RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 SLC39A5Q6ZMH5 540 aa17.09■□□□□ 0.33
CCDC40-201ENST00000269318 UNC5AQ6ZN44 842 aa17.09■□□□□ 0.33
CCDC40-201ENST00000269318 DENND1AQ8TEH3 1009 aa17.09■□□□□ 0.33
CCDC40-201ENST00000269318 BCL7CQ8WUZ0 217 aaPredicted RBP17.09■□□□□ 0.33
CCDC40-201ENST00000269318 CKAP2Q8WWK9 683 aa17.09■□□□□ 0.33
CCDC40-201ENST00000269318 GORASP1Q9BQQ3 440 aa17.09■□□□□ 0.33
CCDC40-201ENST00000269318 MLXIPLQ9NP71 852 aa17.09■□□□□ 0.33
CCDC40-201ENST00000269318 NUDT5Q9UKK9 219 aa17.09■□□□□ 0.33
CCDC40-201ENST00000269318 MTMR11A4FU01 709 aa17.08■□□□□ 0.33
CCDC40-201ENST00000269318 NT5C1B-RDH14C9J2C7 533 aa17.08■□□□□ 0.33
CCDC40-201ENST00000269318 TRDMT1O14717 391 aaKnown RBP17.08■□□□□ 0.33
CCDC40-201ENST00000269318 CPP00450 1065 aa17.08■□□□□ 0.33
CCDC40-201ENST00000269318 HTR7P34969 479 aa17.08■□□□□ 0.33
CCDC40-201ENST00000269318 PBX3P40426 434 aa17.08■□□□□ 0.33
CCDC40-201ENST00000269318 SARNPP82979 210 aaKnown RBP17.08■□□□□ 0.33
CCDC40-201ENST00000269318 ELAVL2Q12926 359 aaKnown RBP17.08■□□□□ 0.33
CCDC40-201ENST00000269318 GPR17Q13304 367 aa17.08■□□□□ 0.33
CCDC40-201ENST00000269318 LRRC8BQ6P9F7 803 aa17.08■□□□□ 0.33
CCDC40-201ENST00000269318 LRRC34Q8IZ02 419 aa17.08■□□□□ 0.33
CCDC40-201ENST00000269318 SGSM3Q96HU1 749 aa17.08■□□□□ 0.33
CCDC40-201ENST00000269318 SERPINB11Q96P15 392 aa17.08■□□□□ 0.33
CCDC40-201ENST00000269318 SMC6Q96SB8 1091 aa17.08■□□□□ 0.33
CCDC40-201ENST00000269318 SIK2Q9H0K1 926 aa17.08■□□□□ 0.33
CCDC40-201ENST00000269318 CRISPLD1Q9H336 500 aa17.08■□□□□ 0.33
CCDC40-201ENST00000269318 SSU72Q9NP77 194 aaKnown RBP17.08■□□□□ 0.33
CCDC40-201ENST00000269318 NKIRAS1Q9NYS0 192 aa17.08■□□□□ 0.33
CCDC40-201ENST00000269318 GGA2Q9UJY4 613 aa17.08■□□□□ 0.33
CCDC40-201ENST00000269318 SMG5Q9UPR3 1016 aaKnown RBP17.08■□□□□ 0.33
CCDC40-201ENST00000269318 FNDC1Q4ZHG4 1894 aaPredicted RBP17.08■□□□□ 0.32
CCDC40-201ENST00000269318 MTSS1O43312 755 aa17.08■□□□□ 0.32
CCDC40-201ENST00000269318 TYROBPO43914 113 aa17.08■□□□□ 0.32
CCDC40-201ENST00000269318 SPAG7O75391 227 aa17.08■□□□□ 0.32
CCDC40-201ENST00000269318 PARNO95453 639 aaKnown RBP17.08■□□□□ 0.32
CCDC40-201ENST00000269318 SRGAP2BP0DMP2 458 aa17.08■□□□□ 0.32
CCDC40-201ENST00000269318 WDR4P57081 412 aaKnown RBP17.08■□□□□ 0.32
CCDC40-201ENST00000269318 TAS1R1Q7RTX1 841 aa17.08■□□□□ 0.32
CCDC40-201ENST00000269318 PID1Q7Z2X4 250 aa17.08■□□□□ 0.32
CCDC40-201ENST00000269318 CPLX4Q7Z7G2 160 aa17.08■□□□□ 0.32
CCDC40-201ENST00000269318 C4orf33Q8N1A6 199 aa17.08■□□□□ 0.32
CCDC40-201ENST00000269318 ARHGAP18Q8N392 663 aa17.08■□□□□ 0.32
CCDC40-201ENST00000269318 ZSCAN18Q8TBC5 510 aaPredicted RBP17.08■□□□□ 0.32
CCDC40-201ENST00000269318 DEPDC1BQ8WUY9 529 aa17.08■□□□□ 0.32
CCDC40-201ENST00000269318 DYDC1Q8WWB3 177 aa17.08■□□□□ 0.32
CCDC40-201ENST00000269318 SLC39A13Q96H72 371 aa17.08■□□□□ 0.32
CCDC40-201ENST00000269318 FCRL2Q96LA5 508 aaPredicted RBP17.08■□□□□ 0.32
CCDC40-201ENST00000269318 TRIM56Q9BRZ2 755 aaKnown RBP17.08■□□□□ 0.32
CCDC40-201ENST00000269318 PPP1R12CQ9BZL4 782 aa17.08■□□□□ 0.32
CCDC40-201ENST00000269318 GMIPQ9P107 970 aa17.08■□□□□ 0.32
CCDC40-201ENST00000269318 KLHL8Q9P2G9 620 aaPredicted RBP17.08■□□□□ 0.32
CCDC40-201ENST00000269318 EFEMP2O95967 443 aa17.07■□□□□ 0.32
CCDC40-201ENST00000269318 APOEP02649 317 aa17.07■□□□□ 0.32
CCDC40-201ENST00000269318 NRG1Q02297 640 aaPredicted RBP17.07■□□□□ 0.32
CCDC40-201ENST00000269318 RNF19BQ6ZMZ0 732 aa17.07■□□□□ 0.32
CCDC40-201ENST00000269318 SPATS2Q86XZ4 545 aaKnown RBP17.07■□□□□ 0.32
CCDC40-201ENST00000269318 LRRC43Q8N309 656 aa17.07■□□□□ 0.32
CCDC40-201ENST00000269318 SPPL2BQ8TCT7 592 aa17.07■□□□□ 0.32
CCDC40-201ENST00000269318 TMEM51Q9NW97 253 aa17.07■□□□□ 0.32
CCDC40-201ENST00000269318 TLR6Q9Y2C9 796 aa17.07■□□□□ 0.32
CCDC40-201ENST00000269318 PCDHA11Q9Y5I1 949 aa17.07■□□□□ 0.32
CCDC40-201ENST00000269318 SOAT2O75908 522 aa17.06■□□□□ 0.32
CCDC40-201ENST00000269318 ASMTLO95671 621 aa17.06■□□□□ 0.32
CCDC40-201ENST00000269318 CPB1P15086 417 aa17.06■□□□□ 0.32
CCDC40-201ENST00000269318 KRT4P19013 534 aa17.06■□□□□ 0.32
CCDC40-201ENST00000269318 CD68P34810 354 aaPredicted RBP17.06■□□□□ 0.32
CCDC40-201ENST00000269318 ARPP19P56211 112 aa17.06■□□□□ 0.32
CCDC40-201ENST00000269318 TLE2Q04725 743 aa17.06■□□□□ 0.32
CCDC40-201ENST00000269318 ZNF33AQ06730 810 aa17.06■□□□□ 0.32
CCDC40-201ENST00000269318 SMARCB1Q12824 385 aa17.06■□□□□ 0.32
CCDC40-201ENST00000269318 ZBTB17Q13105 803 aa17.06■□□□□ 0.32
CCDC40-201ENST00000269318 STEAP4Q687X5 459 aa17.06■□□□□ 0.32
CCDC40-201ENST00000269318 RWDD4Q6NW29 188 aaKnown RBP17.06■□□□□ 0.32
CCDC40-201ENST00000269318 ARHGAP12Q8IWW6 846 aa17.06■□□□□ 0.32
CCDC40-201ENST00000269318 GSDMBQ8TAX9 411 aa17.06■□□□□ 0.32
CCDC40-201ENST00000269318 GDAP1Q8TB36 358 aa17.06■□□□□ 0.32
CCDC40-201ENST00000269318 GPR152Q8TDT2 470 aa17.06■□□□□ 0.32
CCDC40-201ENST00000269318 CELF6Q96J87 481 aaKnown RBP17.06■□□□□ 0.32
CCDC40-201ENST00000269318 SEC16BQ96JE7 1060 aa17.06■□□□□ 0.32
CCDC40-201ENST00000269318 SPATA17Q96L03 361 aa17.06■□□□□ 0.32
CCDC40-201ENST00000269318 TOX2Q96NM4 488 aa17.06■□□□□ 0.32
CCDC40-201ENST00000269318 SMYD2Q9NRG4 433 aa17.06■□□□□ 0.32
CCDC40-201ENST00000269318 SLC27A5Q9Y2P5 690 aa17.06■□□□□ 0.32
CCDC40-201ENST00000269318 HS3ST4Q9Y661 456 aa17.06■□□□□ 0.32
CCDC40-201ENST00000269318 MAD1L1Q9Y6D9 718 aa17.06■□□□□ 0.32
CCDC40-201ENST00000269318 CXorf49A8MYA2 514 aaPredicted RBP17.06■□□□□ 0.32
CCDC40-201ENST00000269318 H7C4K7 107 aa17.06■□□□□ 0.32
CCDC40-201ENST00000269318 FGF10O15520 208 aaPredicted RBP17.06■□□□□ 0.32
CCDC40-201ENST00000269318 ZBTB24O43167 697 aaPredicted RBP17.06■□□□□ 0.32
CCDC40-201ENST00000269318 HAPLN1P10915 354 aaPredicted RBP17.06■□□□□ 0.32
CCDC40-201ENST00000269318 YWHAQP27348 245 aa17.06■□□□□ 0.32
CCDC40-201ENST00000269318 TRIM60Q495X7 471 aa17.06■□□□□ 0.32
CCDC40-201ENST00000269318 TEX44Q53QW1 395 aa17.06■□□□□ 0.32
CCDC40-201ENST00000269318 GKAP1Q5VSY0 366 aaPredicted RBP17.06■□□□□ 0.32
CCDC40-201ENST00000269318 C6orf89Q6UWU4 347 aa17.06■□□□□ 0.32
CCDC40-201ENST00000269318 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.06■□□□□ 0.32
CCDC40-201ENST00000269318 ANKS3Q6ZW76 656 aa17.06■□□□□ 0.32
CCDC40-201ENST00000269318 DEFB128Q7Z7B8 93 aa17.06■□□□□ 0.32
CCDC40-201ENST00000269318 SRLQ86TD4 932 aa17.06■□□□□ 0.32
CCDC40-201ENST00000269318 SLC26A11Q86WA9 606 aa17.06■□□□□ 0.32
CCDC40-201ENST00000269318 ARNTL2Q8WYA1 636 aa17.06■□□□□ 0.32
CCDC40-201ENST00000269318 TBC1D31Q96DN5 1066 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms