RNA–Protein interactions for RNA: ENST00000244763.8

SSR1-201, Transcript of signal sequence receptor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR1, Length 9,669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-201ENST00000244763 SENP8Q96LD8 212 aa7.5□□□□□ -1.21
SSR1-201ENST00000244763 PHTF1Q9UMS5 762 aa7.5□□□□□ -1.21
SSR1-201ENST00000244763 MRPS23Q9Y3D9 190 aaKnown RBP7.5□□□□□ -1.21
SSR1-201ENST00000244763 DDTLA6NHG4 134 aaPredicted RBP7.49□□□□□ -1.21
SSR1-201ENST00000244763 RFX3P48380 749 aa7.49□□□□□ -1.21
SSR1-201ENST00000244763 MSLNQ13421 630 aaPredicted RBP7.49□□□□□ -1.21
SSR1-201ENST00000244763 NFIL3Q16649 462 aa7.49□□□□□ -1.21
SSR1-201ENST00000244763 INTS11Q5TA45 600 aaKnown RBP7.49□□□□□ -1.21
SSR1-201ENST00000244763 SVOPQ8N4V2 548 aa7.49□□□□□ -1.21
SSR1-201ENST00000244763 ATP13A3Q9H7F0 1226 aa7.49□□□□□ -1.21
SSR1-201ENST00000244763 SLC27A6Q9Y2P4 619 aa7.49□□□□□ -1.21
SSR1-201ENST00000244763 TNS2Q63HR2 1409 aa7.49□□□□□ -1.21
SSR1-201ENST00000244763 CTDNEP1O95476 244 aa7.49□□□□□ -1.21
SSR1-201ENST00000244763 NFICP08651 508 aa7.49□□□□□ -1.21
SSR1-201ENST00000244763 NOS3P29474 1203 aa7.49□□□□□ -1.21
SSR1-201ENST00000244763 ALDH9A1P49189 494 aa7.49□□□□□ -1.21
SSR1-201ENST00000244763 MRPS35P82673 323 aaKnown RBP7.49□□□□□ -1.21
SSR1-201ENST00000244763 MILR1Q7Z6M3 343 aa7.49□□□□□ -1.21
SSR1-201ENST00000244763 BEND7Q8N7W2 519 aaPredicted RBP7.49□□□□□ -1.21
SSR1-201ENST00000244763 ATG16L2Q8NAA4 619 aa7.49□□□□□ -1.21
SSR1-201ENST00000244763 TDRD5Q8NAT2 981 aaKnown RBP7.49□□□□□ -1.21
SSR1-201ENST00000244763 ACTRT2Q8TDY3 377 aa7.49□□□□□ -1.21
SSR1-201ENST00000244763 TMEM216Q9P0N5 145 aa7.49□□□□□ -1.21
SSR1-201ENST00000244763 ARHGAP23Q9P227 1491 aa7.49□□□□□ -1.21
SSR1-201ENST00000244763 SMIM31A0A1B0GVY4 71 aa7.49□□□□□ -1.21
SSR1-201ENST00000244763 PIK3CDO00329 1044 aa7.49□□□□□ -1.21
SSR1-201ENST00000244763 ATMINO43313 823 aaPredicted RBP7.49□□□□□ -1.21
SSR1-201ENST00000244763 PMS1P54277 932 aaKnown RBP7.49□□□□□ -1.21
SSR1-201ENST00000244763 CCZ1BP86790 482 aa7.49□□□□□ -1.21
SSR1-201ENST00000244763 CCZ1P86791 482 aaPredicted RBP7.49□□□□□ -1.21
SSR1-201ENST00000244763 CNGA2Q16280 664 aa7.49□□□□□ -1.21
SSR1-201ENST00000244763 USP41Q3LFD5 358 aa7.49□□□□□ -1.21
SSR1-201ENST00000244763 CEP78Q5JTW2 689 aa7.49□□□□□ -1.21
SSR1-201ENST00000244763 KLHL35Q6PF15 583 aa7.49□□□□□ -1.21
SSR1-201ENST00000244763 KCNMB4Q86W47 210 aa7.49□□□□□ -1.21
SSR1-201ENST00000244763 NDOR1Q9UHB4 597 aa7.49□□□□□ -1.21
SSR1-201ENST00000244763 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.49□□□□□ -1.21
SSR1-201ENST00000244763 O00370 1275 aa7.49□□□□□ -1.21
SSR1-201ENST00000244763 ANXA6P08133 673 aa7.49□□□□□ -1.21
SSR1-201ENST00000244763 CYP3A4P08684 503 aa7.49□□□□□ -1.21
SSR1-201ENST00000244763 PSMC3P17980 439 aa7.49□□□□□ -1.21
SSR1-201ENST00000244763 FASP25445 335 aa7.49□□□□□ -1.21
SSR1-201ENST00000244763 MMP13P45452 471 aa7.49□□□□□ -1.21
SSR1-201ENST00000244763 KCNT1Q5JUK3 1230 aa7.49□□□□□ -1.21
SSR1-201ENST00000244763 WDR93Q6P2C0 686 aa7.49□□□□□ -1.21
SSR1-201ENST00000244763 BNC2Q6ZN30 1099 aaPredicted RBP7.49□□□□□ -1.21
SSR1-201ENST00000244763 MLPHQ9BV36 600 aaPredicted RBP7.49□□□□□ -1.21
SSR1-201ENST00000244763 MARCH2Q9P0N8 246 aa7.49□□□□□ -1.21
SSR1-201ENST00000244763 TDRKHQ9Y2W6 561 aaKnown RBP7.49□□□□□ -1.21
SSR1-201ENST00000244763 GIT1Q9Y2X7 761 aa7.49□□□□□ -1.21
SSR1-201ENST00000244763 LOC100653049A0A140TA62 436 aa7.49□□□□□ -1.21
SSR1-201ENST00000244763 KRT34O76011 436 aa7.49□□□□□ -1.21
SSR1-201ENST00000244763 ENDOD1O94919 500 aa7.49□□□□□ -1.21
SSR1-201ENST00000244763 LTFP02788 710 aa7.49□□□□□ -1.21
SSR1-201ENST00000244763 HSD17B3P37058 310 aa7.49□□□□□ -1.21
SSR1-201ENST00000244763 MAP2K5Q13163 448 aa7.49□□□□□ -1.21
SSR1-201ENST00000244763 CSHL1Q14406 222 aa7.49□□□□□ -1.21
SSR1-201ENST00000244763 RRP1BQ14684 758 aaKnown RBP7.49□□□□□ -1.21
SSR1-201ENST00000244763 POU6F1Q14863 301 aa7.49□□□□□ -1.21
SSR1-201ENST00000244763 DDR2Q16832 855 aa7.49□□□□□ -1.21
SSR1-201ENST00000244763 PARP6Q2NL67 630 aa7.49□□□□□ -1.21
SSR1-201ENST00000244763 NOMO2Q5JPE7 1267 aa7.49□□□□□ -1.21
SSR1-201ENST00000244763 DACT2Q5SW24 774 aa7.49□□□□□ -1.21
SSR1-201ENST00000244763 SMIM5Q71RC9 77 aa7.49□□□□□ -1.21
SSR1-201ENST00000244763 PLPPR4Q7Z2D5 763 aa7.49□□□□□ -1.21
SSR1-201ENST00000244763 LPCAT1Q8NF37 534 aa7.49□□□□□ -1.21
SSR1-201ENST00000244763 GLIS2Q9BZE0 524 aaPredicted RBP7.49□□□□□ -1.21
SSR1-201ENST00000244763 HEY2Q9UBP5 337 aa7.49□□□□□ -1.21
SSR1-201ENST00000244763 SNX6Q9UNH7 406 aa7.49□□□□□ -1.21
SSR1-201ENST00000244763 CASZ1Q86V15 1759 aa7.49□□□□□ -1.21
SSR1-201ENST00000244763 WWP2O00308 870 aa7.49□□□□□ -1.21
SSR1-201ENST00000244763 STX11O75558 287 aa7.49□□□□□ -1.21
SSR1-201ENST00000244763 SKAP2O75563 359 aaPredicted RBP7.49□□□□□ -1.21
SSR1-201ENST00000244763 HIST1H2ABP04908 130 aa7.49□□□□□ -1.21
SSR1-201ENST00000244763 CASP4P49662 377 aa7.49□□□□□ -1.21
SSR1-201ENST00000244763 IL2P60568 153 aa7.49□□□□□ -1.21
SSR1-201ENST00000244763 STX4Q12846 297 aa7.49□□□□□ -1.21
SSR1-201ENST00000244763 GRIK3Q13003 919 aa7.49□□□□□ -1.21
SSR1-201ENST00000244763 RAD9BQ6WBX8 426 aa7.49□□□□□ -1.21
SSR1-201ENST00000244763 MACC1Q6ZN28 852 aa7.49□□□□□ -1.21
SSR1-201ENST00000244763 HIST3H2AQ7L7L0 130 aa7.49□□□□□ -1.21
SSR1-201ENST00000244763 GALNT4Q8N4A0 578 aa7.49□□□□□ -1.21
SSR1-201ENST00000244763 HIST1H2ACQ93077 130 aa7.49□□□□□ -1.21
SSR1-201ENST00000244763 FAIM2Q9BWQ8 316 aa7.49□□□□□ -1.21
SSR1-201ENST00000244763 TKTL2Q9H0I9 626 aa7.49□□□□□ -1.21
SSR1-201ENST00000244763 PORCNQ9H237 461 aa7.49□□□□□ -1.21
SSR1-201ENST00000244763 OPTCQ9UBM4 332 aa7.49□□□□□ -1.21
SSR1-201ENST00000244763 GNPTGQ9UJJ9 305 aa7.49□□□□□ -1.21
SSR1-201ENST00000244763 TAF6LQ9Y6J9 622 aa7.49□□□□□ -1.21
SSR1-201ENST00000244763 CLUHO75153 1309 aa7.49□□□□□ -1.21
SSR1-201ENST00000244763 SPIDRQ14159 915 aa7.49□□□□□ -1.21
SSR1-201ENST00000244763 SLC9A5Q14940 896 aa7.49□□□□□ -1.21
SSR1-201ENST00000244763 EPC2Q52LR7 807 aa7.49□□□□□ -1.21
SSR1-201ENST00000244763 RGMBQ6NW40 437 aa7.49□□□□□ -1.21
SSR1-201ENST00000244763 DCLRE1AQ6PJP8 1040 aa7.49□□□□□ -1.21
SSR1-201ENST00000244763 MCOLN2Q8IZK6 566 aa7.49□□□□□ -1.21
SSR1-201ENST00000244763 FAM45AQ8TCE6 357 aa7.49□□□□□ -1.21
SSR1-201ENST00000244763 NSMCE2Q96MF7 247 aa7.49□□□□□ -1.21
SSR1-201ENST00000244763 S100A13Q99584 98 aa7.49□□□□□ -1.21
SSR1-201ENST00000244763 CATSPERZQ9NTU4 200 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms