RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 TTC9BQ8N6N2 239 aa15.04■□□□□ -0
TRAFD1-201ENST00000257604 PNPLA1Q8N8W4 532 aa15.04■□□□□ -0
TRAFD1-201ENST00000257604 OR52K1Q8NGK4 314 aa15.04■□□□□ -0
TRAFD1-201ENST00000257604 ZNF395Q9H8N7 513 aaPredicted RBP15.04■□□□□ -0
TRAFD1-201ENST00000257604 C9IYK1 514 aa15.04■□□□□ -0
TRAFD1-201ENST00000257604 ADAMTS4O75173 837 aa15.04■□□□□ -0
TRAFD1-201ENST00000257604 TADA2AO75478 443 aa15.04■□□□□ -0
TRAFD1-201ENST00000257604 ENDOD1O94919 500 aa15.04■□□□□ -0
TRAFD1-201ENST00000257604 ERVK-10P10266 1014 aa15.04■□□□□ -0
TRAFD1-201ENST00000257604 TSPY1Q01534 308 aa15.04■□□□□ -0
TRAFD1-201ENST00000257604 KLHL38Q2WGJ6 581 aa15.04■□□□□ -0
TRAFD1-201ENST00000257604 BTBD8Q5XKL5 378 aa15.04■□□□□ -0
TRAFD1-201ENST00000257604 C16orf46Q6P387 395 aa15.04■□□□□ -0
TRAFD1-201ENST00000257604 UNC5AQ6ZN44 842 aa15.04■□□□□ -0
TRAFD1-201ENST00000257604 ZCCHC23Q6ZST2 131 aa15.04■□□□□ -0
TRAFD1-201ENST00000257604 LRRC6Q86X45 466 aa15.04■□□□□ -0
TRAFD1-201ENST00000257604 STK32AQ8WU08 396 aa15.04■□□□□ -0
TRAFD1-201ENST00000257604 SMARCD1Q96GM5 515 aa15.04■□□□□ -0
TRAFD1-201ENST00000257604 ACSS3Q9H6R3 686 aa15.04■□□□□ -0
TRAFD1-201ENST00000257604 STARD7Q9NQZ5 370 aa15.04■□□□□ -0
TRAFD1-201ENST00000257604 ZSWIM8A7E2V4 1837 aa15.04■□□□□ -0
TRAFD1-201ENST00000257604 STK10O94804 968 aaKnown RBP15.04■□□□□ -0
TRAFD1-201ENST00000257604 DDHD2O94830 711 aa15.04■□□□□ -0
TRAFD1-201ENST00000257604 ITKQ08881 620 aa15.04■□□□□ -0
TRAFD1-201ENST00000257604 GRIK3Q13003 919 aa15.04■□□□□ -0
TRAFD1-201ENST00000257604 ARHGAP36Q6ZRI8 547 aa15.04■□□□□ -0
TRAFD1-201ENST00000257604 DEFB128Q7Z7B8 93 aa15.04■□□□□ -0
TRAFD1-201ENST00000257604 TAC4Q86UU9 113 aa15.04■□□□□ -0
TRAFD1-201ENST00000257604 UCMAQ8WVF2 138 aa15.04■□□□□ -0
TRAFD1-201ENST00000257604 PRR11Q96HE9 360 aaPredicted RBP15.04■□□□□ -0
TRAFD1-201ENST00000257604 COLEC11Q9BWP8 271 aa15.04■□□□□ -0
TRAFD1-201ENST00000257604 TBC1D10AQ9BXI6 508 aa15.04■□□□□ -0
TRAFD1-201ENST00000257604 SMYD2Q9NRG4 433 aa15.04■□□□□ -0
TRAFD1-201ENST00000257604 PQBP1O60828 265 aaKnown RBP15.03■□□□□ -0
TRAFD1-201ENST00000257604 PEX11AO75192 247 aa15.03■□□□□ -0
TRAFD1-201ENST00000257604 CSH1P0DML2 217 aa15.03■□□□□ -0
TRAFD1-201ENST00000257604 CSH2P0DML3 217 aa15.03■□□□□ -0
TRAFD1-201ENST00000257604 CCL23P55773 120 aa15.03■□□□□ -0
TRAFD1-201ENST00000257604 SARNPP82979 210 aaKnown RBP15.03■□□□□ -0
TRAFD1-201ENST00000257604 BLMHQ13867 455 aa15.03■□□□□ -0
TRAFD1-201ENST00000257604 TAZQ16635 292 aa15.03■□□□□ -0
TRAFD1-201ENST00000257604 OTUD1Q5VV17 481 aaPredicted RBP15.03■□□□□ -0
TRAFD1-201ENST00000257604 NPWQ8N729 165 aa15.03■□□□□ -0
TRAFD1-201ENST00000257604 TEKT4Q8WW24 435 aa15.03■□□□□ -0
TRAFD1-201ENST00000257604 AZIN2Q96A70 460 aa15.03■□□□□ -0
TRAFD1-201ENST00000257604 CAPNS2Q96L46 248 aa15.03■□□□□ -0
TRAFD1-201ENST00000257604 DDX50Q9BQ39 737 aaKnown RBP15.03■□□□□ -0
TRAFD1-201ENST00000257604 TXNDC16Q9P2K2 825 aa15.03■□□□□ -0
TRAFD1-201ENST00000257604 TLL2Q9Y6L7 1015 aa15.03■□□□□ -0
TRAFD1-201ENST00000257604 TTC24A2A3L6 582 aaPredicted RBP15.03■□□□□ -0
TRAFD1-201ENST00000257604 CFAP69A5D8W1 941 aa15.03■□□□□ -0
TRAFD1-201ENST00000257604 DPYSL4O14531 572 aa15.03■□□□□ -0
TRAFD1-201ENST00000257604 COPEO14579 308 aa15.03■□□□□ -0
TRAFD1-201ENST00000257604 CCNB1P14635 433 aa15.03■□□□□ -0
TRAFD1-201ENST00000257604 BGNP21810 368 aa15.03■□□□□ -0
TRAFD1-201ENST00000257604 LRPAP1P30533 357 aa15.03■□□□□ -0
TRAFD1-201ENST00000257604 PDE1BQ01064 536 aa15.03■□□□□ -0
TRAFD1-201ENST00000257604 TAF1BQ53T94 588 aaPredicted RBP15.03■□□□□ -0
TRAFD1-201ENST00000257604 RAB3IPQ96QF0 476 aaPredicted RBP15.03■□□□□ -0
TRAFD1-201ENST00000257604 SEPT5Q99719 369 aaPredicted RBP15.03■□□□□ -0
TRAFD1-201ENST00000257604 NUMBLQ9Y6R0 609 aa15.03■□□□□ -0
TRAFD1-201ENST00000257604 A0A0U1RQF3 1178 aa15.02■□□□□ -0
TRAFD1-201ENST00000257604 SMIM24O75264 130 aa15.02■□□□□ -0
TRAFD1-201ENST00000257604 LRIG2O94898 1065 aa15.02■□□□□ -0
TRAFD1-201ENST00000257604 MXRA7P84157 204 aa15.02■□□□□ -0
TRAFD1-201ENST00000257604 PCBP1Q15365 356 aaKnown RBP eCLIP15.02■□□□□ -0
TRAFD1-201ENST00000257604 CCDC6Q16204 474 aa15.02■□□□□ -0
TRAFD1-201ENST00000257604 PCSK7Q16549 785 aa15.02■□□□□ -0
TRAFD1-201ENST00000257604 EML3Q32P44 896 aa15.02■□□□□ -0
TRAFD1-201ENST00000257604 ARL13BQ3SXY8 428 aa15.02■□□□□ -0
TRAFD1-201ENST00000257604 RNF43Q68DV7 783 aa15.02■□□□□ -0
TRAFD1-201ENST00000257604 ZNF567Q8N184 647 aa15.02■□□□□ -0
TRAFD1-201ENST00000257604 THEM5Q8N1Q8 247 aa15.02■□□□□ -0
TRAFD1-201ENST00000257604 PPP1R14CQ8TAE6 165 aa15.02■□□□□ -0
TRAFD1-201ENST00000257604 AGR3Q8TD06 166 aa15.02■□□□□ -0
TRAFD1-201ENST00000257604 SCLYQ96I15 445 aa15.02■□□□□ -0
TRAFD1-201ENST00000257604 NPY6RQ99463 290 aa15.02■□□□□ -0
TRAFD1-201ENST00000257604 FOXP3Q9BZS1 431 aa15.02■□□□□ -0
TRAFD1-201ENST00000257604 RNPEPL1Q9HAU8 725 aa15.02■□□□□ -0
TRAFD1-201ENST00000257604 TXLNGQ9NUQ3 528 aa15.02■□□□□ -0
TRAFD1-201ENST00000257604 ZFATQ9P243 1243 aa15.02■□□□□ -0
TRAFD1-201ENST00000257604 TEX264Q9Y6I9 313 aa15.02■□□□□ -0
TRAFD1-201ENST00000257604 IQANK1A0A1B0GTG1 560 aa15.02□□□□□ -0.01
TRAFD1-201ENST00000257604 CPB1P15086 417 aa15.02□□□□□ -0.01
TRAFD1-201ENST00000257604 RNF220Q5VTB9 566 aa15.02□□□□□ -0.01
TRAFD1-201ENST00000257604 FAM171A1Q5VUB5 890 aa15.02□□□□□ -0.01
TRAFD1-201ENST00000257604 ANO7Q6IWH7 933 aa15.02□□□□□ -0.01
TRAFD1-201ENST00000257604 STRADAQ7RTN6 431 aa15.02□□□□□ -0.01
TRAFD1-201ENST00000257604 OTOP3Q7RTS5 596 aa15.02□□□□□ -0.01
TRAFD1-201ENST00000257604 MTDHQ86UE4 582 aaKnown RBP15.02□□□□□ -0.01
TRAFD1-201ENST00000257604 NDUFAF2Q8N183 169 aa15.02□□□□□ -0.01
TRAFD1-201ENST00000257604 SPATA22Q8NHS9 363 aa15.02□□□□□ -0.01
TRAFD1-201ENST00000257604 DCAKDQ8WVC6 231 aa15.02□□□□□ -0.01
TRAFD1-201ENST00000257604 FERMT1Q9BQL6 677 aa15.02□□□□□ -0.01
TRAFD1-201ENST00000257604 RTP3Q9BQQ7 232 aa15.02□□□□□ -0.01
TRAFD1-201ENST00000257604 GIT1Q9Y2X7 761 aa15.02□□□□□ -0.01
TRAFD1-201ENST00000257604 RPS6KL1Q9Y6S9 549 aa15.02□□□□□ -0.01
TRAFD1-201ENST00000257604 UNC80Q8N2C7 3258 aa15.02□□□□□ -0.01
TRAFD1-201ENST00000257604 GABRDO14764 452 aa15.01□□□□□ -0.01
TRAFD1-201ENST00000257604 DAB1O75553 588 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms