RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 OSBPL6Q9BZF3 934 aa13.17□□□□□ -0.3
SS18-202ENST00000269138 LACRTQ9GZZ8 138 aa13.17□□□□□ -0.3
SS18-202ENST00000269138 MPP6Q9NZW5 540 aa13.17□□□□□ -0.3
SS18-202ENST00000269138 SALL4Q9UJQ4 1053 aa13.17□□□□□ -0.3
SS18-202ENST00000269138 USP18Q9UMW8 372 aa13.17□□□□□ -0.3
SS18-202ENST00000269138 DUSP10Q9Y6W6 482 aa13.17□□□□□ -0.3
SS18-202ENST00000269138 IGLV3-10A0A075B6K4 115 aa13.16□□□□□ -0.3
SS18-202ENST00000269138 A0A0A0MRY4 1105 aa13.16□□□□□ -0.3
SS18-202ENST00000269138 TBC1D3BA6NDS4 549 aa13.16□□□□□ -0.3
SS18-202ENST00000269138 DRGXA6NNA5 263 aa13.16□□□□□ -0.3
SS18-202ENST00000269138 PRRT4C9JH25 899 aa13.16□□□□□ -0.3
SS18-202ENST00000269138 PRPSAP2O60256 369 aa13.16□□□□□ -0.3
SS18-202ENST00000269138 PROSCO94903 275 aa13.16□□□□□ -0.3
SS18-202ENST00000269138 LUC7L3O95232 432 aaKnown RBP13.16□□□□□ -0.3
SS18-202ENST00000269138 HLA-FP30511 346 aa13.16□□□□□ -0.3
SS18-202ENST00000269138 AVPR2P30518 371 aa13.16□□□□□ -0.3
SS18-202ENST00000269138 CD70P32970 193 aa13.16□□□□□ -0.3
SS18-202ENST00000269138 PCK1P35558 622 aa13.16□□□□□ -0.3
SS18-202ENST00000269138 SEC13P55735 322 aa13.16□□□□□ -0.3
SS18-202ENST00000269138 CCZ1BP86790 482 aa13.16□□□□□ -0.3
SS18-202ENST00000269138 CCZ1P86791 482 aaPredicted RBP13.16□□□□□ -0.3
SS18-202ENST00000269138 GAS6Q14393 721 aa13.16□□□□□ -0.3
SS18-202ENST00000269138 ACAP1Q15027 740 aa13.16□□□□□ -0.3
SS18-202ENST00000269138 TCEAL1Q15170 157 aa13.16□□□□□ -0.3
SS18-202ENST00000269138 EFHC2Q5JST6 749 aa13.16□□□□□ -0.3
SS18-202ENST00000269138 DGKKQ5KSL6 1271 aa13.16□□□□□ -0.3
SS18-202ENST00000269138 MANEALQ5VSG8 457 aa13.16□□□□□ -0.3
SS18-202ENST00000269138 PKN3Q6P5Z2 889 aa13.16□□□□□ -0.3
SS18-202ENST00000269138 LRRC31Q6UY01 552 aa13.16□□□□□ -0.3
SS18-202ENST00000269138 MFN1Q8IWA4 741 aa13.16□□□□□ -0.3
SS18-202ENST00000269138 CCAR2Q8N163 923 aaKnown RBP13.16□□□□□ -0.3
SS18-202ENST00000269138 TERB1Q8NA31 727 aa13.16□□□□□ -0.3
SS18-202ENST00000269138 FIBINQ8TAL6 211 aa13.16□□□□□ -0.3
SS18-202ENST00000269138 EXOC4Q96A65 974 aa13.16□□□□□ -0.3
SS18-202ENST00000269138 SNRNP25Q9BV90 132 aaKnown RBP13.16□□□□□ -0.3
SS18-202ENST00000269138 SLC2A11Q9BYW1 496 aa13.16□□□□□ -0.3
SS18-202ENST00000269138 ZWILCHQ9H900 591 aa13.16□□□□□ -0.3
SS18-202ENST00000269138 ZDHHC4Q9NPG8 344 aa13.16□□□□□ -0.3
SS18-202ENST00000269138 ABCB8Q9NUT2 735 aa13.16□□□□□ -0.3
SS18-202ENST00000269138 HCN2Q9UL51 889 aa13.16□□□□□ -0.3
SS18-202ENST00000269138 SLC27A6Q9Y2P4 619 aa13.16□□□□□ -0.3
SS18-202ENST00000269138 TYW5A2RUC4 315 aaKnown RBP13.15□□□□□ -0.3
SS18-202ENST00000269138 NCAM2O15394 837 aa13.15□□□□□ -0.3
SS18-202ENST00000269138 RNF40O75150 1001 aa13.15□□□□□ -0.3
SS18-202ENST00000269138 LRIG2O94898 1065 aa13.15□□□□□ -0.3
SS18-202ENST00000269138 IPO7O95373 1038 aaKnown RBP13.15□□□□□ -0.3
SS18-202ENST00000269138 CHRM1P11229 460 aaPredicted RBP13.15□□□□□ -0.3
SS18-202ENST00000269138 SSR1P43307 286 aaKnown RBP13.15□□□□□ -0.3
SS18-202ENST00000269138 NOP2P46087 812 aaKnown RBP13.15□□□□□ -0.3
SS18-202ENST00000269138 NUMBP49757 651 aa13.15□□□□□ -0.3
SS18-202ENST00000269138 VAV2P52735 878 aa13.15□□□□□ -0.3
SS18-202ENST00000269138 TAS2R40P59535 323 aa13.15□□□□□ -0.3
SS18-202ENST00000269138 NRG1Q02297 640 aaPredicted RBP13.15□□□□□ -0.3
SS18-202ENST00000269138 LMAN2Q12907 356 aa13.15□□□□□ -0.3
SS18-202ENST00000269138 LRRC32Q14392 662 aa13.15□□□□□ -0.3
SS18-202ENST00000269138 SMTNL2Q2TAL5 461 aa13.15□□□□□ -0.3
SS18-202ENST00000269138 KCNT1Q5JUK3 1230 aa13.15□□□□□ -0.3
SS18-202ENST00000269138 ERMARDQ5T6L9 678 aa13.15□□□□□ -0.3
SS18-202ENST00000269138 TMEM215Q68D42 235 aa13.15□□□□□ -0.3
SS18-202ENST00000269138 SUGP1Q8IWZ8 645 aaKnown RBP13.15□□□□□ -0.3
SS18-202ENST00000269138 OR52K2Q8NGK3 314 aa13.15□□□□□ -0.3
SS18-202ENST00000269138 PDLIM2Q96JY6 352 aa13.15□□□□□ -0.3
SS18-202ENST00000269138 KCTD15Q96SI1 283 aaPredicted RBP13.15□□□□□ -0.3
SS18-202ENST00000269138 DHX35Q9H5Z1 703 aaKnown RBP13.15□□□□□ -0.3
SS18-202ENST00000269138 LUC7LQ9NQ29 371 aaKnown RBP13.15□□□□□ -0.3
SS18-202ENST00000269138 POLR3BQ9NW08 1133 aaPredicted RBP13.15□□□□□ -0.3
SS18-202ENST00000269138 C2orf42Q9NWW7 574 aa13.15□□□□□ -0.3
SS18-202ENST00000269138 AP4E1Q9UPM8 1137 aa13.15□□□□□ -0.3
SS18-202ENST00000269138 NEU3Q9UQ49 428 aa13.15□□□□□ -0.3
SS18-202ENST00000269138 HYOU1Q9Y4L1 999 aa13.15□□□□□ -0.3
SS18-202ENST00000269138 ZDBF2Q9HCK1 2354 aa13.15□□□□□ -0.3
SS18-202ENST00000269138 A0A1B0GVM2 712 aa13.14□□□□□ -0.31
SS18-202ENST00000269138 TCAF2A6NFQ2 919 aa13.14□□□□□ -0.31
SS18-202ENST00000269138 H0Y626 953 aa13.14□□□□□ -0.31
SS18-202ENST00000269138 CREB3O43889 395 aa13.14□□□□□ -0.31
SS18-202ENST00000269138 PABPC1P11940 636 aaKnown RBP13.14□□□□□ -0.31
SS18-202ENST00000269138 L1CAMP32004 1257 aa13.14□□□□□ -0.31
SS18-202ENST00000269138 TNFRSF4P43489 277 aa13.14□□□□□ -0.31
SS18-202ENST00000269138 RPS9P46781 194 aaKnown RBP13.14□□□□□ -0.31
SS18-202ENST00000269138 AIF1P55008 147 aa13.14□□□□□ -0.31
SS18-202ENST00000269138 KRT83P78385 493 aa13.14□□□□□ -0.31
SS18-202ENST00000269138 SLC25A11Q02978 314 aaKnown RBP13.14□□□□□ -0.31
SS18-202ENST00000269138 SEMA3BQ13214 749 aa13.14□□□□□ -0.31
SS18-202ENST00000269138 CDH18Q13634 790 aa13.14□□□□□ -0.31
SS18-202ENST00000269138 ATP13A4Q4VNC1 1196 aa13.14□□□□□ -0.31
SS18-202ENST00000269138 C2orf27AQ580R0 203 aa13.14□□□□□ -0.31
SS18-202ENST00000269138 TTC39BQ5VTQ0 682 aaPredicted RBP13.14□□□□□ -0.31
SS18-202ENST00000269138 CXorf57Q6NSI4 855 aaKnown RBP13.14□□□□□ -0.31
SS18-202ENST00000269138 RWDD4Q6NW29 188 aaKnown RBP13.14□□□□□ -0.31
SS18-202ENST00000269138 TFAP2DQ7Z6R9 452 aa13.14□□□□□ -0.31
SS18-202ENST00000269138 KIAA0907Q7Z7F0 614 aaPredicted RBP13.14□□□□□ -0.31
SS18-202ENST00000269138 KIAA1328Q86T90 577 aa13.14□□□□□ -0.31
SS18-202ENST00000269138 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.14□□□□□ -0.31
SS18-202ENST00000269138 CCDC112Q8NEF3 446 aa13.14□□□□□ -0.31
SS18-202ENST00000269138 SORCS1Q8WY21 1168 aa13.14□□□□□ -0.31
SS18-202ENST00000269138 ANP32BQ92688 251 aaKnown RBP13.14□□□□□ -0.31
SS18-202ENST00000269138 NCAPGQ9BPX3 1015 aa13.14□□□□□ -0.31
SS18-202ENST00000269138 CHRDQ9H2X0 955 aa13.14□□□□□ -0.31
SS18-202ENST00000269138 GOLPH3Q9H4A6 298 aa13.14□□□□□ -0.31
SS18-202ENST00000269138 ZNF212Q9UDV6 495 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms