RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 INPP4AQ96PE3 977 aaPredicted RBP4.41□□□□□ -1.7
VPS13C-202ENST00000261517 APOL4Q9BPW4 351 aa4.41□□□□□ -1.7
VPS13C-202ENST00000261517 ECSITQ9BQ95 431 aa4.41□□□□□ -1.7
VPS13C-202ENST00000261517 ATP13A3Q9H7F0 1226 aa4.41□□□□□ -1.7
VPS13C-202ENST00000261517 THUMPD1Q9NXG2 353 aaKnown RBP4.41□□□□□ -1.7
VPS13C-202ENST00000261517 RPS6KA6Q9UK32 745 aa4.41□□□□□ -1.7
VPS13C-202ENST00000261517 SNX6Q9UNH7 406 aa4.41□□□□□ -1.7
VPS13C-202ENST00000261517 CRYBG1Q9Y4K1 1723 aa4.41□□□□□ -1.7
VPS13C-202ENST00000261517 TAF4O00268 1085 aa4.41□□□□□ -1.7
VPS13C-202ENST00000261517 RGS14O43566 566 aa4.41□□□□□ -1.7
VPS13C-202ENST00000261517 IPO13O94829 963 aaKnown RBP4.41□□□□□ -1.7
VPS13C-202ENST00000261517 MAPKAPK2P49137 400 aa4.41□□□□□ -1.7
VPS13C-202ENST00000261517 PSMD5Q16401 504 aa4.41□□□□□ -1.7
VPS13C-202ENST00000261517 FAM45BPQ6NSW5 357 aa4.41□□□□□ -1.7
VPS13C-202ENST00000261517 DRICH1Q6PGQ1 229 aaPredicted RBP4.41□□□□□ -1.7
VPS13C-202ENST00000261517 FAM45AQ8TCE6 357 aa4.41□□□□□ -1.7
VPS13C-202ENST00000261517 GLMNQ92990 594 aa4.41□□□□□ -1.7
VPS13C-202ENST00000261517 RNF145Q96MT1 663 aa4.41□□□□□ -1.7
VPS13C-202ENST00000261517 TBL1YQ9BQ87 522 aa4.41□□□□□ -1.7
VPS13C-202ENST00000261517 FAIM2Q9BWQ8 316 aa4.41□□□□□ -1.7
VPS13C-202ENST00000261517 GDF3Q9NR23 364 aa4.41□□□□□ -1.7
VPS13C-202ENST00000261517 LGALS2P05162 132 aa4.41□□□□□ -1.7
VPS13C-202ENST00000261517 SRPRAP08240 638 aaKnown RBP4.41□□□□□ -1.7
VPS13C-202ENST00000261517 TPSB2P20231 275 aa4.41□□□□□ -1.7
VPS13C-202ENST00000261517 VSNL1P62760 191 aa4.41□□□□□ -1.7
VPS13C-202ENST00000261517 TPSAB1Q15661 275 aa4.41□□□□□ -1.7
VPS13C-202ENST00000261517 CCDC60Q8IWA6 550 aaPredicted RBP4.41□□□□□ -1.7
VPS13C-202ENST00000261517 KYQ8NBH2 561 aa4.41□□□□□ -1.7
VPS13C-202ENST00000261517 EME1Q96AY2 570 aa4.41□□□□□ -1.7
VPS13C-202ENST00000261517 DUSP11O75319 330 aaKnown RBP4.4□□□□□ -1.7
VPS13C-202ENST00000261517 LCA5LO95447 670 aa4.4□□□□□ -1.7
VPS13C-202ENST00000261517 GSTM1P09488 218 aa4.4□□□□□ -1.7
VPS13C-202ENST00000261517 NUDT17P0C025 328 aa4.4□□□□□ -1.7
VPS13C-202ENST00000261517 ACADMP11310 421 aa4.4□□□□□ -1.7
VPS13C-202ENST00000261517 PTPN4P29074 926 aa4.4□□□□□ -1.7
VPS13C-202ENST00000261517 GSTM4Q03013 218 aa4.4□□□□□ -1.7
VPS13C-202ENST00000261517 FAM187BQ17R55 369 aa4.4□□□□□ -1.7
VPS13C-202ENST00000261517 C16orf87Q6PH81 154 aa4.4□□□□□ -1.7
VPS13C-202ENST00000261517 CNBD2Q96M20 576 aa4.4□□□□□ -1.7
VPS13C-202ENST00000261517 C9orf16Q9BUW7 83 aa4.4□□□□□ -1.7
VPS13C-202ENST00000261517 SEMA6BQ9H3T3 888 aa4.4□□□□□ -1.7
VPS13C-202ENST00000261517 FANCFQ9NPI8 374 aa4.4□□□□□ -1.7
VPS13C-202ENST00000261517 MRPL17Q9NRX2 175 aaKnown RBP4.4□□□□□ -1.7
VPS13C-202ENST00000261517 CYP39A1Q9NYL5 469 aa4.4□□□□□ -1.7
VPS13C-202ENST00000261517 PCDHGC3Q9UN70 934 aa4.4□□□□□ -1.7
VPS13C-202ENST00000261517 AKAP3O75969 853 aa4.4□□□□□ -1.7
VPS13C-202ENST00000261517 PPIGQ13427 754 aaKnown RBP eCLIP4.4□□□□□ -1.79e-7■■□□□ 14.5
VPS13C-202ENST00000261517 PRR23BQ6ZRT6 265 aa4.4□□□□□ -1.7
VPS13C-202ENST00000261517 BBS12Q6ZW61 710 aa4.4□□□□□ -1.7
VPS13C-202ENST00000261517 TMPRSS6Q8IU80 811 aa4.4□□□□□ -1.7
VPS13C-202ENST00000261517 DENND1AQ8TEH3 1009 aa4.4□□□□□ -1.7
VPS13C-202ENST00000261517 PPP3R2Q96LZ3 170 aa4.4□□□□□ -1.7
VPS13C-202ENST00000261517 Q96MT0 163 aa4.4□□□□□ -1.7
VPS13C-202ENST00000261517 TCF12Q99081 682 aa4.4□□□□□ -1.7
VPS13C-202ENST00000261517 SLC13A1Q9BZW2 595 aa4.4□□□□□ -1.7
VPS13C-202ENST00000261517 ROGDIQ9GZN7 287 aa4.4□□□□□ -1.7
VPS13C-202ENST00000261517 ABI2Q9NYB9 513 aaPredicted RBP4.4□□□□□ -1.7
VPS13C-202ENST00000261517 HEBP2Q9Y5Z4 205 aa4.4□□□□□ -1.7
VPS13C-202ENST00000261517 KDM4FA0A1W2PPD8 638 aa4.4□□□□□ -1.7
VPS13C-202ENST00000261517 MAGEA13PA6NCF6 341 aa4.4□□□□□ -1.7
VPS13C-202ENST00000261517 SMIM22K7EJ46 135 aa4.4□□□□□ -1.7
VPS13C-202ENST00000261517 PGK2P07205 417 aa4.4□□□□□ -1.7
VPS13C-202ENST00000261517 POLR2EP19388 210 aaKnown RBP4.4□□□□□ -1.7
VPS13C-202ENST00000261517 SERPINH1P50454 418 aaKnown RBP4.4□□□□□ -1.7
VPS13C-202ENST00000261517 SESN2P58004 480 aaPredicted RBP4.4□□□□□ -1.7
VPS13C-202ENST00000261517 SPDYAQ5MJ70 313 aa4.4□□□□□ -1.7
VPS13C-202ENST00000261517 ARMC12Q5T9G4 340 aa4.4□□□□□ -1.7
VPS13C-202ENST00000261517 CD101Q93033 1021 aa4.4□□□□□ -1.7
VPS13C-202ENST00000261517 XPNPEP3Q9NQH7 507 aa4.4□□□□□ -1.7
VPS13C-202ENST00000261517 NDUFAF1Q9Y375 327 aa4.4□□□□□ -1.7
VPS13C-202ENST00000261517 KRT75O95678 551 aa4.4□□□□□ -1.7
VPS13C-202ENST00000261517 TKTL1P51854 596 aa4.4□□□□□ -1.7
VPS13C-202ENST00000261517 LAPTM5Q13571 262 aa4.4□□□□□ -1.7
VPS13C-202ENST00000261517 CDK20Q8IZL9 346 aa4.4□□□□□ -1.7
VPS13C-202ENST00000261517 WFIKKN2Q8TEU8 576 aa4.4□□□□□ -1.7
VPS13C-202ENST00000261517 TMEM159Q96B96 161 aa4.4□□□□□ -1.7
VPS13C-202ENST00000261517 RGS18Q9NS28 235 aa4.4□□□□□ -1.7
VPS13C-202ENST00000261517 HMGXB4Q9UGU5 601 aa4.4□□□□□ -1.7
VPS13C-202ENST00000261517 MGAT4DA6NG13 374 aa4.4□□□□□ -1.7
VPS13C-202ENST00000261517 ASLP04424 464 aa4.4□□□□□ -1.7
VPS13C-202ENST00000261517 TLX1P31314 330 aaPredicted RBP4.4□□□□□ -1.7
VPS13C-202ENST00000261517 ATP5C1P36542 298 aaKnown RBP4.4□□□□□ -1.7
VPS13C-202ENST00000261517 PRIM2P49643 509 aa4.4□□□□□ -1.7
VPS13C-202ENST00000261517 RHOAP61586 193 aa4.4□□□□□ -1.7
VPS13C-202ENST00000261517 CRELD2Q6UXH1 353 aaPredicted RBP4.4□□□□□ -1.7
VPS13C-202ENST00000261517 FAM47EQ6ZV65 393 aa4.4□□□□□ -1.7
VPS13C-202ENST00000261517 REXO1L1PQ8IX06 675 aa4.4□□□□□ -1.7
VPS13C-202ENST00000261517 FAM71DQ8N9W8 422 aa4.4□□□□□ -1.7
VPS13C-202ENST00000261517 L3MBTL3Q96JM7 780 aaPredicted RBP4.4□□□□□ -1.7
VPS13C-202ENST00000261517 CHP1Q99653 195 aa4.4□□□□□ -1.7
VPS13C-202ENST00000261517 ACO2Q99798 780 aaKnown RBP4.4□□□□□ -1.7
VPS13C-202ENST00000261517 IL17RBQ9NRM6 502 aa4.4□□□□□ -1.7
VPS13C-202ENST00000261517 CLCA2Q9UQC9 943 aa4.4□□□□□ -1.7
VPS13C-202ENST00000261517 CCDC154A6NI56 674 aa4.4□□□□□ -1.71
VPS13C-202ENST00000261517 TRIM49D1C9J1S8 452 aa4.4□□□□□ -1.71
VPS13C-202ENST00000261517 STX11O75558 287 aa4.4□□□□□ -1.71
VPS13C-202ENST00000261517 OCM2P0CE71 109 aa4.4□□□□□ -1.71
VPS13C-202ENST00000261517 OCMP0CE72 109 aaPredicted RBP4.4□□□□□ -1.71
VPS13C-202ENST00000261517 SLC9A1P19634 815 aa4.4□□□□□ -1.71
VPS13C-202ENST00000261517 MMP13P45452 471 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms