RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 CASKIN2Q8WXE0 1202 aa6.89□□□□□ -1.31
PDGFRA-201ENST00000257290 COL26A1Q96A83 441 aa6.89□□□□□ -1.31
PDGFRA-201ENST00000257290 NUAK2Q9H093 628 aa6.89□□□□□ -1.31
PDGFRA-201ENST00000257290 TNKS2Q9H2K2 1166 aa6.89□□□□□ -1.31
PDGFRA-201ENST00000257290 DMGDHQ9UI17 866 aaKnown RBP6.89□□□□□ -1.31
PDGFRA-201ENST00000257290 DBR1Q9UK59 544 aaKnown RBP6.89□□□□□ -1.31
PDGFRA-201ENST00000257290 NDUFB9Q9Y6M9 179 aa6.89□□□□□ -1.31
PDGFRA-201ENST00000257290 SPATA31A1Q5TZJ5 1347 aa6.89□□□□□ -1.31
PDGFRA-201ENST00000257290 FAM149AA5PLN7 773 aa6.89□□□□□ -1.31
PDGFRA-201ENST00000257290 ZNF233A6NK53 670 aa6.89□□□□□ -1.31
PDGFRA-201ENST00000257290 K7ENM7 598 aa6.89□□□□□ -1.31
PDGFRA-201ENST00000257290 ZNF844Q08AG5 666 aa6.89□□□□□ -1.31
PDGFRA-201ENST00000257290 CAMK1Q14012 370 aa6.89□□□□□ -1.31
PDGFRA-201ENST00000257290 SEC23AQ15436 765 aa6.89□□□□□ -1.31
PDGFRA-201ENST00000257290 MACC1Q6ZN28 852 aa6.89□□□□□ -1.31
PDGFRA-201ENST00000257290 TSEN2Q8NCE0 465 aaKnown RBP6.89□□□□□ -1.31
PDGFRA-201ENST00000257290 TRPV1Q8NER1 839 aa6.89□□□□□ -1.31
PDGFRA-201ENST00000257290 TMC2Q8TDI7 906 aa6.89□□□□□ -1.31
PDGFRA-201ENST00000257290 SLC39A13Q96H72 371 aa6.89□□□□□ -1.31
PDGFRA-201ENST00000257290 PPP1R36Q96LQ0 422 aa6.89□□□□□ -1.31
PDGFRA-201ENST00000257290 HAPLN3Q96S86 360 aa6.89□□□□□ -1.31
PDGFRA-201ENST00000257290 TRABDQ9H4I3 376 aa6.89□□□□□ -1.31
PDGFRA-201ENST00000257290 KCNH7Q9NS40 1196 aa6.89□□□□□ -1.31
PDGFRA-201ENST00000257290 MAT2BQ9NZL9 334 aa6.89□□□□□ -1.31
PDGFRA-201ENST00000257290 MED11Q9P086 117 aa6.89□□□□□ -1.31
PDGFRA-201ENST00000257290 STOX2Q9P2F5 926 aaPredicted RBP6.89□□□□□ -1.31
PDGFRA-201ENST00000257290 TRPS1Q9UHF7 1281 aa6.89□□□□□ -1.31
PDGFRA-201ENST00000257290 SERTAD1Q9UHV2 236 aa6.89□□□□□ -1.31
PDGFRA-201ENST00000257290 PCDHB4Q9Y5E5 795 aa6.89□□□□□ -1.31
PDGFRA-201ENST00000257290 ZNF804BA4D1E1 1349 aa6.89□□□□□ -1.31
PDGFRA-201ENST00000257290 INMTO95050 263 aa6.89□□□□□ -1.31
PDGFRA-201ENST00000257290 CDK4P11802 303 aa6.89□□□□□ -1.31
PDGFRA-201ENST00000257290 DEFA5Q01523 94 aa6.89□□□□□ -1.31
PDGFRA-201ENST00000257290 PHKG1Q16816 387 aa6.89□□□□□ -1.31
PDGFRA-201ENST00000257290 NOMO2Q5JPE7 1267 aa6.89□□□□□ -1.31
PDGFRA-201ENST00000257290 MPP5Q8N3R9 675 aa6.89□□□□□ -1.31
PDGFRA-201ENST00000257290 SLC37A3Q8NCC5 494 aa6.89□□□□□ -1.31
PDGFRA-201ENST00000257290 TRIM51Q9BSJ1 452 aa6.89□□□□□ -1.31
PDGFRA-201ENST00000257290 ZNF334Q9HCZ1 680 aaPredicted RBP6.89□□□□□ -1.31
PDGFRA-201ENST00000257290 ANKRD26Q9UPS8 1709 aa6.89□□□□□ -1.31
PDGFRA-201ENST00000257290 TGDSO95455 350 aa6.89□□□□□ -1.31
PDGFRA-201ENST00000257290 ZDHHC11BP0C7U3 371 aa6.89□□□□□ -1.31
PDGFRA-201ENST00000257290 POLR2MP0CAP2 368 aa6.89□□□□□ -1.31
PDGFRA-201ENST00000257290 CHRNA5P30532 468 aa6.89□□□□□ -1.31
PDGFRA-201ENST00000257290 DGKDQ16760 1214 aa6.89□□□□□ -1.31
PDGFRA-201ENST00000257290 ZNF704Q6ZNC4 412 aaPredicted RBP6.89□□□□□ -1.31
PDGFRA-201ENST00000257290 ZBTB49Q6ZSB9 765 aa6.89□□□□□ -1.31
PDGFRA-201ENST00000257290 OR6P1Q8NGX9 317 aa6.89□□□□□ -1.31
PDGFRA-201ENST00000257290 CDRT15Q96T59 188 aa6.89□□□□□ -1.31
PDGFRA-201ENST00000257290 C12orf57Q99622 126 aa6.89□□□□□ -1.31
PDGFRA-201ENST00000257290 ISCA1Q9BUE6 129 aa6.89□□□□□ -1.31
PDGFRA-201ENST00000257290 BRIP1Q9BX63 1249 aa6.89□□□□□ -1.31
PDGFRA-201ENST00000257290 DDX47Q9H0S4 455 aaKnown RBP6.89□□□□□ -1.31
PDGFRA-201ENST00000257290 OR51B5Q9H339 312 aa6.89□□□□□ -1.31
PDGFRA-201ENST00000257290 PABPC3Q9H361 631 aaKnown RBP6.89□□□□□ -1.31
PDGFRA-201ENST00000257290 HPF1Q9NWY4 346 aa6.89□□□□□ -1.31
PDGFRA-201ENST00000257290 MOCS1Q9NZB8 636 aa6.89□□□□□ -1.31
PDGFRA-201ENST00000257290 NOSIPQ9Y314 301 aaKnown RBP6.89□□□□□ -1.31
PDGFRA-201ENST00000257290 REXO2Q9Y3B8 237 aaKnown RBP6.89□□□□□ -1.31
PDGFRA-201ENST00000257290 FARP1Q9Y4F1 1045 aaPredicted RBP6.89□□□□□ -1.31
PDGFRA-201ENST00000257290 RHPN2P1A8MT19 583 aa6.89□□□□□ -1.31
PDGFRA-201ENST00000257290 PPEF1O14829 653 aaPredicted RBP6.89□□□□□ -1.31
PDGFRA-201ENST00000257290 NUAK1O60285 661 aa6.89□□□□□ -1.31
PDGFRA-201ENST00000257290 ADRA2BP18089 450 aa6.89□□□□□ -1.31
PDGFRA-201ENST00000257290 STAT3P40763 770 aa6.89□□□□□ -1.31
PDGFRA-201ENST00000257290 BCAMP50895 628 aa6.89□□□□□ -1.31
PDGFRA-201ENST00000257290 PRMT2P55345 433 aa6.89□□□□□ -1.31
PDGFRA-201ENST00000257290 MYL6P60660 151 aa6.89□□□□□ -1.31
PDGFRA-201ENST00000257290 ENPEPQ07075 957 aa6.89□□□□□ -1.31
PDGFRA-201ENST00000257290 NKX1-1Q15270 411 aaPredicted RBP6.89□□□□□ -1.31
PDGFRA-201ENST00000257290 KRT39Q6A163 491 aa6.89□□□□□ -1.31
PDGFRA-201ENST00000257290 OR52E8Q6IFG1 317 aa6.89□□□□□ -1.31
PDGFRA-201ENST00000257290 DCDC5Q6ZRR9 648 aa6.89□□□□□ -1.31
PDGFRA-201ENST00000257290 IFNEQ86WN2 208 aa6.89□□□□□ -1.31
PDGFRA-201ENST00000257290 PLCZ1Q86YW0 608 aa6.89□□□□□ -1.31
PDGFRA-201ENST00000257290 PTCD3Q96EY7 689 aaKnown RBP6.89□□□□□ -1.31
PDGFRA-201ENST00000257290 PGM2Q96G03 612 aa6.89□□□□□ -1.31
PDGFRA-201ENST00000257290 C7orf26Q96N11 449 aa6.89□□□□□ -1.31
PDGFRA-201ENST00000257290 CTRCQ99895 268 aa6.89□□□□□ -1.31
PDGFRA-201ENST00000257290 BTBD2Q9BX70 525 aa6.89□□□□□ -1.31
PDGFRA-201ENST00000257290 DENND2DQ9H6A0 471 aaPredicted RBP6.89□□□□□ -1.31
PDGFRA-201ENST00000257290 ERVMER34-1Q9H9K5 563 aa6.89□□□□□ -1.31
PDGFRA-201ENST00000257290 ACTR10Q9NZ32 417 aa6.89□□□□□ -1.31
PDGFRA-201ENST00000257290 PPP4R1LQ9P1A2 415 aa6.89□□□□□ -1.31
PDGFRA-201ENST00000257290 COPZ2Q9P299 210 aa6.89□□□□□ -1.31
PDGFRA-201ENST00000257290 DENND3A2RUS2 1198 aa6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 CARNS1A5YM72 827 aa6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 TP73O15350 636 aa6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 GATCO43716 136 aaKnown RBP6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 TGM6O95932 706 aa6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 S100PP25815 95 aa6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 FDFT1P37268 417 aa6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 MTHFRP42898 656 aa6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 ARHGDIAP52565 204 aa6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 NKX2-5P52952 324 aaPredicted RBP6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 YWHAHQ04917 246 aaPredicted RBP6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 SLCO6A1Q86UG4 719 aa6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 CLIP4Q8N3C7 705 aa6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 ENDOVQ8N8Q3 282 aaKnown RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms