RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 HMGCS2P54868 508 aa8.9□□□□□ -0.98
NIPBL-201ENST00000282516 SPIDRQ14159 915 aa8.9□□□□□ -0.98
NIPBL-201ENST00000282516 TCEA2Q15560 299 aa8.9□□□□□ -0.98
NIPBL-201ENST00000282516 TCHHL1Q5QJ38 904 aaPredicted RBP8.9□□□□□ -0.98
NIPBL-201ENST00000282516 FAM172AQ8WUF8 416 aa8.9□□□□□ -0.98
NIPBL-201ENST00000282516 REXO5Q96IC2 774 aaKnown RBP8.9□□□□□ -0.98
NIPBL-201ENST00000282516 DDX18Q9NVP1 670 aaKnown RBP8.9□□□□□ -0.98
NIPBL-201ENST00000282516 SHOC2Q9UQ13 582 aa8.9□□□□□ -0.98
NIPBL-201ENST00000282516 CPSF1Q10570 1443 aaKnown RBP8.9□□□□□ -0.98
NIPBL-201ENST00000282516 NKX1-1Q15270 411 aaPredicted RBP8.9□□□□□ -0.98
NIPBL-201ENST00000282516 TOMM20Q15388 145 aa8.9□□□□□ -0.98
NIPBL-201ENST00000282516 STK32CQ86UX6 486 aa8.9□□□□□ -0.98
NIPBL-201ENST00000282516 NEK7Q8TDX7 302 aa8.9□□□□□ -0.98
NIPBL-201ENST00000282516 COLEC11Q9BWP8 271 aa8.9□□□□□ -0.98
NIPBL-201ENST00000282516 TRIM2Q9C040 744 aa8.9□□□□□ -0.98
NIPBL-201ENST00000282516 UBP1Q9NZI7 540 aa8.9□□□□□ -0.98
NIPBL-201ENST00000282516 KIAA1257Q9ULG3 409 aa8.9□□□□□ -0.98
NIPBL-201ENST00000282516 ARID1BQ8NFD5 2236 aaPredicted RBP8.9□□□□□ -0.98
NIPBL-201ENST00000282516 PTGES3LE9PB15 166 aa8.9□□□□□ -0.98
NIPBL-201ENST00000282516 CYP2C9P11712 490 aa8.9□□□□□ -0.98
NIPBL-201ENST00000282516 SEC24CP53992 1094 aa8.9□□□□□ -0.98
NIPBL-201ENST00000282516 MTM1Q13496 603 aa8.9□□□□□ -0.98
NIPBL-201ENST00000282516 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.9□□□□□ -0.98
NIPBL-201ENST00000282516 ADSSL1Q8N142 457 aa8.9□□□□□ -0.98
NIPBL-201ENST00000282516 GGA3Q9NZ52 723 aa8.9□□□□□ -0.98
NIPBL-201ENST00000282516 KIF20BQ96Q89 1820 aa8.9□□□□□ -0.98
NIPBL-201ENST00000282516 ADCY6O43306 1168 aa8.9□□□□□ -0.99
NIPBL-201ENST00000282516 UPP2O95045 317 aa8.9□□□□□ -0.99
NIPBL-201ENST00000282516 CYP2A6P11509 494 aaPredicted RBP8.9□□□□□ -0.99
NIPBL-201ENST00000282516 SPP2Q13103 211 aa8.9□□□□□ -0.99
NIPBL-201ENST00000282516 MTAPQ13126 283 aa8.9□□□□□ -0.99
NIPBL-201ENST00000282516 DGCR6Q14129 220 aa8.9□□□□□ -0.99
NIPBL-201ENST00000282516 KBTBD7Q8WVZ9 684 aa8.9□□□□□ -0.99
NIPBL-201ENST00000282516 APOPT1Q96IL0 206 aa8.9□□□□□ -0.99
NIPBL-201ENST00000282516 B3GALT6Q96L58 329 aa8.9□□□□□ -0.99
NIPBL-201ENST00000282516 GPN1Q9HCN4 374 aaPredicted RBP8.9□□□□□ -0.99
NIPBL-201ENST00000282516 TMEM51Q9NW97 253 aa8.9□□□□□ -0.99
NIPBL-201ENST00000282516 TBC1D30Q9Y2I9 924 aa8.9□□□□□ -0.99
NIPBL-201ENST00000282516 WBP11Q9Y2W2 641 aaKnown RBP8.9□□□□□ -0.99
NIPBL-201ENST00000282516 NLRP1Q9C000 1473 aa8.9□□□□□ -0.99
NIPBL-201ENST00000282516 MCIDASD6RGH6 385 aa8.9□□□□□ -0.99
NIPBL-201ENST00000282516 M0QYT0 321 aa8.9□□□□□ -0.99
NIPBL-201ENST00000282516 HOXB6P17509 224 aaKnown RBP8.9□□□□□ -0.99
NIPBL-201ENST00000282516 PGAM1P18669 254 aa8.9□□□□□ -0.99
NIPBL-201ENST00000282516 TLX1P31314 330 aaPredicted RBP8.9□□□□□ -0.99
NIPBL-201ENST00000282516 MAGEA2P43356 314 aa8.9□□□□□ -0.99
NIPBL-201ENST00000282516 GCLCP48506 637 aaPredicted RBP8.9□□□□□ -0.99
NIPBL-201ENST00000282516 MPP3Q13368 585 aa8.9□□□□□ -0.99
NIPBL-201ENST00000282516 NAIF1Q69YI7 327 aaPredicted RBP8.9□□□□□ -0.99
NIPBL-201ENST00000282516 TTC27Q6P3X3 843 aa8.9□□□□□ -0.99
NIPBL-201ENST00000282516 MAGEC3Q8TD91 643 aa8.9□□□□□ -0.99
NIPBL-201ENST00000282516 TMEM169Q96HH4 297 aa8.9□□□□□ -0.99
NIPBL-201ENST00000282516 ATPIF1Q9UII2 106 aa8.9□□□□□ -0.99
NIPBL-201ENST00000282516 ANGPT4Q9Y264 503 aa8.9□□□□□ -0.99
NIPBL-201ENST00000282516 ALG6Q9Y672 507 aa8.9□□□□□ -0.99
NIPBL-201ENST00000282516 FGFR2P21802 821 aa8.9□□□□□ -0.99
NIPBL-201ENST00000282516 OR1G1P47890 313 aa8.9□□□□□ -0.99
NIPBL-201ENST00000282516 CD151P48509 253 aa8.9□□□□□ -0.99
NIPBL-201ENST00000282516 PDX1P52945 283 aa8.9□□□□□ -0.99
NIPBL-201ENST00000282516 CYB5R4Q7L1T6 521 aa8.9□□□□□ -0.99
NIPBL-201ENST00000282516 RP9Q8TA86 221 aaKnown RBP8.9□□□□□ -0.99
NIPBL-201ENST00000282516 CASKIN2Q8WXE0 1202 aa8.9□□□□□ -0.99
NIPBL-201ENST00000282516 WDR12Q9GZL7 423 aaKnown RBP8.9□□□□□ -0.99
NIPBL-201ENST00000282516 SLC35C2Q9NQQ7 365 aa8.9□□□□□ -0.99
NIPBL-201ENST00000282516 ZNF214Q9UL59 606 aaPredicted RBP8.9□□□□□ -0.99
NIPBL-201ENST00000282516 SLC34A1Q06495 639 aa8.89□□□□□ -0.99
NIPBL-201ENST00000282516 N4BP2L1Q5TBK1 243 aaPredicted RBP8.89□□□□□ -0.99
NIPBL-201ENST00000282516 AKAP14Q86UN6 197 aa8.89□□□□□ -0.99
NIPBL-201ENST00000282516 AADATQ8N5Z0 425 aa8.89□□□□□ -0.99
NIPBL-201ENST00000282516 MAGEE2Q8TD90 523 aaPredicted RBP8.89□□□□□ -0.99
NIPBL-201ENST00000282516 RSPH9Q9H1X1 276 aaPredicted RBP8.89□□□□□ -0.99
NIPBL-201ENST00000282516 ZNF232Q9UNY5 417 aa8.89□□□□□ -0.99
NIPBL-201ENST00000282516 COL15A1P39059 1388 aa8.89□□□□□ -0.99
NIPBL-201ENST00000282516 MYH15Q9Y2K3 1946 aa8.89□□□□□ -0.99
NIPBL-201ENST00000282516 RGS10O43665 173 aa8.89□□□□□ -0.99
NIPBL-201ENST00000282516 PCDH8O95206 1070 aa8.89□□□□□ -0.99
NIPBL-201ENST00000282516 KCNH1O95259 989 aa8.89□□□□□ -0.99
NIPBL-201ENST00000282516 BGNP21810 368 aa8.89□□□□□ -0.99
NIPBL-201ENST00000282516 ATP5F1P24539 256 aaPredicted RBP8.89□□□□□ -0.99
NIPBL-201ENST00000282516 ATN1P54259 1190 aaPredicted RBP8.89□□□□□ -0.99
NIPBL-201ENST00000282516 MSLNQ13421 630 aaPredicted RBP8.89□□□□□ -0.99
NIPBL-201ENST00000282516 MKRN4PQ13434 485 aaPredicted RBP8.89□□□□□ -0.99
NIPBL-201ENST00000282516 TMPRSS6Q8IU80 811 aa8.89□□□□□ -0.99
NIPBL-201ENST00000282516 MID1IP1Q9NPA3 183 aa8.89□□□□□ -0.99
NIPBL-201ENST00000282516 CAMSAP1Q5T5Y3 1602 aa8.89□□□□□ -0.99
NIPBL-201ENST00000282516 ITGA2P17301 1181 aa8.89□□□□□ -0.99
NIPBL-201ENST00000282516 UGT1A5P35504 534 aa8.89□□□□□ -0.99
NIPBL-201ENST00000282516 RPL3P39023 403 aaKnown RBP8.89□□□□□ -0.99
NIPBL-201ENST00000282516 DNAJC14Q6Y2X3 702 aaPredicted RBP8.89□□□□□ -0.99
NIPBL-201ENST00000282516 PIK3C3Q8NEB9 887 aa8.89□□□□□ -0.99
NIPBL-201ENST00000282516 ANKS1AQ92625 1134 aa8.89□□□□□ -0.99
NIPBL-201ENST00000282516 GRIP2Q9C0E4 1043 aa8.89□□□□□ -0.99
NIPBL-201ENST00000282516 A0A1W2PQ72 361 aa8.89□□□□□ -0.99
NIPBL-201ENST00000282516 ALOX5P09917 674 aa8.89□□□□□ -0.99
NIPBL-201ENST00000282516 HOXB8P17481 243 aaPredicted RBP8.89□□□□□ -0.99
NIPBL-201ENST00000282516 TYMPP19971 482 aa8.89□□□□□ -0.99
NIPBL-201ENST00000282516 CLK2P49760 499 aaKnown RBP8.89□□□□□ -0.99
NIPBL-201ENST00000282516 GALNT18Q6P9A2 607 aa8.89□□□□□ -0.99
NIPBL-201ENST00000282516 SGMS1Q86VZ5 419 aa8.89□□□□□ -0.99
NIPBL-201ENST00000282516 ZNF276Q8N554 614 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms