RNA–Protein interactions for RNA: ENST00000272793.9

UBR3-201, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBR3, Length 8,005 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-201ENST00000272793 UBQLN1Q9UMX0 589 aaKnown RBP16.08■□□□□ 0.16
UBR3-201ENST00000272793 COG5Q9UP83 839 aa16.08■□□□□ 0.16
UBR3-201ENST00000272793 C9P02748 559 aa16.08■□□□□ 0.16
UBR3-201ENST00000272793 ILF3Q12906 894 aaKnown RBP eCLIP16.08■□□□□ 0.16
UBR3-201ENST00000272793 DEFB107AQ8IZN7 70 aa16.08■□□□□ 0.16
UBR3-201ENST00000272793 KCNB2Q92953 911 aa16.08■□□□□ 0.16
UBR3-201ENST00000272793 ZNF471Q9BX82 626 aaPredicted RBP16.08■□□□□ 0.16
UBR3-201ENST00000272793 SENP6Q9GZR1 1112 aaPredicted RBP16.08■□□□□ 0.16
UBR3-201ENST00000272793 RHBGQ9H310 441 aa16.08■□□□□ 0.16
UBR3-201ENST00000272793 PCDHA6Q9UN73 950 aa16.08■□□□□ 0.16
UBR3-201ENST00000272793 PCDHA8Q9Y5H6 950 aa16.08■□□□□ 0.16
UBR3-201ENST00000272793 ATXN2Q99700 1313 aaKnown RBP16.07■□□□□ 0.16
UBR3-201ENST00000272793 PDE8BO95263 885 aa16.07■□□□□ 0.16
UBR3-201ENST00000272793 DBTP11182 482 aaKnown RBP16.07■□□□□ 0.16
UBR3-201ENST00000272793 TUBG1P23258 451 aa16.07■□□□□ 0.16
UBR3-201ENST00000272793 ADD2P35612 726 aa16.07■□□□□ 0.16
UBR3-201ENST00000272793 TMEM132BQ14DG7 1078 aa16.07■□□□□ 0.16
UBR3-201ENST00000272793 GXYLT1Q4G148 440 aa16.07■□□□□ 0.16
UBR3-201ENST00000272793 MRNIPQ6NTE8 343 aa16.07■□□□□ 0.16
UBR3-201ENST00000272793 B3GNT6Q6ZMB0 384 aa16.07■□□□□ 0.16
UBR3-201ENST00000272793 DNAJA4Q8WW22 397 aaPredicted RBP16.07■□□□□ 0.16
UBR3-201ENST00000272793 TRIM43Q96BQ3 446 aaPredicted RBP16.07■□□□□ 0.16
UBR3-201ENST00000272793 VPS45Q9NRW7 570 aa16.07■□□□□ 0.16
UBR3-201ENST00000272793 PI4KBQ9UBF8 816 aa16.07■□□□□ 0.16
UBR3-201ENST00000272793 KIF20BQ96Q89 1820 aa16.07■□□□□ 0.16
UBR3-201ENST00000272793 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.07■□□□□ 0.16
UBR3-201ENST00000272793 RAB4AP20338 218 aa16.07■□□□□ 0.16
UBR3-201ENST00000272793 MLLT6P55198 1093 aaPredicted RBP16.07■□□□□ 0.16
UBR3-201ENST00000272793 ZNF177Q13360 481 aaPredicted RBP16.07■□□□□ 0.16
UBR3-201ENST00000272793 PTGES3Q15185 160 aaKnown RBP16.07■□□□□ 0.16
UBR3-201ENST00000272793 SLC4A11Q8NBS3 891 aa16.07■□□□□ 0.16
UBR3-201ENST00000272793 ERLEC1Q96DZ1 483 aa16.07■□□□□ 0.16
UBR3-201ENST00000272793 ZNF225Q9UK10 706 aa16.07■□□□□ 0.16
UBR3-201ENST00000272793 MROH7-TTC4A0A0A0MT08 1334 aa16.07■□□□□ 0.16
UBR3-201ENST00000272793 MROH7Q68CQ1 1323 aa16.07■□□□□ 0.16
UBR3-201ENST00000272793 ATF6P18850 670 aa16.07■□□□□ 0.16
UBR3-201ENST00000272793 IL13P35225 146 aa16.07■□□□□ 0.16
UBR3-201ENST00000272793 SCGB2A2Q13296 93 aa16.07■□□□□ 0.16
UBR3-201ENST00000272793 ARMC8Q8IUR7 673 aa16.07■□□□□ 0.16
UBR3-201ENST00000272793 FAM71DQ8N9W8 422 aa16.07■□□□□ 0.16
UBR3-201ENST00000272793 ZBTB8BQ8NAP8 495 aaPredicted RBP16.07■□□□□ 0.16
UBR3-201ENST00000272793 LRRC20Q8TCA0 184 aa16.07■□□□□ 0.16
UBR3-201ENST00000272793 ZMYM5Q9UJ78 669 aa16.07■□□□□ 0.16
UBR3-201ENST00000272793 CLOCKO15516 846 aa16.07■□□□□ 0.16
UBR3-201ENST00000272793 OR10H2O60403 315 aa16.07■□□□□ 0.16
UBR3-201ENST00000272793 METTL18O95568 372 aa16.07■□□□□ 0.16
UBR3-201ENST00000272793 SKP1P63208 163 aa16.07■□□□□ 0.16
UBR3-201ENST00000272793 FNIP1Q8TF40 1166 aa16.07■□□□□ 0.16
UBR3-201ENST00000272793 RAD54LQ92698 747 aa16.07■□□□□ 0.16
UBR3-201ENST00000272793 RAB23Q9ULC3 237 aa16.07■□□□□ 0.16
UBR3-201ENST00000272793 CYP2C8P10632 490 aa16.07■□□□□ 0.16
UBR3-201ENST00000272793 CALB2P22676 271 aa16.07■□□□□ 0.16
UBR3-201ENST00000272793 POLD2P49005 469 aa16.07■□□□□ 0.16
UBR3-201ENST00000272793 MARSP56192 900 aaKnown RBP16.07■□□□□ 0.16
UBR3-201ENST00000272793 INO80EQ8NBZ0 244 aaPredicted RBP16.07■□□□□ 0.16
UBR3-201ENST00000272793 PRCCQ92733 491 aaPredicted RBP16.07■□□□□ 0.16
UBR3-201ENST00000272793 AGPAT1Q99943 283 aa16.07■□□□□ 0.16
UBR3-201ENST00000272793 PIK3C2GO75747 1445 aa16.07■□□□□ 0.16
UBR3-201ENST00000272793 FCHO1O14526 889 aa16.07■□□□□ 0.16
UBR3-201ENST00000272793 CCNT2O60583 730 aaKnown RBP16.07■□□□□ 0.16
UBR3-201ENST00000272793 PDGFRAP16234 1089 aa16.07■□□□□ 0.16
UBR3-201ENST00000272793 HSD17B2P37059 387 aa16.07■□□□□ 0.16
UBR3-201ENST00000272793 TMEM132DQ14C87 1099 aa16.07■□□□□ 0.16
UBR3-201ENST00000272793 OR52K2Q8NGK3 314 aa16.07■□□□□ 0.16
UBR3-201ENST00000272793 OR6Y1Q8NGX8 325 aa16.07■□□□□ 0.16
UBR3-201ENST00000272793 PTCD2Q8WV60 388 aaKnown RBP16.07■□□□□ 0.16
UBR3-201ENST00000272793 DPF1Q92782 380 aa16.07■□□□□ 0.16
UBR3-201ENST00000272793 RRN3Q9NYV6 651 aa16.07■□□□□ 0.16
UBR3-201ENST00000272793 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.07■□□□□ 0.169e-8■□□□□ 9.1
UBR3-201ENST00000272793 SPAG17Q6Q759 2223 aa16.06■□□□□ 0.16
UBR3-201ENST00000272793 USP17L15C9J2P7 530 aa16.06■□□□□ 0.16
UBR3-201ENST00000272793 USP17L13C9JLJ4 530 aa16.06■□□□□ 0.16
UBR3-201ENST00000272793 USP17L11C9JVI0 530 aa16.06■□□□□ 0.16
UBR3-201ENST00000272793 USP17L18D6R9N7 530 aa16.06■□□□□ 0.16
UBR3-201ENST00000272793 USP17L22D6RA61 530 aa16.06■□□□□ 0.16
UBR3-201ENST00000272793 USP17L17D6RBQ6 530 aa16.06■□□□□ 0.16
UBR3-201ENST00000272793 USP17L19D6RCP7 530 aa16.06■□□□□ 0.16
UBR3-201ENST00000272793 USP17L20D6RJB6 530 aa16.06■□□□□ 0.16
UBR3-201ENST00000272793 MID1O15344 667 aa16.06■□□□□ 0.16
UBR3-201ENST00000272793 ATMINO43313 823 aaPredicted RBP16.06■□□□□ 0.16
UBR3-201ENST00000272793 EPORP19235 508 aa16.06■□□□□ 0.16
UBR3-201ENST00000272793 CD40LGP29965 261 aa16.06■□□□□ 0.16
UBR3-201ENST00000272793 TMEM62Q0P6H9 643 aa16.06■□□□□ 0.16
UBR3-201ENST00000272793 USP17L24Q0WX57 530 aa16.06■□□□□ 0.16
UBR3-201ENST00000272793 SP140Q13342 867 aa16.06■□□□□ 0.16
UBR3-201ENST00000272793 KCNB1Q14721 858 aa16.06■□□□□ 0.16
UBR3-201ENST00000272793 USP17L6PQ6QN14 398 aa16.06■□□□□ 0.16
UBR3-201ENST00000272793 DHRSXQ8N5I4 330 aa16.06■□□□□ 0.16
UBR3-201ENST00000272793 AMER2Q8N7J2 671 aa16.06■□□□□ 0.16
UBR3-201ENST00000272793 GFM1Q96RP9 751 aaKnown RBP16.06■□□□□ 0.16
UBR3-201ENST00000272793 ACTR8Q9H981 624 aa16.06■□□□□ 0.16
UBR3-201ENST00000272793 PCDH12Q9NPG4 1184 aa16.06■□□□□ 0.16
UBR3-201ENST00000272793 ALKBH4Q9NXW9 302 aa16.06■□□□□ 0.16
UBR3-201ENST00000272793 PHTF1Q9UMS5 762 aa16.06■□□□□ 0.16
UBR3-201ENST00000272793 SCAMP1O15126 338 aa16.06■□□□□ 0.16
UBR3-201ENST00000272793 PTGISQ16647 500 aa16.06■□□□□ 0.16
UBR3-201ENST00000272793 KYAT1Q16773 422 aa16.06■□□□□ 0.16
UBR3-201ENST00000272793 OAFQ86UD1 273 aa16.06■□□□□ 0.16
UBR3-201ENST00000272793 CHST4Q8NCG5 386 aa16.06■□□□□ 0.16
UBR3-201ENST00000272793 SPATA9Q9BWV2 254 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms