RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 CYP1A1P04798 512 aaPredicted RBP17.1■□□□□ 0.33
PHRF1-201ENST00000264555 CHRNB2P17787 502 aa17.1■□□□□ 0.33
PHRF1-201ENST00000264555 DRD4P21917 467 aa17.1■□□□□ 0.33
PHRF1-201ENST00000264555 ZNF470Q6ECI4 717 aa17.1■□□□□ 0.33
PHRF1-201ENST00000264555 RNF217Q8TC41 542 aa17.1■□□□□ 0.33
PHRF1-201ENST00000264555 MRPL45Q9BRJ2 306 aaKnown RBP17.1■□□□□ 0.33
PHRF1-201ENST00000264555 IRAK4Q9NWZ3 460 aa17.1■□□□□ 0.33
PHRF1-201ENST00000264555 KCNK4Q9NYG8 393 aa17.1■□□□□ 0.33
PHRF1-201ENST00000264555 MORF4L1Q9UBU8 362 aa17.1■□□□□ 0.33
PHRF1-201ENST00000264555 ZNF214Q9UL59 606 aaPredicted RBP17.1■□□□□ 0.33
PHRF1-201ENST00000264555 XPO1O14980 1071 aaKnown RBP17.1■□□□□ 0.33
PHRF1-201ENST00000264555 USP12O75317 370 aa17.1■□□□□ 0.33
PHRF1-201ENST00000264555 FKBP6O75344 327 aa17.1■□□□□ 0.33
PHRF1-201ENST00000264555 CABYRO75952 493 aa17.1■□□□□ 0.33
PHRF1-201ENST00000264555 HSPA13P48723 471 aa17.1■□□□□ 0.33
PHRF1-201ENST00000264555 CPXM1Q96SM3 734 aa17.1■□□□□ 0.33
PHRF1-201ENST00000264555 CLPBQ9H078 707 aa17.1■□□□□ 0.33
PHRF1-201ENST00000264555 ITGALP20701 1170 aa17.1■□□□□ 0.33
PHRF1-201ENST00000264555 XRCC4Q13426 336 aa17.1■□□□□ 0.33
PHRF1-201ENST00000264555 C9orf57Q5W0N0 161 aa17.1■□□□□ 0.33
PHRF1-201ENST00000264555 ZNF572Q7Z3I7 529 aaPredicted RBP17.1■□□□□ 0.33
PHRF1-201ENST00000264555 XYLT1Q86Y38 959 aa17.1■□□□□ 0.33
PHRF1-201ENST00000264555 TNIP2Q8NFZ5 429 aa17.1■□□□□ 0.33
PHRF1-201ENST00000264555 TEKT4Q8WW24 435 aa17.1■□□□□ 0.33
PHRF1-201ENST00000264555 JADE3Q92613 823 aa17.1■□□□□ 0.33
PHRF1-201ENST00000264555 MRPL9Q9BYD2 267 aaKnown RBP17.1■□□□□ 0.33
PHRF1-201ENST00000264555 PTCH2Q9Y6C5 1203 aa17.1■□□□□ 0.33
PHRF1-201ENST00000264555 TBKBP1A7MCY6 615 aa17.1■□□□□ 0.33
PHRF1-201ENST00000264555 OCA2Q04671 838 aa17.1■□□□□ 0.33
PHRF1-201ENST00000264555 PDK4Q16654 411 aa17.1■□□□□ 0.33
PHRF1-201ENST00000264555 SGO1Q5FBB7 561 aa17.1■□□□□ 0.33
PHRF1-201ENST00000264555 HOMEZQ8IX15 550 aa17.1■□□□□ 0.33
PHRF1-201ENST00000264555 HS6ST3Q8IZP7 471 aa17.1■□□□□ 0.33
PHRF1-201ENST00000264555 R3HDM2Q9Y2K5 976 aaKnown RBP17.1■□□□□ 0.33
PHRF1-201ENST00000264555 DAB1O75553 588 aa17.09■□□□□ 0.33
PHRF1-201ENST00000264555 MRPS5P82675 430 aaKnown RBP17.09■□□□□ 0.33
PHRF1-201ENST00000264555 DUSP16Q9BY84 665 aa17.09■□□□□ 0.33
PHRF1-201ENST00000264555 FAM124BQ9H5Z6 455 aaPredicted RBP17.09■□□□□ 0.33
PHRF1-201ENST00000264555 NMRAL1Q9HBL8 299 aa17.09■□□□□ 0.33
PHRF1-201ENST00000264555 NUP188Q5SRE5 1749 aa17.09■□□□□ 0.33
PHRF1-201ENST00000264555 SOWAHBA6NEL2 793 aa17.09■□□□□ 0.33
PHRF1-201ENST00000264555 SEC24DO94855 1032 aaPredicted RBP17.09■□□□□ 0.33
PHRF1-201ENST00000264555 ERVK-10P10266 1014 aa17.09■□□□□ 0.33
PHRF1-201ENST00000264555 C12orf50Q8NA57 414 aaPredicted RBP17.09■□□□□ 0.33
PHRF1-201ENST00000264555 PPP1R13LQ8WUF5 828 aa17.09■□□□□ 0.33
PHRF1-201ENST00000264555 PDGFDQ9GZP0 370 aaPredicted RBP17.09■□□□□ 0.33
PHRF1-201ENST00000264555 RPTORQ8N122 1335 aa17.09■□□□□ 0.33
PHRF1-201ENST00000264555 MMP3P08254 477 aa17.09■□□□□ 0.33
PHRF1-201ENST00000264555 GOT1P17174 413 aa17.09■□□□□ 0.33
PHRF1-201ENST00000264555 MYO1HQ8N1T3 1032 aa17.09■□□□□ 0.33
PHRF1-201ENST00000264555 ZNF555Q8NEP9 628 aa17.09■□□□□ 0.33
PHRF1-201ENST00000264555 OR52K1Q8NGK4 314 aa17.09■□□□□ 0.33
PHRF1-201ENST00000264555 DDI1Q8WTU0 396 aa17.09■□□□□ 0.33
PHRF1-201ENST00000264555 RBBP8Q99708 897 aa17.09■□□□□ 0.33
PHRF1-201ENST00000264555 EBNA1BP2Q99848 306 aaKnown RBP17.09■□□□□ 0.33
PHRF1-201ENST00000264555 C17orf80Q9BSJ5 609 aa17.09■□□□□ 0.33
PHRF1-201ENST00000264555 RNPEPQ9H4A4 650 aa17.09■□□□□ 0.33
PHRF1-201ENST00000264555 TRIM45Q9H8W5 580 aaPredicted RBP17.09■□□□□ 0.33
PHRF1-201ENST00000264555 EIF3LQ9Y262 564 aaKnown RBP17.09■□□□□ 0.33
PHRF1-201ENST00000264555 TCRBV7S2A1N4TA0A589 114 aa17.09■□□□□ 0.33
PHRF1-201ENST00000264555 TFE3P19532 575 aaPredicted RBP17.09■□□□□ 0.33
PHRF1-201ENST00000264555 INPP1P49441 399 aa17.09■□□□□ 0.33
PHRF1-201ENST00000264555 RNF43Q68DV7 783 aa17.09■□□□□ 0.33
PHRF1-201ENST00000264555 CLEC4FQ8N1N0 589 aa17.09■□□□□ 0.33
PHRF1-201ENST00000264555 DTNAQ9Y4J8 743 aa17.09■□□□□ 0.33
PHRF1-201ENST00000264555 BANF1O75531 89 aa17.08■□□□□ 0.33
PHRF1-201ENST00000264555 NOL9Q5SY16 702 aaKnown RBP17.08■□□□□ 0.33
PHRF1-201ENST00000264555 PHACTR1Q9C0D0 580 aa17.08■□□□□ 0.33
PHRF1-201ENST00000264555 PCDH18Q9HCL0 1135 aa17.08■□□□□ 0.33
PHRF1-201ENST00000264555 NCF1BA6NI72 391 aaPredicted RBP17.08■□□□□ 0.33
PHRF1-201ENST00000264555 NCF1CA8MVU1 366 aaPredicted RBP17.08■□□□□ 0.33
PHRF1-201ENST00000264555 TPP1O14773 563 aa17.08■□□□□ 0.33
PHRF1-201ENST00000264555 NCF1P14598 390 aaPredicted RBP17.08■□□□□ 0.33
PHRF1-201ENST00000264555 DARSP14868 501 aaKnown RBP17.08■□□□□ 0.33
PHRF1-201ENST00000264555 KPNB1Q14974 876 aaKnown RBP17.08■□□□□ 0.33
PHRF1-201ENST00000264555 PCID2Q5JVF3 399 aa17.08■□□□□ 0.33
PHRF1-201ENST00000264555 INPP5DQ92835 1189 aa17.08■□□□□ 0.33
PHRF1-201ENST00000264555 TMEM237Q96Q45 408 aa17.08■□□□□ 0.33
PHRF1-201ENST00000264555 NXF3Q9H4D5 531 aaKnown RBP17.08■□□□□ 0.33
PHRF1-201ENST00000264555 PRDM12Q9H4Q4 367 aa17.08■□□□□ 0.33
PHRF1-201ENST00000264555 ST3GAL5Q9UNP4 418 aa17.08■□□□□ 0.33
PHRF1-201ENST00000264555 GIT1Q9Y2X7 761 aa17.08■□□□□ 0.33
PHRF1-201ENST00000264555 UBDO15205 165 aa17.08■□□□□ 0.32
PHRF1-201ENST00000264555 C1orf127Q8N9H9 656 aa17.08■□□□□ 0.32
PHRF1-201ENST00000264555 FAM136AQ96C01 138 aa17.08■□□□□ 0.32
PHRF1-201ENST00000264555 PDZD7Q9H5P4 517 aa17.08■□□□□ 0.32
PHRF1-201ENST00000264555 SLC4A7Q9Y6M7 1214 aa17.08■□□□□ 0.32
PHRF1-201ENST00000264555 ONECUT3O60422 494 aaPredicted RBP17.08■□□□□ 0.32
PHRF1-201ENST00000264555 MFSD5Q6N075 450 aa17.08■□□□□ 0.32
PHRF1-201ENST00000264555 SIAH1Q8IUQ4 282 aa17.08■□□□□ 0.32
PHRF1-201ENST00000264555 FUKQ8N0W3 1084 aa17.08■□□□□ 0.32
PHRF1-201ENST00000264555 KYQ8NBH2 561 aa17.08■□□□□ 0.32
PHRF1-201ENST00000264555 CNDP1Q96KN2 507 aa17.08■□□□□ 0.32
PHRF1-201ENST00000264555 UBTFL6P0CB48 400 aaPredicted RBP17.07■□□□□ 0.32
PHRF1-201ENST00000264555 CACHD1Q5VU97 1274 aa17.07■□□□□ 0.32
PHRF1-201ENST00000264555 ZCCHC23Q6ZST2 131 aa17.07■□□□□ 0.32
PHRF1-201ENST00000264555 PPP2R3CQ969Q6 453 aa17.07■□□□□ 0.32
PHRF1-201ENST00000264555 ZBTB10Q96DT7 871 aa17.07■□□□□ 0.32
PHRF1-201ENST00000264555 ANKRD27Q96NW4 1050 aa17.07■□□□□ 0.32
PHRF1-201ENST00000264555 MAGEA13PA6NCF6 341 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms