RNA–Protein interactions for RNA: ENST00000277657.12

CCDC7-201, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-201ENST00000277657 MAGOHP61326 146 aaKnown RBP22.69■■□□□ 1.22
CCDC7-201ENST00000277657 RAB33AQ14088 237 aa22.69■■□□□ 1.22
CCDC7-201ENST00000277657 BBS9Q3SYG4 887 aa22.69■■□□□ 1.22
CCDC7-201ENST00000277657 DNAJC21Q5F1R6 531 aaKnown RBP22.69■■□□□ 1.22
CCDC7-201ENST00000277657 PIK3R6Q5UE93 754 aa22.69■■□□□ 1.22
CCDC7-201ENST00000277657 SNX30Q5VWJ9 437 aa22.69■■□□□ 1.22
CCDC7-201ENST00000277657 ANKMY2Q8IV38 441 aa22.69■■□□□ 1.22
CCDC7-201ENST00000277657 OVCA2Q8WZ82 227 aa22.69■■□□□ 1.22
CCDC7-201ENST00000277657 CCDC77Q9BR77 488 aa22.69■■□□□ 1.22
CCDC7-201ENST00000277657 CATSPERBQ9H7T0 1116 aa22.69■■□□□ 1.22
CCDC7-201ENST00000277657 NUP205Q92621 2012 aa22.69■■□□□ 1.22
CCDC7-201ENST00000277657 E9PAM4 449 aa22.68■■□□□ 1.22
CCDC7-201ENST00000277657 URODP06132 367 aa22.68■■□□□ 1.22
CCDC7-201ENST00000277657 IVLP07476 585 aa22.68■■□□□ 1.22
CCDC7-201ENST00000277657 TSHRP16473 764 aa22.68■■□□□ 1.22
CCDC7-201ENST00000277657 PPM1AP35813 382 aa22.68■■□□□ 1.22
CCDC7-201ENST00000277657 GPX6P59796 221 aa22.68■■□□□ 1.22
CCDC7-201ENST00000277657 ZNF33AQ06730 810 aa22.68■■□□□ 1.22
CCDC7-201ENST00000277657 SYCP2LQ5T4T6 812 aa22.68■■□□□ 1.22
CCDC7-201ENST00000277657 CAND1Q86VP6 1230 aaKnown RBP22.68■■□□□ 1.22
CCDC7-201ENST00000277657 GPR65Q8IYL9 337 aa22.68■■□□□ 1.22
CCDC7-201ENST00000277657 ZNF567Q8N184 647 aa22.68■■□□□ 1.22
CCDC7-201ENST00000277657 ATP11CQ8NB49 1132 aa22.68■■□□□ 1.22
CCDC7-201ENST00000277657 DPF3Q92784 378 aa22.68■■□□□ 1.22
CCDC7-201ENST00000277657 MAGED2Q9UNF1 606 aaPredicted RBP22.68■■□□□ 1.22
CCDC7-201ENST00000277657 TEX264Q9Y6I9 313 aa22.68■■□□□ 1.22
CCDC7-201ENST00000277657 E7EVH7 732 aa22.68■■□□□ 1.22
CCDC7-201ENST00000277657 MTSS1O43312 755 aa22.68■■□□□ 1.22
CCDC7-201ENST00000277657 TLR5O60602 858 aa22.68■■□□□ 1.22
CCDC7-201ENST00000277657 APOEP02649 317 aa22.68■■□□□ 1.22
CCDC7-201ENST00000277657 HTRA4P83105 476 aaPredicted RBP22.68■■□□□ 1.22
CCDC7-201ENST00000277657 RING1Q06587 406 aa22.68■■□□□ 1.22
CCDC7-201ENST00000277657 CCDC38Q502W7 563 aa22.68■■□□□ 1.22
CCDC7-201ENST00000277657 C14orf80Q86SX3 495 aa22.68■■□□□ 1.22
CCDC7-201ENST00000277657 ZNF683Q8IZ20 524 aa22.68■■□□□ 1.22
CCDC7-201ENST00000277657 LZTR1Q8N653 840 aa22.68■■□□□ 1.22
CCDC7-201ENST00000277657 FBXO36Q8NEA4 188 aa22.68■■□□□ 1.22
CCDC7-201ENST00000277657 PDZD8Q8NEN9 1154 aa22.68■■□□□ 1.22
CCDC7-201ENST00000277657 STMN4Q9H169 189 aaPredicted RBP22.68■■□□□ 1.22
CCDC7-201ENST00000277657 CCSER2Q9H7U1 834 aa22.68■■□□□ 1.22
CCDC7-201ENST00000277657 ZKSCAN7Q9P0L1 754 aaPredicted RBP22.68■■□□□ 1.22
CCDC7-201ENST00000277657 IGSF9Q9P2J2 1179 aa22.68■■□□□ 1.22
CCDC7-201ENST00000277657 WASH4PA8MWX3 477 aa22.67■■□□□ 1.22
CCDC7-201ENST00000277657 SHOX2O60902 331 aaPredicted RBP22.67■■□□□ 1.22
CCDC7-201ENST00000277657 GJB5O95377 273 aa22.67■■□□□ 1.22
CCDC7-201ENST00000277657 HMGA1P17096 107 aaKnown RBP22.67■■□□□ 1.22
CCDC7-201ENST00000277657 PTPN3P26045 913 aa22.67■■□□□ 1.22
CCDC7-201ENST00000277657 MAGEA3P43357 314 aa22.67■■□□□ 1.22
CCDC7-201ENST00000277657 TUBP50607 506 aa22.67■■□□□ 1.22
CCDC7-201ENST00000277657 PARP6Q2NL67 630 aa22.67■■□□□ 1.22
CCDC7-201ENST00000277657 MIB1Q86YT6 1006 aa22.67■■□□□ 1.22
CCDC7-201ENST00000277657 ARHGAP12Q8IWW6 846 aa22.67■■□□□ 1.22
CCDC7-201ENST00000277657 ARFGAP2Q8N6H7 521 aa22.67■■□□□ 1.22
CCDC7-201ENST00000277657 BTN2A3PQ96KV6 586 aa22.67■■□□□ 1.22
CCDC7-201ENST00000277657 MYRFLQ96LU7 910 aa22.67■■□□□ 1.22
CCDC7-201ENST00000277657 CDK5RAP1Q96SZ6 601 aaKnown RBP22.67■■□□□ 1.22
CCDC7-201ENST00000277657 VPS37BQ9H9H4 285 aa22.67■■□□□ 1.22
CCDC7-201ENST00000277657 EURLQ9NYK6 297 aa22.67■■□□□ 1.22
CCDC7-201ENST00000277657 SEPT10Q9P0V9 454 aa22.67■■□□□ 1.22
CCDC7-201ENST00000277657 LGALS13Q9UHV8 139 aa22.67■■□□□ 1.22
CCDC7-201ENST00000277657 KCNK1O00180 336 aa22.66■■□□□ 1.22
CCDC7-201ENST00000277657 LINC00271P0C7V0 271 aa22.66■■□□□ 1.22
CCDC7-201ENST00000277657 HPDP32754 393 aaPredicted RBP22.66■■□□□ 1.22
CCDC7-201ENST00000277657 IFI35P80217 286 aaPredicted RBP22.66■■□□□ 1.22
CCDC7-201ENST00000277657 CDK16Q00536 496 aa22.66■■□□□ 1.22
CCDC7-201ENST00000277657 PPIGQ13427 754 aaKnown RBP eCLIP22.66■■□□□ 1.22
CCDC7-201ENST00000277657 MS4A13Q5J8X5 152 aa22.66■■□□□ 1.22
CCDC7-201ENST00000277657 ZNF534Q76KX8 674 aa22.66■■□□□ 1.22
CCDC7-201ENST00000277657 IGDCC3Q8IVU1 814 aa22.66■■□□□ 1.22
CCDC7-201ENST00000277657 AGGF1Q8N302 714 aaeCLIP22.66■■□□□ 1.22
CCDC7-201ENST00000277657 ATP6V0D2Q8N8Y2 350 aa22.66■■□□□ 1.22
CCDC7-201ENST00000277657 CYP4F11Q9HBI6 524 aa22.66■■□□□ 1.22
CCDC7-201ENST00000277657 EIF2B3Q9NR50 452 aaKnown RBP22.66■■□□□ 1.22
CCDC7-201ENST00000277657 STK39Q9UEW8 545 aa22.66■■□□□ 1.22
CCDC7-201ENST00000277657 SLC12A6Q9UHW9 1150 aa22.66■■□□□ 1.22
CCDC7-201ENST00000277657 YIPF1Q9Y548 306 aa22.66■■□□□ 1.22
CCDC7-201ENST00000277657 MYO18AQ92614 2054 aaKnown RBP22.66■■□□□ 1.22
CCDC7-201ENST00000277657 SLC12A8A0AV02 714 aa22.66■■□□□ 1.22
CCDC7-201ENST00000277657 AVILO75366 819 aa22.66■■□□□ 1.22
CCDC7-201ENST00000277657 FGBP02675 491 aa22.66■■□□□ 1.22
CCDC7-201ENST00000277657 CSH1P0DML2 217 aa22.66■■□□□ 1.22
CCDC7-201ENST00000277657 CSH2P0DML3 217 aa22.66■■□□□ 1.22
CCDC7-201ENST00000277657 ELK3P41970 407 aa22.66■■□□□ 1.22
CCDC7-201ENST00000277657 LMAN1P49257 510 aa22.66■■□□□ 1.22
CCDC7-201ENST00000277657 ATP1A2P50993 1020 aa22.66■■□□□ 1.22
CCDC7-201ENST00000277657 KPNA1P52294 538 aaPredicted RBP22.66■■□□□ 1.22
CCDC7-201ENST00000277657 PPP2R2AP63151 447 aa22.66■■□□□ 1.22
CCDC7-201ENST00000277657 MTM1Q13496 603 aa22.66■■□□□ 1.22
CCDC7-201ENST00000277657 ACBD5Q5T8D3 534 aaPredicted RBP22.66■■□□□ 1.22
CCDC7-201ENST00000277657 AFMIDQ63HM1 303 aa22.66■■□□□ 1.22
CCDC7-201ENST00000277657 RTL3Q8N8U3 475 aaKnown RBP22.66■■□□□ 1.22
CCDC7-201ENST00000277657 CELF6Q96J87 481 aaKnown RBP22.66■■□□□ 1.22
CCDC7-201ENST00000277657 TSGA13Q96PP4 275 aa22.66■■□□□ 1.22
CCDC7-201ENST00000277657 CEP41Q9BYV8 373 aa22.66■■□□□ 1.22
CCDC7-201ENST00000277657 FNIP2Q9P278 1114 aa22.66■■□□□ 1.22
CCDC7-201ENST00000277657 PCDHB12Q9Y5F1 795 aa22.66■■□□□ 1.22
CCDC7-201ENST00000277657 LILRB3O75022 631 aa22.65■■□□□ 1.22
CCDC7-201ENST00000277657 CDH16O75309 829 aa22.65■■□□□ 1.22
CCDC7-201ENST00000277657 PHBP35232 272 aa22.65■■□□□ 1.22
CCDC7-201ENST00000277657 COG7P83436 770 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms