RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.13■□□□□ 0.97
SNX3-201ENST00000230085 MARK2Q7KZI7 788 aaKnown RBP21.13■□□□□ 0.97
SNX3-201ENST00000230085 TFAP2BQ92481 460 aa21.13■□□□□ 0.97
SNX3-201ENST00000230085 MCRS1Q96EZ8 462 aa21.13■□□□□ 0.97
SNX3-201ENST00000230085 BTBD9Q96Q07 612 aa21.13■□□□□ 0.97
SNX3-201ENST00000230085 ACO2Q99798 780 aaKnown RBP21.13■□□□□ 0.97
SNX3-201ENST00000230085 MRPL4Q9BYD3 311 aaKnown RBP21.13■□□□□ 0.97
SNX3-201ENST00000230085 TSPYL2Q9H2G4 693 aaPredicted RBP21.13■□□□□ 0.97
SNX3-201ENST00000230085 ALG13Q9NP73 1137 aaKnown RBP21.13■□□□□ 0.97
SNX3-201ENST00000230085 CXXC1Q9P0U4 656 aaPredicted RBP21.13■□□□□ 0.97
SNX3-201ENST00000230085 SAE1Q9UBE0 346 aaPredicted RBP21.13■□□□□ 0.97
SNX3-201ENST00000230085 SMIM31A0A1B0GVY4 71 aa21.13■□□□□ 0.97
SNX3-201ENST00000230085 ABHD14A-ACY1A0A1B0GW23 586 aa21.13■□□□□ 0.97
SNX3-201ENST00000230085 FAM159BA6NKW6 160 aa21.13■□□□□ 0.97
SNX3-201ENST00000230085 TRUB2O95900 331 aaKnown RBP21.13■□□□□ 0.97
SNX3-201ENST00000230085 PENKP01210 267 aaPredicted RBP21.13■□□□□ 0.97
SNX3-201ENST00000230085 ENO1P06733 434 aaKnown RBP21.13■□□□□ 0.97
SNX3-201ENST00000230085 ALOX15P16050 662 aaPredicted RBP21.13■□□□□ 0.97
SNX3-201ENST00000230085 AXLP30530 894 aa21.13■□□□□ 0.97
SNX3-201ENST00000230085 IRX4P78413 519 aa21.13■□□□□ 0.97
SNX3-201ENST00000230085 TUBB3Q13509 450 aa21.13■□□□□ 0.97
SNX3-201ENST00000230085 SHHQ15465 462 aa21.13■□□□□ 0.97
SNX3-201ENST00000230085 CNPY1Q3B7I2 92 aa21.13■□□□□ 0.97
SNX3-201ENST00000230085 RABGAP1LQ5R372 815 aa21.13■□□□□ 0.97
SNX3-201ENST00000230085 NOTUMQ6P988 496 aa21.13■□□□□ 0.97
SNX3-201ENST00000230085 DHDDSQ86SQ9 333 aa21.13■□□□□ 0.97
SNX3-201ENST00000230085 PRPF39Q86UA1 669 aaKnown RBP21.13■□□□□ 0.97
SNX3-201ENST00000230085 CCNJLQ8IV13 435 aa21.13■□□□□ 0.97
SNX3-201ENST00000230085 ARID3BQ8IVW6 561 aaPredicted RBP21.13■□□□□ 0.97
SNX3-201ENST00000230085 ST13P4Q8IZP2 240 aaPredicted RBP21.13■□□□□ 0.97
SNX3-201ENST00000230085 SPATA18Q8TC71 538 aa21.13■□□□□ 0.97
SNX3-201ENST00000230085 ACSF2Q96CM8 615 aaPredicted RBP21.13■□□□□ 0.97
SNX3-201ENST00000230085 SDCBP2Q9H190 292 aa21.13■□□□□ 0.97
SNX3-201ENST00000230085 USP29Q9HBJ7 922 aa21.13■□□□□ 0.97
SNX3-201ENST00000230085 RGS18Q9NS28 235 aa21.13■□□□□ 0.97
SNX3-201ENST00000230085 YWHAGP61981 247 aaKnown RBP eCLIP21.12■□□□□ 0.97
SNX3-201ENST00000230085 ASPHQ12797 758 aa21.12■□□□□ 0.97
SNX3-201ENST00000230085 ZBTB41Q5SVQ8 909 aa21.12■□□□□ 0.97
SNX3-201ENST00000230085 ATF7IP2Q5U623 682 aa21.12■□□□□ 0.97
SNX3-201ENST00000230085 XYLT1Q86Y38 959 aa21.12■□□□□ 0.97
SNX3-201ENST00000230085 RFX6Q8HWS3 928 aa21.12■□□□□ 0.97
SNX3-201ENST00000230085 NUDCD3Q8IVD9 361 aa21.12■□□□□ 0.97
SNX3-201ENST00000230085 JOSD2Q8TAC2 188 aa21.12■□□□□ 0.97
SNX3-201ENST00000230085 ZBTB45Q96K62 511 aaPredicted RBP21.12■□□□□ 0.97
SNX3-201ENST00000230085 FAM124BQ9H5Z6 455 aaPredicted RBP21.12■□□□□ 0.97
SNX3-201ENST00000230085 PLAC1Q9HBJ0 212 aa21.12■□□□□ 0.97
SNX3-201ENST00000230085 BCLAF3A2AJT9 711 aaKnown RBP21.11■□□□□ 0.97
SNX3-201ENST00000230085 ZBBXA8MT70 800 aa21.11■□□□□ 0.97
SNX3-201ENST00000230085 BAIAP3O94812 1187 aa21.11■□□□□ 0.97
SNX3-201ENST00000230085 APOEP02649 317 aa21.11■□□□□ 0.97
SNX3-201ENST00000230085 PRDX6P30041 224 aa21.11■□□□□ 0.97
SNX3-201ENST00000230085 POLE2P56282 527 aa21.11■□□□□ 0.97
SNX3-201ENST00000230085 DYNLT1P63172 113 aa21.11■□□□□ 0.97
SNX3-201ENST00000230085 LSAMPQ13449 338 aa21.11■□□□□ 0.97
SNX3-201ENST00000230085 ITGA9Q13797 1035 aa21.11■□□□□ 0.97
SNX3-201ENST00000230085 CHI3L2Q15782 390 aa21.11■□□□□ 0.97
SNX3-201ENST00000230085 EFHC1Q5JVL4 640 aa21.11■□□□□ 0.97
SNX3-201ENST00000230085 C1orf146Q5VVC0 180 aa21.11■□□□□ 0.97
SNX3-201ENST00000230085 CES4AQ5XG92 561 aa21.11■□□□□ 0.97
SNX3-201ENST00000230085 EEF1DP3Q658K8 133 aa21.11■□□□□ 0.97
SNX3-201ENST00000230085 KCTD6Q8NC69 237 aa21.11■□□□□ 0.97
SNX3-201ENST00000230085 OR6Y1Q8NGX8 325 aa21.11■□□□□ 0.97
SNX3-201ENST00000230085 FBXO27Q8NI29 283 aa21.11■□□□□ 0.97
SNX3-201ENST00000230085 HERVK_113Q902F9 699 aa21.11■□□□□ 0.97
SNX3-201ENST00000230085 ACAP3Q96P50 834 aa21.11■□□□□ 0.97
SNX3-201ENST00000230085 TUBGCP5Q96RT8 1024 aa21.11■□□□□ 0.97
SNX3-201ENST00000230085 EIF2AQ9BY44 585 aaKnown RBP21.11■□□□□ 0.97
SNX3-201ENST00000230085 PDZD7Q9H5P4 517 aa21.11■□□□□ 0.97
SNX3-201ENST00000230085 PCMTD2Q9NV79 361 aa21.11■□□□□ 0.97
SNX3-201ENST00000230085 CST3P01034 146 aaPredicted RBP21.1■□□□□ 0.97
SNX3-201ENST00000230085 TGM2P21980 687 aa21.1■□□□□ 0.97
SNX3-201ENST00000230085 SSTR3P32745 418 aaPredicted RBP21.1■□□□□ 0.97
SNX3-201ENST00000230085 ASPAP45381 313 aa21.1■□□□□ 0.97
SNX3-201ENST00000230085 AQP5P55064 265 aa21.1■□□□□ 0.97
SNX3-201ENST00000230085 WDR5P61964 334 aaKnown RBP21.1■□□□□ 0.97
SNX3-201ENST00000230085 DUOXA2Q1HG44 320 aa21.1■□□□□ 0.97
SNX3-201ENST00000230085 UBXN11Q5T124 520 aa21.1■□□□□ 0.97
SNX3-201ENST00000230085 SLC24A5Q71RS6 500 aa21.1■□□□□ 0.97
SNX3-201ENST00000230085 ALDH16A1Q8IZ83 802 aa21.1■□□□□ 0.97
SNX3-201ENST00000230085 THTPAQ9BU02 230 aa21.1■□□□□ 0.97
SNX3-201ENST00000230085 XYLT2Q9H1B5 865 aa21.1■□□□□ 0.97
SNX3-201ENST00000230085 ZWILCHQ9H900 591 aa21.1■□□□□ 0.97
SNX3-201ENST00000230085 PTPRHQ9HD43 1115 aa21.1■□□□□ 0.97
SNX3-201ENST00000230085 ASNSD1Q9NWL6 643 aa21.1■□□□□ 0.97
SNX3-201ENST00000230085 PPM1HQ9ULR3 514 aa21.1■□□□□ 0.97
SNX3-201ENST00000230085 TNFSF13BQ9Y275 285 aa21.1■□□□□ 0.97
SNX3-201ENST00000230085 TTC3P53804 2025 aa21.1■□□□□ 0.97
SNX3-201ENST00000230085 C9IYK1 514 aa21.1■□□□□ 0.97
SNX3-201ENST00000230085 ATP9BO43861 1147 aa21.1■□□□□ 0.97
SNX3-201ENST00000230085 UQCRBP14927 111 aa21.1■□□□□ 0.97
SNX3-201ENST00000230085 TPSB2P20231 275 aa21.1■□□□□ 0.97
SNX3-201ENST00000230085 MIPP30301 263 aa21.1■□□□□ 0.97
SNX3-201ENST00000230085 DEFB103AP81534 67 aa21.1■□□□□ 0.97
SNX3-201ENST00000230085 TPSAB1Q15661 275 aa21.1■□□□□ 0.97
SNX3-201ENST00000230085 CYP4A22Q5TCH4 519 aa21.1■□□□□ 0.97
SNX3-201ENST00000230085 DENND1BQ6P3S1 775 aa21.1■□□□□ 0.97
SNX3-201ENST00000230085 SLC27A1Q6PCB7 646 aa21.1■□□□□ 0.97
SNX3-201ENST00000230085 CHRDL2Q6WN34 429 aa21.1■□□□□ 0.97
SNX3-201ENST00000230085 TMCO2Q7Z6W1 182 aaPredicted RBP21.1■□□□□ 0.97
SNX3-201ENST00000230085 TMEM126BQ8IUX1 230 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms