RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 VPS72Q15906 364 aa10.35□□□□□ -0.75
PALB2-201ENST00000261584 SPDYE2Q495Y8 402 aa10.35□□□□□ -0.75
PALB2-201ENST00000261584 CRY2Q49AN0 593 aa10.35□□□□□ -0.75
PALB2-201ENST00000261584 SLC9B1Q4ZJI4 515 aa10.35□□□□□ -0.75
PALB2-201ENST00000261584 CHST15Q7LFX5 561 aaPredicted RBP10.35□□□□□ -0.75
PALB2-201ENST00000261584 SLC41A1Q8IVJ1 513 aa10.35□□□□□ -0.75
PALB2-201ENST00000261584 BRSK2Q8IWQ3 736 aa10.35□□□□□ -0.75
PALB2-201ENST00000261584 DEFB106AQ8N104 65 aa10.35□□□□□ -0.75
PALB2-201ENST00000261584 NAT8LQ8N9F0 302 aa10.35□□□□□ -0.75
PALB2-201ENST00000261584 SLC2A14Q8TDB8 520 aa10.35□□□□□ -0.75
PALB2-201ENST00000261584 DENND1AQ8TEH3 1009 aa10.35□□□□□ -0.75
PALB2-201ENST00000261584 NCLNQ969V3 563 aa10.35□□□□□ -0.75
PALB2-201ENST00000261584 DCUN1D1Q96GG9 259 aa10.35□□□□□ -0.75
PALB2-201ENST00000261584 HBEGFQ99075 208 aa10.35□□□□□ -0.75
PALB2-201ENST00000261584 NACA2Q9H009 215 aa10.35□□□□□ -0.75
PALB2-201ENST00000261584 WDR41Q9HAD4 459 aa10.35□□□□□ -0.75
PALB2-201ENST00000261584 GNEQ9Y223 722 aaKnown RBP10.35□□□□□ -0.75
PALB2-201ENST00000261584 TTC36A6NLP5 189 aa10.35□□□□□ -0.75
PALB2-201ENST00000261584 HUS1O60921 280 aa10.35□□□□□ -0.75
PALB2-201ENST00000261584 ENDOD1O94919 500 aa10.35□□□□□ -0.75
PALB2-201ENST00000261584 RTN3O95197 1032 aaPredicted RBP10.35□□□□□ -0.75
PALB2-201ENST00000261584 FAM58BPP0C7Q3 252 aa10.35□□□□□ -0.75
PALB2-201ENST00000261584 MMP14P50281 582 aa10.35□□□□□ -0.75
PALB2-201ENST00000261584 MAP3K7CLP57077 242 aa10.35□□□□□ -0.75
PALB2-201ENST00000261584 ABCE1P61221 599 aaKnown RBP10.35□□□□□ -0.75
PALB2-201ENST00000261584 PPP1R8Q12972 351 aaKnown RBP10.35□□□□□ -0.75
PALB2-201ENST00000261584 PRKD1Q15139 912 aaPredicted RBP10.35□□□□□ -0.75
PALB2-201ENST00000261584 FAM219BQ5XKK7 198 aa10.35□□□□□ -0.75
PALB2-201ENST00000261584 PMF1Q6P1K2 205 aa10.35□□□□□ -0.75
PALB2-201ENST00000261584 TMC7Q7Z402 723 aa10.35□□□□□ -0.75
PALB2-201ENST00000261584 NET1Q7Z628 596 aaPredicted RBP10.35□□□□□ -0.75
PALB2-201ENST00000261584 TP53INP2Q8IXH6 220 aa10.35□□□□□ -0.75
PALB2-201ENST00000261584 OFCC1Q8IZS5 231 aa10.35□□□□□ -0.75
PALB2-201ENST00000261584 HSPBAP1Q96EW2 488 aa10.35□□□□□ -0.75
PALB2-201ENST00000261584 C20orf27Q9GZN8 174 aa10.35□□□□□ -0.75
PALB2-201ENST00000261584 OCEL1Q9H607 264 aa10.35□□□□□ -0.75
PALB2-201ENST00000261584 ARHGEF38Q9NXL2 777 aa10.35□□□□□ -0.75
PALB2-201ENST00000261584 ADAMTS6Q9UKP5 1117 aa10.35□□□□□ -0.75
PALB2-201ENST00000261584 DRG1Q9Y295 367 aaKnown RBP10.35□□□□□ -0.75
PALB2-201ENST00000261584 H3BSA7 217 aa10.34□□□□□ -0.75
PALB2-201ENST00000261584 E2F6O75461 281 aa10.34□□□□□ -0.75
PALB2-201ENST00000261584 ARSAP15289 507 aa10.34□□□□□ -0.75
PALB2-201ENST00000261584 DPEP1P16444 411 aa10.34□□□□□ -0.75
PALB2-201ENST00000261584 XRCC1P18887 633 aaPredicted RBP10.34□□□□□ -0.75
PALB2-201ENST00000261584 UBA1P22314 1058 aaKnown RBP10.34□□□□□ -0.75
PALB2-201ENST00000261584 CES1P23141 567 aa10.34□□□□□ -0.75
PALB2-201ENST00000261584 GRIA3P42263 894 aa10.34□□□□□ -0.75
PALB2-201ENST00000261584 CCDC15Q0P6D6 951 aa10.34□□□□□ -0.75
PALB2-201ENST00000261584 FAM83EQ2M2I3 478 aa10.34□□□□□ -0.75
PALB2-201ENST00000261584 SLC44A4Q53GD3 710 aa10.34□□□□□ -0.75
PALB2-201ENST00000261584 CDCA2Q69YH5 1023 aaPredicted RBP10.34□□□□□ -0.75
PALB2-201ENST00000261584 CCDC81Q6ZN84 652 aa10.34□□□□□ -0.75
PALB2-201ENST00000261584 RPL10LQ96L21 214 aaKnown RBP10.34□□□□□ -0.75
PALB2-201ENST00000261584 NOL11Q9H8H0 719 aaKnown RBP10.34□□□□□ -0.75
PALB2-201ENST00000261584 CHRAC1Q9NRG0 131 aa10.34□□□□□ -0.75
PALB2-201ENST00000261584 SCHIP1Q9P0W5 487 aaPredicted RBP10.34□□□□□ -0.75
PALB2-201ENST00000261584 SLIT2O94813 1529 aa10.34□□□□□ -0.75
PALB2-201ENST00000261584 ERI2A8K979 691 aaKnown RBP10.34□□□□□ -0.75
PALB2-201ENST00000261584 PTPN7P35236 360 aa10.34□□□□□ -0.75
PALB2-201ENST00000261584 YAP1P46937 504 aaKnown RBP10.34□□□□□ -0.75
PALB2-201ENST00000261584 GMPSP49915 693 aaPredicted RBP10.34□□□□□ -0.75
PALB2-201ENST00000261584 EFNA5P52803 228 aa10.34□□□□□ -0.75
PALB2-201ENST00000261584 RBP5P82980 135 aa10.34□□□□□ -0.75
PALB2-201ENST00000261584 TMEM132BQ14DG7 1078 aa10.34□□□□□ -0.75
PALB2-201ENST00000261584 ZNF280DQ6N043 979 aa10.34□□□□□ -0.75
PALB2-201ENST00000261584 MPZL3Q6UWV2 235 aa10.34□□□□□ -0.75
PALB2-201ENST00000261584 WDR49Q8IV35 697 aa10.34□□□□□ -0.75
PALB2-201ENST00000261584 SAMD3Q8N6K7 520 aa10.34□□□□□ -0.75
PALB2-201ENST00000261584 PCDH19Q8TAB3 1148 aa10.34□□□□□ -0.75
PALB2-201ENST00000261584 NAT14Q8WUY8 206 aa10.34□□□□□ -0.75
PALB2-201ENST00000261584 EBNA1BP2Q99848 306 aaKnown RBP10.34□□□□□ -0.75
PALB2-201ENST00000261584 SPATA16Q9BXB7 569 aa10.34□□□□□ -0.75
PALB2-201ENST00000261584 PORCNQ9H237 461 aa10.34□□□□□ -0.75
PALB2-201ENST00000261584 NMRAL1Q9HBL8 299 aa10.34□□□□□ -0.75
PALB2-201ENST00000261584 SNX15Q9NRS6 342 aa10.34□□□□□ -0.75
PALB2-201ENST00000261584 KANSL3Q9P2N6 904 aa10.34□□□□□ -0.75
PALB2-201ENST00000261584 CYTH4Q9UIA0 394 aa10.34□□□□□ -0.75
PALB2-201ENST00000261584 VANGL2Q9ULK5 521 aa10.34□□□□□ -0.75
PALB2-201ENST00000261584 CRYL1Q9Y2S2 319 aa10.34□□□□□ -0.75
PALB2-201ENST00000261584 TRPM3Q9HCF6 1732 aaPredicted RBP10.34□□□□□ -0.75
PALB2-201ENST00000261584 BCL9LQ86UU0 1499 aa10.34□□□□□ -0.75
PALB2-201ENST00000261584 UQCRBP14927 111 aa10.34□□□□□ -0.75
PALB2-201ENST00000261584 GRIA4P48058 902 aa10.34□□□□□ -0.75
PALB2-201ENST00000261584 SERPINB9P50453 376 aa10.34□□□□□ -0.75
PALB2-201ENST00000261584 PERM1Q5SV97 790 aa10.34□□□□□ -0.75
PALB2-201ENST00000261584 TAS1R3Q7RTX0 852 aa10.34□□□□□ -0.75
PALB2-201ENST00000261584 XYLT1Q86Y38 959 aa10.34□□□□□ -0.75
PALB2-201ENST00000261584 SLC35B2Q8TB61 432 aa10.34□□□□□ -0.75
PALB2-201ENST00000261584 NKD2Q969F2 451 aaPredicted RBP10.34□□□□□ -0.75
PALB2-201ENST00000261584 PEBP4Q96S96 227 aa10.34□□□□□ -0.75
PALB2-201ENST00000261584 OSMRQ99650 979 aa10.34□□□□□ -0.75
PALB2-201ENST00000261584 NRDE2Q9H7Z3 1164 aa10.34□□□□□ -0.75
PALB2-201ENST00000261584 KNL1Q8NG31 2342 aa10.34□□□□□ -0.75
PALB2-201ENST00000261584 INPP4BO15327 924 aa10.33□□□□□ -0.76
PALB2-201ENST00000261584 TRIM13O60858 407 aa10.33□□□□□ -0.76
PALB2-201ENST00000261584 WFS1O76024 890 aa10.33□□□□□ -0.76
PALB2-201ENST00000261584 ZNF23P17027 643 aa10.33□□□□□ -0.76
PALB2-201ENST00000261584 HOXA10P31260 410 aaPredicted RBP10.33□□□□□ -0.76
PALB2-201ENST00000261584 CDK7P50613 346 aa10.33□□□□□ -0.76
PALB2-201ENST00000261584 ACBD5Q5T8D3 534 aaPredicted RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms