RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 PDIA2Q13087 525 aaKnown RBP19.44■□□□□ 0.7
TRIM47-201ENST00000254816 KCNJ11Q14654 390 aa19.44■□□□□ 0.7
TRIM47-201ENST00000254816 ARTNQ5T4W7 220 aa19.44■□□□□ 0.7
TRIM47-201ENST00000254816 PIK3R6Q5UE93 754 aa19.44■□□□□ 0.7
TRIM47-201ENST00000254816 SPATA31D4Q6ZUB0 917 aa19.44■□□□□ 0.7
TRIM47-201ENST00000254816 HOOK3Q86VS8 718 aa19.44■□□□□ 0.7
TRIM47-201ENST00000254816 CCDC13Q8IYE1 715 aa19.44■□□□□ 0.7
TRIM47-201ENST00000254816 MRPL17Q9NRX2 175 aaKnown RBP19.44■□□□□ 0.7
TRIM47-201ENST00000254816 YIPF1Q9Y548 306 aa19.44■□□□□ 0.7
TRIM47-201ENST00000254816 TLR5O60602 858 aa19.44■□□□□ 0.7
TRIM47-201ENST00000254816 GCATO75600 419 aa19.44■□□□□ 0.7
TRIM47-201ENST00000254816 HIF1AQ16665 826 aa19.44■□□□□ 0.7
TRIM47-201ENST00000254816 TPGS2Q68CL5 300 aa19.44■□□□□ 0.7
TRIM47-201ENST00000254816 ANKMY2Q8IV38 441 aa19.44■□□□□ 0.7
TRIM47-201ENST00000254816 ZBED8Q8IZ13 594 aa19.44■□□□□ 0.7
TRIM47-201ENST00000254816 MDM1Q8TC05 714 aa19.44■□□□□ 0.7
TRIM47-201ENST00000254816 EPS8L3Q8TE67 593 aaKnown RBP19.44■□□□□ 0.7
TRIM47-201ENST00000254816 TLCD1Q96CP7 247 aa19.44■□□□□ 0.7
TRIM47-201ENST00000254816 FOXP3Q9BZS1 431 aa19.44■□□□□ 0.7
TRIM47-201ENST00000254816 RASSF4Q9H2L5 321 aa19.44■□□□□ 0.7
TRIM47-201ENST00000254816 NYNRINQ9P2P1 1898 aaKnown RBP19.44■□□□□ 0.7
TRIM47-201ENST00000254816 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.44■□□□□ 0.7
TRIM47-201ENST00000254816 C5orf60A6NFR6 353 aa19.43■□□□□ 0.7
TRIM47-201ENST00000254816 PPP1R12AO14974 1030 aaPredicted RBP19.43■□□□□ 0.7
TRIM47-201ENST00000254816 TEX28O15482 410 aa19.43■□□□□ 0.7
TRIM47-201ENST00000254816 HMGA1P17096 107 aaKnown RBP19.43■□□□□ 0.7
TRIM47-201ENST00000254816 SLCO1A2P46721 670 aa19.43■□□□□ 0.7
TRIM47-201ENST00000254816 RAB33AQ14088 237 aa19.43■□□□□ 0.7
TRIM47-201ENST00000254816 ANKRD20A2Q5SQ80 823 aa19.43■□□□□ 0.7
TRIM47-201ENST00000254816 ANKRD20A1Q5TYW2 823 aa19.43■□□□□ 0.7
TRIM47-201ENST00000254816 ANKRD20A3Q5VUR7 823 aa19.43■□□□□ 0.7
TRIM47-201ENST00000254816 CAPN12Q6ZSI9 719 aa19.43■□□□□ 0.7
TRIM47-201ENST00000254816 ZNF512Q96ME7 567 aaPredicted RBP19.43■□□□□ 0.7
TRIM47-201ENST00000254816 UBE2OQ9C0C9 1292 aaKnown RBP19.43■□□□□ 0.7
TRIM47-201ENST00000254816 OLA1Q9NTK5 396 aaKnown RBP19.43■□□□□ 0.7
TRIM47-201ENST00000254816 NDFIP2Q9NV92 336 aa19.43■□□□□ 0.7
TRIM47-201ENST00000254816 MPP6Q9NZW5 540 aa19.43■□□□□ 0.7
TRIM47-201ENST00000254816 LCHNA4D1U4 455 aa19.42■□□□□ 0.7
TRIM47-201ENST00000254816 E9PAM4 449 aa19.42■□□□□ 0.7
TRIM47-201ENST00000254816 KCNK1O00180 336 aa19.42■□□□□ 0.7
TRIM47-201ENST00000254816 NDC80O14777 642 aa19.42■□□□□ 0.7
TRIM47-201ENST00000254816 PPM1AP35813 382 aa19.42■□□□□ 0.7
TRIM47-201ENST00000254816 ZNF135P52742 658 aaPredicted RBP19.42■□□□□ 0.7
TRIM47-201ENST00000254816 TRIP4Q15650 581 aaPredicted RBP19.42■□□□□ 0.7
TRIM47-201ENST00000254816 MANEALQ5VSG8 457 aa19.42■□□□□ 0.7
TRIM47-201ENST00000254816 CENPUQ71F23 418 aa19.42■□□□□ 0.7
TRIM47-201ENST00000254816 PDZD4Q76G19 769 aaPredicted RBP19.42■□□□□ 0.7
TRIM47-201ENST00000254816 KLHL23Q8NBE8 558 aa19.42■□□□□ 0.7
TRIM47-201ENST00000254816 TBC1D31Q96DN5 1066 aa19.42■□□□□ 0.7
TRIM47-201ENST00000254816 RNF103O00237 685 aa19.42■□□□□ 0.7
TRIM47-201ENST00000254816 PRRG1O14668 218 aa19.42■□□□□ 0.7
TRIM47-201ENST00000254816 ALDH1A3P47895 512 aa19.42■□□□□ 0.7
TRIM47-201ENST00000254816 TUBP50607 506 aa19.42■□□□□ 0.7
TRIM47-201ENST00000254816 TWF1Q12792 350 aa19.42■□□□□ 0.7
TRIM47-201ENST00000254816 PLD1Q13393 1074 aa19.42■□□□□ 0.7
TRIM47-201ENST00000254816 ARHGEF18Q6ZSZ5 1173 aa19.42■□□□□ 0.7
TRIM47-201ENST00000254816 RELL1Q8IUW5 271 aa19.42■□□□□ 0.7
TRIM47-201ENST00000254816 KLC2Q9H0B6 622 aa19.42■□□□□ 0.7
TRIM47-201ENST00000254816 ZBP1Q9H171 429 aa19.42■□□□□ 0.7
TRIM47-201ENST00000254816 VANGL2Q9ULK5 521 aa19.42■□□□□ 0.7
TRIM47-201ENST00000254816 ZMYND8Q9ULU4 1186 aaPredicted RBP19.42■□□□□ 0.7
TRIM47-201ENST00000254816 INSL6Q9Y581 213 aa19.42■□□□□ 0.7
TRIM47-201ENST00000254816 CHADO15335 359 aa19.41■□□□□ 0.7
TRIM47-201ENST00000254816 AVILO75366 819 aa19.41■□□□□ 0.7
TRIM47-201ENST00000254816 APOEP02649 317 aa19.41■□□□□ 0.7
TRIM47-201ENST00000254816 APRTP07741 180 aa19.41■□□□□ 0.7
TRIM47-201ENST00000254816 MLLT6P55198 1093 aaPredicted RBP19.41■□□□□ 0.7
TRIM47-201ENST00000254816 ARL4CP56559 192 aa19.41■□□□□ 0.7
TRIM47-201ENST00000254816 IFI35P80217 286 aaPredicted RBP19.41■□□□□ 0.7
TRIM47-201ENST00000254816 WASHC5Q12768 1159 aa19.41■□□□□ 0.7
TRIM47-201ENST00000254816 LONRF1Q17RB8 773 aa19.41■□□□□ 0.7
TRIM47-201ENST00000254816 MS4A13Q5J8X5 152 aa19.41■□□□□ 0.7
TRIM47-201ENST00000254816 WDR83Q9BRX9 315 aaKnown RBP19.41■□□□□ 0.7
TRIM47-201ENST00000254816 OBSL1O75147 1896 aa19.41■□□□□ 0.7
TRIM47-201ENST00000254816 A0A0A0MRY4 1105 aa19.41■□□□□ 0.7
TRIM47-201ENST00000254816 ELF1P32519 619 aa19.41■□□□□ 0.7
TRIM47-201ENST00000254816 SERPINB6P35237 376 aa19.41■□□□□ 0.7
TRIM47-201ENST00000254816 BBS9Q3SYG4 887 aa19.41■□□□□ 0.7
TRIM47-201ENST00000254816 SPATA13Q96N96 652 aa19.41■□□□□ 0.7
TRIM47-201ENST00000254816 LILRB3O75022 631 aa19.4■□□□□ 0.7
TRIM47-201ENST00000254816 FAM107AO95990 144 aa19.4■□□□□ 0.7
TRIM47-201ENST00000254816 CSH1P0DML2 217 aa19.4■□□□□ 0.7
TRIM47-201ENST00000254816 CSH2P0DML3 217 aa19.4■□□□□ 0.7
TRIM47-201ENST00000254816 SLC2A3P11169 496 aa19.4■□□□□ 0.7
TRIM47-201ENST00000254816 HOXC13P31276 330 aa19.4■□□□□ 0.7
TRIM47-201ENST00000254816 KCNQ1P51787 676 aa19.4■□□□□ 0.7
TRIM47-201ENST00000254816 GALNT2Q10471 571 aa19.4■□□□□ 0.7
TRIM47-201ENST00000254816 TAF12Q16514 161 aa19.4■□□□□ 0.7
TRIM47-201ENST00000254816 ARHGAP36Q6ZRI8 547 aa19.4■□□□□ 0.7
TRIM47-201ENST00000254816 HERC6Q8IVU3 1022 aa19.4■□□□□ 0.7
TRIM47-201ENST00000254816 ZNF567Q8N184 647 aa19.4■□□□□ 0.7
TRIM47-201ENST00000254816 ZNF840PA6NDX5 716 aa19.4■□□□□ 0.7
TRIM47-201ENST00000254816 DFFAO00273 331 aa19.4■□□□□ 0.7
TRIM47-201ENST00000254816 ALOX15BO15296 676 aa19.4■□□□□ 0.7
TRIM47-201ENST00000254816 RGS16O15492 202 aaPredicted RBP19.4■□□□□ 0.7
TRIM47-201ENST00000254816 CNPP09543 421 aaKnown RBP19.4■□□□□ 0.7
TRIM47-201ENST00000254816 GARSP41250 739 aaKnown RBP19.4■□□□□ 0.7
TRIM47-201ENST00000254816 MAGEA9P43362 315 aa19.4■□□□□ 0.7
TRIM47-201ENST00000254816 PPIDQ08752 370 aaKnown RBP19.4■□□□□ 0.7
TRIM47-201ENST00000254816 RAP1GAP2Q684P5 730 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms