RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 TRIP12Q14669 1992 aaPredicted RBP16.61■□□□□ 0.25
UBE3D-201ENST00000237186 A0A0G2JND7 137 aa16.61■□□□□ 0.25
UBE3D-201ENST00000237186 ERI2A8K979 691 aaKnown RBP16.61■□□□□ 0.25
UBE3D-201ENST00000237186 AP2A1O95782 977 aa16.61■□□□□ 0.25
UBE3D-201ENST00000237186 BPGMP07738 259 aa16.61■□□□□ 0.25
UBE3D-201ENST00000237186 MX2P20592 715 aa16.61■□□□□ 0.25
UBE3D-201ENST00000237186 CCND1P24385 295 aa16.61■□□□□ 0.25
UBE3D-201ENST00000237186 PTPN4P29074 926 aa16.61■□□□□ 0.25
UBE3D-201ENST00000237186 RAB27AP51159 221 aa16.61■□□□□ 0.25
UBE3D-201ENST00000237186 TPI1P60174 286 aa16.61■□□□□ 0.25
UBE3D-201ENST00000237186 OCRLQ01968 901 aa16.61■□□□□ 0.25
UBE3D-201ENST00000237186 SPANXN3Q5MJ09 141 aa16.61■□□□□ 0.25
UBE3D-201ENST00000237186 PACS1Q6VY07 963 aa16.61■□□□□ 0.25
UBE3D-201ENST00000237186 STKLD1Q8NE28 680 aa16.61■□□□□ 0.25
UBE3D-201ENST00000237186 HDAC11Q96DB2 347 aa16.61■□□□□ 0.25
UBE3D-201ENST00000237186 DDIT4Q9NX09 232 aa16.61■□□□□ 0.25
UBE3D-201ENST00000237186 KCNK4Q9NYG8 393 aa16.61■□□□□ 0.25
UBE3D-201ENST00000237186 HEY2Q9UBP5 337 aa16.61■□□□□ 0.25
UBE3D-201ENST00000237186 TRHDEQ9UKU6 1024 aa16.61■□□□□ 0.25
UBE3D-201ENST00000237186 TSC2P49815 1807 aa16.6■□□□□ 0.25
UBE3D-201ENST00000237186 I3L4J1 428 aa16.6■□□□□ 0.25
UBE3D-201ENST00000237186 SNNO75324 88 aaPredicted RBP16.6■□□□□ 0.25
UBE3D-201ENST00000237186 AMHP03971 560 aa16.6■□□□□ 0.25
UBE3D-201ENST00000237186 POLBP06746 335 aa16.6■□□□□ 0.25
UBE3D-201ENST00000237186 ODC1P11926 461 aa16.6■□□□□ 0.25
UBE3D-201ENST00000237186 SESN2P58004 480 aaPredicted RBP16.6■□□□□ 0.25
UBE3D-201ENST00000237186 BST1Q10588 318 aa16.6■□□□□ 0.25
UBE3D-201ENST00000237186 KRT72Q14CN4 511 aa16.6■□□□□ 0.25
UBE3D-201ENST00000237186 TEX44Q53QW1 395 aa16.6■□□□□ 0.25
UBE3D-201ENST00000237186 KCTD11Q693B1 232 aa16.6■□□□□ 0.25
UBE3D-201ENST00000237186 CASC4Q6P4E1 433 aa16.6■□□□□ 0.25
UBE3D-201ENST00000237186 NUDCD3Q8IVD9 361 aa16.6■□□□□ 0.25
UBE3D-201ENST00000237186 TP53INP2Q8IXH6 220 aa16.6■□□□□ 0.25
UBE3D-201ENST00000237186 DPF3Q92784 378 aa16.6■□□□□ 0.25
UBE3D-201ENST00000237186 PGBD4Q96DM1 585 aa16.6■□□□□ 0.25
UBE3D-201ENST00000237186 VAT1Q99536 393 aa16.6■□□□□ 0.25
UBE3D-201ENST00000237186 GORASP1Q9BQQ3 440 aa16.6■□□□□ 0.25
UBE3D-201ENST00000237186 TMEM120AQ9BXJ8 343 aa16.6■□□□□ 0.25
UBE3D-201ENST00000237186 AGO3Q9H9G7 860 aaKnown RBP16.6■□□□□ 0.25
UBE3D-201ENST00000237186 SPC25Q9HBM1 224 aa16.6■□□□□ 0.25
UBE3D-201ENST00000237186 PCMTD2Q9NV79 361 aa16.6■□□□□ 0.25
UBE3D-201ENST00000237186 SEPT10Q9P0V9 454 aa16.6■□□□□ 0.25
UBE3D-201ENST00000237186 STK38LQ9Y2H1 464 aa16.6■□□□□ 0.25
UBE3D-201ENST00000237186 CTGFP29279 349 aa16.59■□□□□ 0.25
UBE3D-201ENST00000237186 ZNF33AQ06730 810 aa16.59■□□□□ 0.25
UBE3D-201ENST00000237186 GALNT2Q10471 571 aa16.59■□□□□ 0.25
UBE3D-201ENST00000237186 EIF4EBP2Q13542 120 aaPredicted RBP16.59■□□□□ 0.25
UBE3D-201ENST00000237186 DSC3Q14574 896 aa16.59■□□□□ 0.25
UBE3D-201ENST00000237186 INSCQ1MX18 579 aa16.59■□□□□ 0.25
UBE3D-201ENST00000237186 DCLRE1AQ6PJP8 1040 aa16.59■□□□□ 0.25
UBE3D-201ENST00000237186 TMEM135Q86UB9 458 aa16.59■□□□□ 0.25
UBE3D-201ENST00000237186 UNC5BQ8IZJ1 945 aa16.59■□□□□ 0.25
UBE3D-201ENST00000237186 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.59■□□□□ 0.25
UBE3D-201ENST00000237186 ADAM32Q8TC27 787 aa16.59■□□□□ 0.25
UBE3D-201ENST00000237186 AGAP11Q8TF27 550 aa16.59■□□□□ 0.25
UBE3D-201ENST00000237186 PKMYT1Q99640 499 aa16.59■□□□□ 0.25
UBE3D-201ENST00000237186 EPAS1Q99814 870 aa16.59■□□□□ 0.25
UBE3D-201ENST00000237186 PAAF1Q9BRP4 392 aa16.59■□□□□ 0.25
UBE3D-201ENST00000237186 TBC1D10AQ9BXI6 508 aa16.59■□□□□ 0.25
UBE3D-201ENST00000237186 WDCPQ9H6R7 721 aa16.59■□□□□ 0.25
UBE3D-201ENST00000237186 EBF2Q9HAK2 575 aa16.59■□□□□ 0.25
UBE3D-201ENST00000237186 SYBUQ9NX95 663 aa16.59■□□□□ 0.25
UBE3D-201ENST00000237186 KLHL8Q9P2G9 620 aaPredicted RBP16.59■□□□□ 0.25
UBE3D-201ENST00000237186 A0A0U1RQF3 1178 aa16.59■□□□□ 0.25
UBE3D-201ENST00000237186 CASTOR2A6NHX0 329 aa16.59■□□□□ 0.25
UBE3D-201ENST00000237186 M0QZQ0 153 aa16.59■□□□□ 0.25
UBE3D-201ENST00000237186 KCNK1O00180 336 aa16.59■□□□□ 0.25
UBE3D-201ENST00000237186 CBX6O95503 412 aa16.59■□□□□ 0.25
UBE3D-201ENST00000237186 GSRP00390 522 aa16.59■□□□□ 0.25
UBE3D-201ENST00000237186 ALDOAP04075 364 aaKnown RBP16.59■□□□□ 0.25
UBE3D-201ENST00000237186 ATP5BP06576 529 aaKnown RBP16.59■□□□□ 0.25
UBE3D-201ENST00000237186 CTSHP09668 335 aa16.59■□□□□ 0.25
UBE3D-201ENST00000237186 EZRP15311 586 aaKnown RBP16.59■□□□□ 0.25
UBE3D-201ENST00000237186 SERPINB6P35237 376 aa16.59■□□□□ 0.25
UBE3D-201ENST00000237186 RABGGTBP53611 331 aa16.59■□□□□ 0.25
UBE3D-201ENST00000237186 CRADDP78560 199 aa16.59■□□□□ 0.25
UBE3D-201ENST00000237186 MFSD14CQ5VZR4 134 aa16.59■□□□□ 0.25
UBE3D-201ENST00000237186 CD300LGQ6UXG3 332 aa16.59■□□□□ 0.25
UBE3D-201ENST00000237186 CEP57Q86XR8 500 aa16.59■□□□□ 0.25
UBE3D-201ENST00000237186 KLHDC8BQ8IXV7 354 aa16.59■□□□□ 0.25
UBE3D-201ENST00000237186 NETO2Q8NC67 525 aa16.59■□□□□ 0.25
UBE3D-201ENST00000237186 SMC1BQ8NDV3 1235 aa16.59■□□□□ 0.25
UBE3D-201ENST00000237186 MYLPFQ96A32 169 aa16.59■□□□□ 0.25
UBE3D-201ENST00000237186 ISL2Q96A47 359 aa16.59■□□□□ 0.25
UBE3D-201ENST00000237186 PTCD3Q96EY7 689 aaKnown RBP16.59■□□□□ 0.25
UBE3D-201ENST00000237186 ZIC5Q96T25 663 aa16.59■□□□□ 0.25
UBE3D-201ENST00000237186 MECRQ9BV79 373 aa16.59■□□□□ 0.25
UBE3D-201ENST00000237186 CEP41Q9BYV8 373 aa16.59■□□□□ 0.25
UBE3D-201ENST00000237186 OSBPL2Q9H1P3 480 aa16.59■□□□□ 0.25
UBE3D-201ENST00000237186 LRRC40Q9H9A6 602 aa16.59■□□□□ 0.25
UBE3D-201ENST00000237186 CASS4Q9NQ75 786 aa16.59■□□□□ 0.25
UBE3D-201ENST00000237186 XPNPEP3Q9NQH7 507 aa16.59■□□□□ 0.25
UBE3D-201ENST00000237186 DCDC2Q9UHG0 476 aa16.59■□□□□ 0.25
UBE3D-201ENST00000237186 DSEQ9UL01 958 aa16.59■□□□□ 0.25
UBE3D-201ENST00000237186 PADI3Q9ULW8 664 aa16.59■□□□□ 0.25
UBE3D-201ENST00000237186 SCN10AQ9Y5Y9 1956 aa16.58■□□□□ 0.24
UBE3D-201ENST00000237186 COL4A4P53420 1690 aaPredicted RBP16.58■□□□□ 0.24
UBE3D-201ENST00000237186 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.58■□□□□ 0.24
UBE3D-201ENST00000237186 MAGEB16A2A368 324 aa16.58■□□□□ 0.24
UBE3D-201ENST00000237186 HAUS5O94927 633 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms