDLIM3-202ENST00000284770 SLC6A4P31645 630 aa19.49■□□□□ 0.71
PDLIM3-202ENST00000284770 NPAS3Q8IXF0 933 aa19.49■□□□□ 0.71
PDLIM3-202ENST00000284770 ZSCAN18Q8TBC5 510 aaPredicted RBP19.49■□□□□ 0.71
PDLIM3-202ENST00000284770 ACTL9Q8TC94 416 aa19.49■□□□□ 0.71
PDLIM3-202ENST00000284770 P3H4Q92791 437 aa19.49■□□□□ 0.71
PDLIM3-202ENST00000284770 FGF13Q92913 245 aa19.49■□□□□ 0.71
PDLIM3-202ENST00000284770 MAGOHBQ96A72 148 aaKnown RBP19.49■□□□□ 0.71
PDLIM3-202ENST00000284770 HAUS1Q96CS2 278 aa19.49■□□□□ 0.71
PDLIM3-202ENST00000284770 FRMD8P1Q9BZ68 369 aaPredicted RBP19.49■□□□□ 0.71
PDLIM3-202ENST00000284770 GDE1Q9NZC3 331 aa19.49■□□□□ 0.71
PDLIM3-202ENST00000284770 AMACRQ9UHK6 382 aa19.49■□□□□ 0.71
PDLIM3-202ENST00000284770 SZT2Q5T011 3432 aa19.49■□□□□ 0.71
PDLIM3-202ENST00000284770 E2F8A0AVK6 867 aa19.48■□□□□ 0.71
PDLIM3-202ENST00000284770 PRAMEF12O95522 483 aa19.48■□□□□ 0.71
PDLIM3-202ENST00000284770 TCF3P15923 654 aa19.48■□□□□ 0.71
PDLIM3-202ENST00000284770 H2AFXP16104 143 aaPredicted RBP19.48■□□□□ 0.71
PDLIM3-202ENST00000284770 PECAM1P16284 738 aaPredicted RBP19.48■□□□□ 0.71
PDLIM3-202ENST00000284770 CHRNA3P32297 505 aa19.48■□□□□ 0.71
PDLIM3-202ENST00000284770 NR2C2P49116 596 aa19.48■□□□□ 0.71
PDLIM3-202ENST00000284770 SLC7A5Q01650 507 aa19.48■□□□□ 0.71
PDLIM3-202ENST00000284770 OTUD4Q01804 1114 aaKnown RBP19.48■□□□□ 0.71
PDLIM3-202ENST00000284770 PAFAH1B3Q15102 231 aaKnown RBP19.48■□□□□ 0.71
PDLIM3-202ENST00000284770 C5orf22Q49AR2 442 aa19.48■□□□□ 0.71
PDLIM3-202ENST00000284770 WDR93Q6P2C0 686 aa19.48■□□□□ 0.71
PDLIM3-202ENST00000284770 TTC27Q6P3X3 843 aa19.48■□□□□ 0.71
PDLIM3-202ENST00000284770 C1orf228Q6PIY5 440 aa19.48■□□□□ 0.71
PDLIM3-202ENST00000284770 TMCO3Q6UWJ1 677 aa19.48■□□□□ 0.71
PDLIM3-202ENST00000284770 TTC16Q8NEE8 873 aa19.48■□□□□ 0.71
PDLIM3-202ENST00000284770 ATG4AQ8WYN0 398 aa19.48■□□□□ 0.71
PDLIM3-202ENST00000284770 IGSF8Q969P0 613 aa19.48■□□□□ 0.71
PDLIM3-202ENST00000284770 RIPOR3Q96MK2 946 aa19.48■□□□□ 0.71
PDLIM3-202ENST00000284770 ZYG11BQ9C0D3 744 aa19.48■□□□□ 0.71
PDLIM3-202ENST00000284770 PCYOX1Q9UHG3 505 aa19.48■□□□□ 0.71
PDLIM3-202ENST00000284770 RFWD3Q6PCD5 774 aa19.47■□□□□ 0.71
PDLIM3-202ENST00000284770 NPNTQ6UXI9 565 aa19.47■□□□□ 0.71
PDLIM3-202ENST00000284770 GET4Q7L5D6 327 aaPredicted RBP19.47■□□□□ 0.71
PDLIM3-202ENST00000284770 FAM217AQ8IXS0 508 aa19.47■□□□□ 0.71
PDLIM3-202ENST00000284770 LGI2Q8N0V4 545 aa19.47■□□□□ 0.71
PDLIM3-202ENST00000284770 RPRD1AQ96P16 312 aaPredicted RBP19.47■□□□□ 0.71
PDLIM3-202ENST00000284770 FAM118BQ9BPY3 351 aa19.47■□□□□ 0.71
PDLIM3-202ENST00000284770 MPP6Q9NZW5 540 aa19.47■□□□□ 0.71
PDLIM3-202ENST00000284770 MFHAS1Q9Y4C4 1052 aa19.47■□□□□ 0.71
PDLIM3-202ENST00000284770 HEY1Q9Y5J3 304 aa19.47■□□□□ 0.71
PDLIM3-202ENST00000284770 WASH4PA8MWX3 477 aa19.47■□□□□ 0.71
PDLIM3-202ENST00000284770 SCAMP3O14828 347 aaKnown RBP19.47■□□□□ 0.71
PDLIM3-202ENST00000284770 LIASO43766 372 aa19.47■□□□□ 0.71
PDLIM3-202ENST00000284770 RHOQP17081 205 aa19.47■□□□□ 0.71
PDLIM3-202ENST00000284770 FNTAP49354 379 aa19.47■□□□□ 0.71
PDLIM3-202ENST00000284770 VSNL1P62760 191 aa19.47■□□□□ 0.71
PDLIM3-202ENST00000284770 GBE1Q04446 702 aa19.47■□□□□ 0.71
PDLIM3-202ENST00000284770 NOMO1Q15155 1222 aa19.47■□□□□ 0.71
PDLIM3-202ENST00000284770 DRICH1Q6PGQ1 229 aaPredicted RBP19.47■□□□□ 0.71
PDLIM3-202ENST00000284770 NLRP14Q86W24 1093 aa19.47■□□□□ 0.71
PDLIM3-202ENST00000284770 RUBCNQ92622 972 aa19.47■□□□□ 0.71
PDLIM3-202ENST00000284770 MYEOVQ96EZ4 313 aa19.47■□□□□ 0.71
PDLIM3-202ENST00000284770 KIF9Q9HAQ2 790 aa19.47■□□□□ 0.71
PDLIM3-202ENST00000284770 REV3LO60673 3130 aa19.47■□□□□ 0.71
PDLIM3-202ENST00000284770 BHMG1C9JSJ3 638 aaPredicted RBP19.46■□□□□ 0.71
PDLIM3-202ENST00000284770 TUBBP07437 444 aa19.46■□□□□ 0.71
PDLIM3-202ENST00000284770 COILP38432 576 aaPredicted RBP19.46■□□□□ 0.71
PDLIM3-202ENST00000284770 MTHFRP42898 656 aa19.46■□□□□ 0.71
PDLIM3-202ENST00000284770 IRAK1P51617 712 aa19.46■□□□□ 0.71
PDLIM3-202ENST00000284770 SLC10A2Q12908 348 aaPredicted RBP19.46■□□□□ 0.71
PDLIM3-202ENST00000284770 SNX1Q13596 522 aa19.46■□□□□ 0.71
PDLIM3-202ENST00000284770 ZNF77Q15935 545 aa19.46■□□□□ 0.71
PDLIM3-202ENST00000284770 RABGAP1LQ5R372 815 aa19.46■□□□□ 0.71
PDLIM3-202ENST00000284770 FBXO38Q6PIJ6 1188 aa19.46■□□□□ 0.71
PDLIM3-202ENST00000284770 CCDC137Q6PK04 289 aaKnown RBP19.46■□□□□ 0.71
PDLIM3-202ENST00000284770 BZW1Q7L1Q6 419 aaKnown RBP19.46■□□□□ 0.71
PDLIM3-202ENST00000284770 MAATS1Q7Z4T9 603 aa19.46■□□□□ 0.71
PDLIM3-202ENST00000284770 BBS7Q8IWZ6 715 aa19.46■□□□□ 0.71
PDLIM3-202ENST00000284770 CELF5Q8N6W0 485 aaKnown RBP19.46■□□□□ 0.71
PDLIM3-202ENST00000284770 RTL3Q8N8U3 475 aaKnown RBP19.46■□□□□ 0.71
PDLIM3-202ENST00000284770 SMRP1Q8NCR6 262 aa19.46■□□□□ 0.71
PDLIM3-202ENST00000284770 CCDC26Q8TAB7 109 aa19.46■□□□□ 0.71
PDLIM3-202ENST00000284770 RIN3Q8TB24 985 aa19.46■□□□□ 0.71
PDLIM3-202ENST00000284770 SLC35B2Q8TB61 432 aa19.46■□□□□ 0.71
PDLIM3-202ENST00000284770 ASB16Q96NS5 453 aa19.46■□□□□ 0.71
PDLIM3-202ENST00000284770 CDX2Q99626 313 aaPredicted RBP19.46■□□□□ 0.71
PDLIM3-202ENST00000284770 RETREG1Q9H6L5 497 aa19.46■□□□□ 0.71
PDLIM3-202ENST00000284770 DONSONQ9NYP3 566 aa19.46■□□□□ 0.71
PDLIM3-202ENST00000284770 DTLQ9NZJ0 730 aa19.46■□□□□ 0.71
PDLIM3-202ENST00000284770 DNPEPQ9ULA0 475 aa19.46■□□□□ 0.71
PDLIM3-202ENST00000284770 CDH7Q9ULB5 785 aa19.46■□□□□ 0.71
PDLIM3-202ENST00000284770 TTI1O43156 1089 aa19.45■□□□□ 0.7
PDLIM3-202ENST00000284770 MFSD11O43934 449 aa19.45■□□□□ 0.7
PDLIM3-202ENST00000284770 HEXIM1O94992 359 aaKnown RBP19.45■□□□□ 0.7
PDLIM3-202ENST00000284770 SERPINB6P35237 376 aa19.45■□□□□ 0.7
PDLIM3-202ENST00000284770 CHKAP35790 457 aa19.45■□□□□ 0.7
PDLIM3-202ENST00000284770 PTGIRP43119 386 aa19.45■□□□□ 0.7
PDLIM3-202ENST00000284770 USP4Q13107 963 aa19.45■□□□□ 0.7
PDLIM3-202ENST00000284770 BYSLQ13895 437 aaKnown RBP19.45■□□□□ 0.7
PDLIM3-202ENST00000284770 DHX34Q14147 1143 aaKnown RBP19.45■□□□□ 0.7
PDLIM3-202ENST00000284770 ALFQ53S48 1182 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms