RNA–Protein interactions for RNA: ENST00000259003.14

CSHL1-201, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 1 (best) BASIC

Gene CSHL1, Length 739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-201ENST00000259003 C9orf64Q5T6V5 341 aa13.15□□□□□ -0.3
CSHL1-201ENST00000259003 PMF1Q6P1K2 205 aa13.15□□□□□ -0.3
CSHL1-201ENST00000259003 MMAAQ8IVH4 418 aaKnown RBP13.15□□□□□ -0.3
CSHL1-201ENST00000259003 SCUBE3Q8IX30 993 aa13.15□□□□□ -0.3
CSHL1-201ENST00000259003 GUF1Q8N442 669 aaKnown RBP13.15□□□□□ -0.3
CSHL1-201ENST00000259003 AADATQ8N5Z0 425 aa13.15□□□□□ -0.3
CSHL1-201ENST00000259003 EID2Q8N6I1 236 aa13.15□□□□□ -0.3
CSHL1-201ENST00000259003 PDCD7Q8N8D1 485 aaKnown RBP13.15□□□□□ -0.3
CSHL1-201ENST00000259003 KAT5Q92993 513 aa13.15□□□□□ -0.3
CSHL1-201ENST00000259003 FAM129BQ96TA1 746 aa13.15□□□□□ -0.3
CSHL1-201ENST00000259003 NUCKS1Q9H1E3 243 aaKnown RBP13.15□□□□□ -0.3
CSHL1-201ENST00000259003 SGK2Q9HBY8 427 aa13.15□□□□□ -0.3
CSHL1-201ENST00000259003 SLCO3A1Q9UIG8 710 aa13.15□□□□□ -0.3
CSHL1-201ENST00000259003 ZDHHC9Q9Y397 364 aa13.15□□□□□ -0.3
CSHL1-201ENST00000259003 TENM4Q6N022 2769 aa13.15□□□□□ -0.31
CSHL1-201ENST00000259003 COL27A1Q8IZC6 1860 aaPredicted RBP13.14□□□□□ -0.31
CSHL1-201ENST00000259003 PAPSS1O43252 624 aaPredicted RBP13.14□□□□□ -0.31
CSHL1-201ENST00000259003 ACSL4O60488 711 aa13.14□□□□□ -0.31
CSHL1-201ENST00000259003 LDOC1O95751 146 aaPredicted RBP13.14□□□□□ -0.31
CSHL1-201ENST00000259003 GTF2H1P32780 548 aa13.14□□□□□ -0.31
CSHL1-201ENST00000259003 SYKP43405 635 aa13.14□□□□□ -0.31
CSHL1-201ENST00000259003 STK19P49842 368 aaPredicted RBP13.14□□□□□ -0.31
CSHL1-201ENST00000259003 BCAT1P54687 386 aa13.14□□□□□ -0.31
CSHL1-201ENST00000259003 PPP2CBP62714 309 aa13.14□□□□□ -0.31
CSHL1-201ENST00000259003 RACK1P63244 317 aaKnown RBP13.14□□□□□ -0.31
CSHL1-201ENST00000259003 PPP2CAP67775 309 aa13.14□□□□□ -0.31
CSHL1-201ENST00000259003 SEMG2Q02383 582 aa13.14□□□□□ -0.31
CSHL1-201ENST00000259003 TARDBPQ13148 414 aaKnown RBP eCLIP13.14□□□□□ -0.31
CSHL1-201ENST00000259003 CUL2Q13617 745 aa13.14□□□□□ -0.31
CSHL1-201ENST00000259003 CST6Q15828 149 aa13.14□□□□□ -0.31
CSHL1-201ENST00000259003 SGO2Q562F6 1265 aa13.14□□□□□ -0.31
CSHL1-201ENST00000259003 DCAF17Q5H9S7 520 aaPredicted RBP13.14□□□□□ -0.31
CSHL1-201ENST00000259003 MSANTD2Q6P1R3 559 aa13.14□□□□□ -0.31
CSHL1-201ENST00000259003 APCDD1Q8J025 514 aa13.14□□□□□ -0.31
CSHL1-201ENST00000259003 STK40Q8N2I9 435 aa13.14□□□□□ -0.31
CSHL1-201ENST00000259003 CARNMT1Q8N4J0 409 aa13.14□□□□□ -0.31
CSHL1-201ENST00000259003 CCDC150Q8NCX0 1101 aa13.14□□□□□ -0.31
CSHL1-201ENST00000259003 SAP25Q8TEE9 199 aa13.14□□□□□ -0.31
CSHL1-201ENST00000259003 TTC17Q96AE7 1141 aa13.14□□□□□ -0.31
CSHL1-201ENST00000259003 CNDP2Q96KP4 475 aaKnown RBP13.14□□□□□ -0.31
CSHL1-201ENST00000259003 FCRL2Q96LA5 508 aaPredicted RBP13.14□□□□□ -0.31
CSHL1-201ENST00000259003 IPO9Q96P70 1041 aaKnown RBP13.14□□□□□ -0.31
CSHL1-201ENST00000259003 ELF4Q99607 663 aaPredicted RBP13.14□□□□□ -0.31
CSHL1-201ENST00000259003 OLA1Q9NTK5 396 aaKnown RBP13.14□□□□□ -0.31
CSHL1-201ENST00000259003 DOCK4Q8N1I0 1966 aa13.14□□□□□ -0.31
CSHL1-201ENST00000259003 RNASEH2AO75792 299 aaKnown RBP13.13□□□□□ -0.31
CSHL1-201ENST00000259003 ATP5BP06576 529 aaKnown RBP13.13□□□□□ -0.31
CSHL1-201ENST00000259003 PSMD8P48556 350 aa13.13□□□□□ -0.31
CSHL1-201ENST00000259003 ACADVLP49748 655 aa13.13□□□□□ -0.31
CSHL1-201ENST00000259003 C21orf59P57076 290 aa13.13□□□□□ -0.31
CSHL1-201ENST00000259003 TBX4P57082 545 aa13.13□□□□□ -0.31
CSHL1-201ENST00000259003 HNRNPA1L2Q32P51 320 aaKnown RBP13.13□□□□□ -0.31
CSHL1-201ENST00000259003 TTC31Q49AM3 519 aaPredicted RBP13.13□□□□□ -0.31
CSHL1-201ENST00000259003 HES3Q5TGS1 186 aa13.13□□□□□ -0.31
CSHL1-201ENST00000259003 TCERG1LQ5VWI1 586 aa13.13□□□□□ -0.31
CSHL1-201ENST00000259003 SPATS2Q86XZ4 545 aaKnown RBP13.13□□□□□ -0.31
CSHL1-201ENST00000259003 MFN1Q8IWA4 741 aa13.13□□□□□ -0.31
CSHL1-201ENST00000259003 SIX6OS1Q8N1H7 587 aa13.13□□□□□ -0.31
CSHL1-201ENST00000259003 FIBINQ8TAL6 211 aa13.13□□□□□ -0.31
CSHL1-201ENST00000259003 KCTD13Q8WZ19 329 aa13.13□□□□□ -0.31
CSHL1-201ENST00000259003 ERCC4Q92889 916 aaPredicted RBP13.13□□□□□ -0.31
CSHL1-201ENST00000259003 RPL10LQ96L21 214 aaKnown RBP13.13□□□□□ -0.31
CSHL1-201ENST00000259003 ACE2Q9BYF1 805 aaPredicted RBP13.13□□□□□ -0.31
CSHL1-201ENST00000259003 AASDHPPTQ9NRN7 309 aa13.13□□□□□ -0.31
CSHL1-201ENST00000259003 ABCC13Q9NSE7 274 aa13.13□□□□□ -0.31
CSHL1-201ENST00000259003 SUN2Q9UH99 717 aa13.13□□□□□ -0.31
CSHL1-201ENST00000259003 CFAP45Q9UL16 551 aa13.13□□□□□ -0.31
CSHL1-201ENST00000259003 ERVW-1Q9UQF0 538 aa13.13□□□□□ -0.31
CSHL1-201ENST00000259003 CA5BQ9Y2D0 317 aa13.13□□□□□ -0.31
CSHL1-201ENST00000259003 FAM237AA0A1B0GTK4 181 aa13.12□□□□□ -0.31
CSHL1-201ENST00000259003 TRIM49BA6NDI0 452 aa13.12□□□□□ -0.31
CSHL1-201ENST00000259003 LATS1O95835 1130 aa13.12□□□□□ -0.31
CSHL1-201ENST00000259003 ITGAVP06756 1048 aa13.12□□□□□ -0.31
CSHL1-201ENST00000259003 VDRP11473 427 aa13.12□□□□□ -0.31
CSHL1-201ENST00000259003 JUPP14923 745 aa13.12□□□□□ -0.31
CSHL1-201ENST00000259003 BRD2P25440 801 aaKnown RBP13.12□□□□□ -0.31
CSHL1-201ENST00000259003 SLC8A1P32418 973 aa13.12□□□□□ -0.31
CSHL1-201ENST00000259003 ABCG1P45844 678 aa13.12□□□□□ -0.31
CSHL1-201ENST00000259003 PITX1P78337 314 aaPredicted RBP13.12□□□□□ -0.31
CSHL1-201ENST00000259003 ZBTB16Q05516 673 aa13.12□□□□□ -0.31
CSHL1-201ENST00000259003 ENPEPQ07075 957 aa13.12□□□□□ -0.31
CSHL1-201ENST00000259003 DCAF6Q58WW2 860 aa13.12□□□□□ -0.31
CSHL1-201ENST00000259003 PITRM1Q5JRX3 1037 aa13.12□□□□□ -0.31
CSHL1-201ENST00000259003 KRBA2Q6ZNG9 492 aa13.12□□□□□ -0.31
CSHL1-201ENST00000259003 USP30Q70CQ3 517 aa13.12□□□□□ -0.31
CSHL1-201ENST00000259003 KANSL1Q7Z3B3 1105 aa13.12□□□□□ -0.31
CSHL1-201ENST00000259003 TMPRSS12Q86WS5 348 aa13.12□□□□□ -0.31
CSHL1-201ENST00000259003 CIR1Q86X95 450 aaPredicted RBP13.12□□□□□ -0.31
CSHL1-201ENST00000259003 SLC35F5Q8WV83 523 aa13.12□□□□□ -0.31
CSHL1-201ENST00000259003 TSC1Q92574 1164 aa13.12□□□□□ -0.31
CSHL1-201ENST00000259003 PTPRN2Q92932 1015 aa13.12□□□□□ -0.31
CSHL1-201ENST00000259003 SNX21Q969T3 373 aa13.12□□□□□ -0.31
CSHL1-201ENST00000259003 MIS12Q9H081 205 aa13.12□□□□□ -0.31
CSHL1-201ENST00000259003 PRORYQ9H606 182 aa13.12□□□□□ -0.31
CSHL1-201ENST00000259003 CNGB3Q9NQW8 809 aa13.12□□□□□ -0.31
CSHL1-201ENST00000259003 HESX1Q9UBX0 185 aa13.12□□□□□ -0.31
CSHL1-201ENST00000259003 USP25Q9UHP3 1055 aa13.12□□□□□ -0.31
CSHL1-201ENST00000259003 NAALADL1Q9UQQ1 740 aa13.12□□□□□ -0.31
CSHL1-201ENST00000259003 COQ4Q9Y3A0 265 aa13.12□□□□□ -0.31
CSHL1-201ENST00000259003 EIF4E1BA6NMX2 242 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms