RNA–Protein interactions for RNA: ENST00000262554.6

SPTLC1-201, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC1, Length 1,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-201ENST00000262554 KLHL8Q9P2G9 620 aaPredicted RBP13.29□□□□□ -0.28
SPTLC1-201ENST00000262554 SLC17A7Q9P2U7 560 aa13.29□□□□□ -0.28
SPTLC1-201ENST00000262554 MYO16Q9Y6X6 1858 aa13.29□□□□□ -0.28
SPTLC1-201ENST00000262554 F8W810 466 aa13.29□□□□□ -0.28
SPTLC1-201ENST00000262554 COPEO14579 308 aa13.29□□□□□ -0.28
SPTLC1-201ENST00000262554 DNAJC8O75937 253 aaPredicted RBP13.29□□□□□ -0.28
SPTLC1-201ENST00000262554 PTPN3P26045 913 aa13.29□□□□□ -0.28
SPTLC1-201ENST00000262554 EPHB2P29323 1055 aa13.29□□□□□ -0.28
SPTLC1-201ENST00000262554 SESN2P58004 480 aaPredicted RBP13.29□□□□□ -0.28
SPTLC1-201ENST00000262554 NOMO2Q5JPE7 1267 aa13.29□□□□□ -0.28
SPTLC1-201ENST00000262554 BTBD8Q5XKL5 378 aa13.29□□□□□ -0.28
SPTLC1-201ENST00000262554 TRMT10BQ6PF06 316 aaKnown RBP13.29□□□□□ -0.28
SPTLC1-201ENST00000262554 SH2D5Q6ZV89 423 aa13.29□□□□□ -0.28
SPTLC1-201ENST00000262554 RTN4RL1Q86UN2 441 aaPredicted RBP13.29□□□□□ -0.28
SPTLC1-201ENST00000262554 TP53INP2Q8IXH6 220 aa13.29□□□□□ -0.28
SPTLC1-201ENST00000262554 CNPY4Q8N129 248 aa13.29□□□□□ -0.28
SPTLC1-201ENST00000262554 HDAC11Q96DB2 347 aa13.29□□□□□ -0.28
SPTLC1-201ENST00000262554 SMYD2Q9NRG4 433 aa13.29□□□□□ -0.28
SPTLC1-201ENST00000262554 ABCC13Q9NSE7 274 aa13.29□□□□□ -0.28
SPTLC1-201ENST00000262554 MOCS1Q9NZB8 636 aa13.29□□□□□ -0.28
SPTLC1-201ENST00000262554 KANSL3Q9P2N6 904 aa13.29□□□□□ -0.28
SPTLC1-201ENST00000262554 SLC12A4Q9UP95 1085 aa13.29□□□□□ -0.28
SPTLC1-201ENST00000262554 DNAH12Q6ZR08 3092 aa13.29□□□□□ -0.28
SPTLC1-201ENST00000262554 SHROOM3Q8TF72 1996 aa13.28□□□□□ -0.28
SPTLC1-201ENST00000262554 KCNK1O00180 336 aa13.28□□□□□ -0.28
SPTLC1-201ENST00000262554 ALDH1A2O94788 518 aa13.28□□□□□ -0.28
SPTLC1-201ENST00000262554 LRIG2O94898 1065 aa13.28□□□□□ -0.28
SPTLC1-201ENST00000262554 CSH1P0DML2 217 aa13.28□□□□□ -0.28
SPTLC1-201ENST00000262554 CSH2P0DML3 217 aa13.28□□□□□ -0.28
SPTLC1-201ENST00000262554 PGAM1P18669 254 aa13.28□□□□□ -0.28
SPTLC1-201ENST00000262554 CNTFP26441 200 aa13.28□□□□□ -0.28
SPTLC1-201ENST00000262554 SLC5A3P53794 718 aa13.28□□□□□ -0.28
SPTLC1-201ENST00000262554 DSC1Q08554 894 aa13.28□□□□□ -0.28
SPTLC1-201ENST00000262554 GALNT2Q10471 571 aa13.28□□□□□ -0.28
SPTLC1-201ENST00000262554 FAM133BQ5BKY9 247 aaKnown RBP13.28□□□□□ -0.28
SPTLC1-201ENST00000262554 CLLU1OSQ5K130 101 aa13.28□□□□□ -0.28
SPTLC1-201ENST00000262554 ZNF280BQ86YH2 543 aa13.28□□□□□ -0.28
SPTLC1-201ENST00000262554 DCP1BQ8IZD4 617 aaKnown RBP13.28□□□□□ -0.28
SPTLC1-201ENST00000262554 NPWQ8N729 165 aa13.28□□□□□ -0.28
SPTLC1-201ENST00000262554 CD99L2Q8TCZ2 262 aa13.28□□□□□ -0.28
SPTLC1-201ENST00000262554 TRIM56Q9BRZ2 755 aaKnown RBP13.28□□□□□ -0.28
SPTLC1-201ENST00000262554 OSBPL2Q9H1P3 480 aa13.28□□□□□ -0.28
SPTLC1-201ENST00000262554 RXFP1Q9HBX9 757 aa13.28□□□□□ -0.28
SPTLC1-201ENST00000262554 SLCO1B3Q9NPD5 702 aa13.28□□□□□ -0.28
SPTLC1-201ENST00000262554 TRHDEQ9UKU6 1024 aa13.28□□□□□ -0.28
SPTLC1-201ENST00000262554 SNX10Q9Y5X0 201 aa13.28□□□□□ -0.28
SPTLC1-201ENST00000262554 WDR91A4D1P6 747 aa13.27□□□□□ -0.28
SPTLC1-201ENST00000262554 TMEM189-UBE2V1I3L0A0 370 aa13.27□□□□□ -0.28
SPTLC1-201ENST00000262554 DDHD2O94830 711 aa13.27□□□□□ -0.28
SPTLC1-201ENST00000262554 UBOX5O94941 541 aa13.27□□□□□ -0.28
SPTLC1-201ENST00000262554 IGLV3-25P01717 112 aa13.27□□□□□ -0.28
SPTLC1-201ENST00000262554 MGAT1P26572 445 aa13.27□□□□□ -0.28
SPTLC1-201ENST00000262554 GARSP41250 739 aaKnown RBP13.27□□□□□ -0.28
SPTLC1-201ENST00000262554 FAM189BP81408 668 aa13.27□□□□□ -0.28
SPTLC1-201ENST00000262554 COG7P83436 770 aa13.27□□□□□ -0.28
SPTLC1-201ENST00000262554 BRMS1LQ5PSV4 323 aa13.27□□□□□ -0.28
SPTLC1-201ENST00000262554 FYB2Q5VWT5 728 aa13.27□□□□□ -0.28
SPTLC1-201ENST00000262554 ITPRIPL1Q6GPH6 555 aa13.27□□□□□ -0.28
SPTLC1-201ENST00000262554 TRAF7Q6Q0C0 670 aa13.27□□□□□ -0.28
SPTLC1-201ENST00000262554 PACS2Q86VP3 889 aa13.27□□□□□ -0.28
SPTLC1-201ENST00000262554 COLGALT2Q8IYK4 626 aa13.27□□□□□ -0.28
SPTLC1-201ENST00000262554 PXYLP1Q8TE99 480 aa13.27□□□□□ -0.28
SPTLC1-201ENST00000262554 CDKL2Q92772 493 aa13.27□□□□□ -0.28
SPTLC1-201ENST00000262554 TTC17Q96AE7 1141 aa13.27□□□□□ -0.28
SPTLC1-201ENST00000262554 FAM193BQ96PV7 902 aaPredicted RBP13.27□□□□□ -0.28
SPTLC1-201ENST00000262554 FAM111AQ96PZ2 611 aa13.27□□□□□ -0.28
SPTLC1-201ENST00000262554 VAT1Q99536 393 aa13.27□□□□□ -0.28
SPTLC1-201ENST00000262554 MANSC1Q9H8J5 431 aa13.27□□□□□ -0.28
SPTLC1-201ENST00000262554 GPBP1L1Q9HC44 474 aaPredicted RBP13.27□□□□□ -0.28
SPTLC1-201ENST00000262554 GGT7Q9UJ14 662 aa13.27□□□□□ -0.28
SPTLC1-201ENST00000262554 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.27□□□□□ -0.29
SPTLC1-201ENST00000262554 A0A1W2PQ45 241 aaPredicted RBP13.27□□□□□ -0.29
SPTLC1-201ENST00000262554 A0A1W2PQY0 241 aa13.27□□□□□ -0.29
SPTLC1-201ENST00000262554 ERI2A8K979 691 aaKnown RBP13.27□□□□□ -0.29
SPTLC1-201ENST00000262554 IRAK2O43187 625 aa13.27□□□□□ -0.29
SPTLC1-201ENST00000262554 UGT1A9O60656 530 aa13.27□□□□□ -0.29
SPTLC1-201ENST00000262554 OAZ2O95190 189 aa13.27□□□□□ -0.29
SPTLC1-201ENST00000262554 DHRS4L1P0CG22 281 aa13.27□□□□□ -0.29
SPTLC1-201ENST00000262554 NEFHP12036 1026 aa13.27□□□□□ -0.29
SPTLC1-201ENST00000262554 ALDH3A1P30838 453 aa13.27□□□□□ -0.29
SPTLC1-201ENST00000262554 OR1G1P47890 313 aa13.27□□□□□ -0.29
SPTLC1-201ENST00000262554 CRADDP78560 199 aa13.27□□□□□ -0.29
SPTLC1-201ENST00000262554 CCDC15Q0P6D6 951 aa13.27□□□□□ -0.29
SPTLC1-201ENST00000262554 NAB1Q13506 487 aa13.27□□□□□ -0.29
SPTLC1-201ENST00000262554 MBTPS1Q14703 1052 aa13.27□□□□□ -0.29
SPTLC1-201ENST00000262554 SLC39A12Q504Y0 691 aa13.27□□□□□ -0.29
SPTLC1-201ENST00000262554 FBXW10Q5XX13 1052 aa13.27□□□□□ -0.29
SPTLC1-201ENST00000262554 RWDD4Q6NW29 188 aaKnown RBP13.27□□□□□ -0.29
SPTLC1-201ENST00000262554 MARK2Q7KZI7 788 aaKnown RBP13.27□□□□□ -0.29
SPTLC1-201ENST00000262554 CHSY1Q86X52 802 aa13.27□□□□□ -0.29
SPTLC1-201ENST00000262554 SCN4BQ8IWT1 228 aa13.27□□□□□ -0.29
SPTLC1-201ENST00000262554 OXNAD1Q96HP4 312 aaPredicted RBP13.27□□□□□ -0.29
SPTLC1-201ENST00000262554 CAPNS2Q96L46 248 aa13.27□□□□□ -0.29
SPTLC1-201ENST00000262554 HAPLN3Q96S86 360 aa13.27□□□□□ -0.29
SPTLC1-201ENST00000262554 SRPK1Q96SB4 655 aaKnown RBP13.27□□□□□ -0.29
SPTLC1-201ENST00000262554 FTHL17Q9BXU8 183 aa13.27□□□□□ -0.29
SPTLC1-201ENST00000262554 GBA3Q9H227 469 aa13.27□□□□□ -0.29
SPTLC1-201ENST00000262554 C12orf65Q9H3J6 166 aaKnown RBP13.27□□□□□ -0.29
SPTLC1-201ENST00000262554 UGT1A7Q9HAW7 530 aa13.27□□□□□ -0.29
SPTLC1-201ENST00000262554 UGT1A10Q9HAW8 530 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms