RNA–Protein interactions for RNA: ENST00000269347.10

RAB40B-201, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 2,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-201ENST00000269347 F9P00740 461 aa23.79■■□□□ 1.4
RAB40B-201ENST00000269347 APOEP02649 317 aa23.79■■□□□ 1.4
RAB40B-201ENST00000269347 F7P08709 466 aaPredicted RBP23.79■■□□□ 1.4
RAB40B-201ENST00000269347 MGAT1P26572 445 aa23.79■■□□□ 1.4
RAB40B-201ENST00000269347 LIG3P49916 1009 aa23.79■■□□□ 1.4
RAB40B-201ENST00000269347 SESN2P58004 480 aaPredicted RBP23.79■■□□□ 1.4
RAB40B-201ENST00000269347 PPIDQ08752 370 aaKnown RBP23.79■■□□□ 1.4
RAB40B-201ENST00000269347 FAM47EQ6ZV65 393 aa23.79■■□□□ 1.4
RAB40B-201ENST00000269347 URGCPQ8TCY9 931 aa23.79■■□□□ 1.4
RAB40B-201ENST00000269347 RNF34Q969K3 372 aa23.79■■□□□ 1.4
RAB40B-201ENST00000269347 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.78■■□□□ 1.4
RAB40B-201ENST00000269347 BMPR2Q13873 1038 aa23.78■■□□□ 1.4
RAB40B-201ENST00000269347 MAPRE1Q15691 268 aaKnown RBP23.78■■□□□ 1.4
RAB40B-201ENST00000269347 FAM171A1Q5VUB5 890 aa23.78■■□□□ 1.4
RAB40B-201ENST00000269347 CES3Q6UWW8 571 aa23.78■■□□□ 1.4
RAB40B-201ENST00000269347 CDHR3Q6ZTQ4 885 aa23.78■■□□□ 1.4
RAB40B-201ENST00000269347 PID1Q7Z2X4 250 aa23.78■■□□□ 1.4
RAB40B-201ENST00000269347 C14orf80Q86SX3 495 aa23.78■■□□□ 1.4
RAB40B-201ENST00000269347 CTAGE3PQ8IX95 158 aa23.78■■□□□ 1.4
RAB40B-201ENST00000269347 TCP10LQ8TDR4 215 aa23.78■■□□□ 1.4
RAB40B-201ENST00000269347 RRN3Q9NYV6 651 aa23.78■■□□□ 1.4
RAB40B-201ENST00000269347 DNM1LO00429 736 aa23.78■■□□□ 1.4
RAB40B-201ENST00000269347 OPHN1O60890 802 aa23.78■■□□□ 1.4
RAB40B-201ENST00000269347 FKTNO75072 461 aa23.78■■□□□ 1.4
RAB40B-201ENST00000269347 PAGE1O75459 146 aa23.78■■□□□ 1.4
RAB40B-201ENST00000269347 TADA2AO75478 443 aa23.78■■□□□ 1.4
RAB40B-201ENST00000269347 CPP00450 1065 aa23.78■■□□□ 1.4
RAB40B-201ENST00000269347 SLC11A1P49279 550 aa23.78■■□□□ 1.4
RAB40B-201ENST00000269347 ARL13BQ3SXY8 428 aa23.78■■□□□ 1.4
RAB40B-201ENST00000269347 RNF187Q5TA31 235 aaPredicted RBP23.78■■□□□ 1.4
RAB40B-201ENST00000269347 LVRNQ6Q4G3 990 aa23.78■■□□□ 1.4
RAB40B-201ENST00000269347 C4orf50Q6ZRC1 276 aa23.78■■□□□ 1.4
RAB40B-201ENST00000269347 BZW1Q7L1Q6 419 aaKnown RBP23.78■■□□□ 1.4
RAB40B-201ENST00000269347 OTUD6BQ8N6M0 293 aa23.78■■□□□ 1.4
RAB40B-201ENST00000269347 THOC1Q96FV9 657 aaKnown RBP23.78■■□□□ 1.4
RAB40B-201ENST00000269347 MLPHQ9BV36 600 aaPredicted RBP23.78■■□□□ 1.4
RAB40B-201ENST00000269347 GGA2Q9UJY4 613 aa23.78■■□□□ 1.4
RAB40B-201ENST00000269347 SLC27A5Q9Y2P5 690 aa23.78■■□□□ 1.4
RAB40B-201ENST00000269347 TRIM17Q9Y577 477 aa23.78■■□□□ 1.4
RAB40B-201ENST00000269347 PPP1R12AO14974 1030 aaPredicted RBP23.77■■□□□ 1.4
RAB40B-201ENST00000269347 GALNT2Q10471 571 aa23.77■■□□□ 1.4
RAB40B-201ENST00000269347 DNAJC3Q13217 504 aa23.77■■□□□ 1.4
RAB40B-201ENST00000269347 MRPL58Q14197 206 aaKnown RBP23.77■■□□□ 1.4
RAB40B-201ENST00000269347 BTBD8Q5XKL5 378 aa23.77■■□□□ 1.4
RAB40B-201ENST00000269347 C4orf22Q6V702 233 aa23.77■■□□□ 1.4
RAB40B-201ENST00000269347 SGSM3Q96HU1 749 aa23.77■■□□□ 1.4
RAB40B-201ENST00000269347 PPCSQ9HAB8 311 aa23.77■■□□□ 1.4
RAB40B-201ENST00000269347 SYBUQ9NX95 663 aa23.77■■□□□ 1.4
RAB40B-201ENST00000269347 ATP2A2P16615 1042 aaKnown RBP23.76■■□□□ 1.39
RAB40B-201ENST00000269347 FDFT1P37268 417 aa23.76■■□□□ 1.39
RAB40B-201ENST00000269347 GARSP41250 739 aaKnown RBP23.76■■□□□ 1.39
RAB40B-201ENST00000269347 RTP2Q5QGT7 225 aa23.76■■□□□ 1.39
RAB40B-201ENST00000269347 ARHGAP12Q8IWW6 846 aa23.76■■□□□ 1.39
RAB40B-201ENST00000269347 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP23.76■■□□□ 1.39
RAB40B-201ENST00000269347 CCDC197Q8NCU1 140 aa23.76■■□□□ 1.39
RAB40B-201ENST00000269347 CCT6BQ92526 530 aa23.76■■□□□ 1.39
RAB40B-201ENST00000269347 FAM193BQ96PV7 902 aaPredicted RBP23.76■■□□□ 1.39
RAB40B-201ENST00000269347 FRMD8Q9BZ67 464 aaPredicted RBP23.76■■□□□ 1.39
RAB40B-201ENST00000269347 SMOC2Q9H3U7 446 aa23.76■■□□□ 1.39
RAB40B-201ENST00000269347 ABCC13Q9NSE7 274 aa23.76■■□□□ 1.39
RAB40B-201ENST00000269347 IGSF9Q9P2J2 1179 aa23.76■■□□□ 1.39
RAB40B-201ENST00000269347 ADAM28Q9UKQ2 775 aa23.76■■□□□ 1.39
RAB40B-201ENST00000269347 TBX18O95935 607 aa23.76■■□□□ 1.39
RAB40B-201ENST00000269347 PYGBP11216 843 aa23.76■■□□□ 1.39
RAB40B-201ENST00000269347 ARPP19P56211 112 aa23.76■■□□□ 1.39
RAB40B-201ENST00000269347 MGAT5Q09328 741 aa23.76■■□□□ 1.39
RAB40B-201ENST00000269347 PARP6Q2NL67 630 aa23.76■■□□□ 1.39
RAB40B-201ENST00000269347 MANEALQ5VSG8 457 aa23.76■■□□□ 1.39
RAB40B-201ENST00000269347 RWDD4Q6NW29 188 aaKnown RBP23.76■■□□□ 1.39
RAB40B-201ENST00000269347 LRRC8BQ6P9F7 803 aa23.76■■□□□ 1.39
RAB40B-201ENST00000269347 MICALL1Q8N3F8 863 aa23.76■■□□□ 1.39
RAB40B-201ENST00000269347 ALG13Q9NP73 1137 aaKnown RBP23.76■■□□□ 1.39
RAB40B-201ENST00000269347 SENP1Q9P0U3 644 aa23.76■■□□□ 1.39
RAB40B-201ENST00000269347 KLHL8Q9P2G9 620 aaPredicted RBP23.76■■□□□ 1.39
RAB40B-201ENST00000269347 PCDHA11Q9Y5I1 949 aa23.76■■□□□ 1.39
RAB40B-201ENST00000269347 WDR91A4D1P6 747 aa23.75■■□□□ 1.39
RAB40B-201ENST00000269347 FAM159BA6NKW6 160 aa23.75■■□□□ 1.39
RAB40B-201ENST00000269347 TRIM49D1C9J1S8 452 aa23.75■■□□□ 1.39
RAB40B-201ENST00000269347 PQBP1O60828 265 aaKnown RBP23.75■■□□□ 1.39
RAB40B-201ENST00000269347 TOP3BO95985 862 aaKnown RBP23.75■■□□□ 1.39
RAB40B-201ENST00000269347 MOCS2O96007 188 aaPredicted RBP23.75■■□□□ 1.39
RAB40B-201ENST00000269347 SLC18A1P54219 525 aa23.75■■□□□ 1.39
RAB40B-201ENST00000269347 CTXN3Q4LDR2 81 aa23.75■■□□□ 1.39
RAB40B-201ENST00000269347 CNTD1Q8N815 330 aa23.75■■□□□ 1.39
RAB40B-201ENST00000269347 OR52K1Q8NGK4 314 aa23.75■■□□□ 1.39
RAB40B-201ENST00000269347 HDAC11Q96DB2 347 aa23.75■■□□□ 1.39
RAB40B-201ENST00000269347 EPAS1Q99814 870 aa23.75■■□□□ 1.39
RAB40B-201ENST00000269347 PRDM16Q9HAZ2 1276 aa23.75■■□□□ 1.39
RAB40B-201ENST00000269347 ABCF3Q9NUQ8 709 aa23.75■■□□□ 1.39
RAB40B-201ENST00000269347 MOCS1Q9NZB8 636 aa23.75■■□□□ 1.39
RAB40B-201ENST00000269347 UBP1Q9NZI7 540 aa23.75■■□□□ 1.39
RAB40B-201ENST00000269347 GMIPQ9P107 970 aa23.75■■□□□ 1.39
RAB40B-201ENST00000269347 SMG5Q9UPR3 1016 aaKnown RBP23.75■■□□□ 1.39
RAB40B-201ENST00000269347 INHBAP08476 426 aa23.75■■□□□ 1.39
RAB40B-201ENST00000269347 ATN1P54259 1190 aaPredicted RBP23.75■■□□□ 1.39
RAB40B-201ENST00000269347 CCL23P55773 120 aa23.75■■□□□ 1.39
RAB40B-201ENST00000269347 YTHDF3Q7Z739 585 aaKnown RBP23.75■■□□□ 1.39
RAB40B-201ENST00000269347 SLC26A11Q86WA9 606 aa23.75■■□□□ 1.39
RAB40B-201ENST00000269347 GSDMBQ8TAX9 411 aa23.75■■□□□ 1.39
RAB40B-201ENST00000269347 USP33Q8TEY7 942 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms