RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 TMPRSS4Q9NRS4 437 aa16.71■□□□□ 0.27
LTBR-201ENST00000228918 DNAJB4Q9UDY4 337 aa16.71■□□□□ 0.27
LTBR-201ENST00000228918 APOBEC2Q9Y235 224 aaKnown RBP16.71■□□□□ 0.27
LTBR-201ENST00000228918 A0A088AWK7 358 aa16.7■□□□□ 0.26
LTBR-201ENST00000228918 KPNA7A9QM74 516 aa16.7■□□□□ 0.26
LTBR-201ENST00000228918 XPO1O14980 1071 aaKnown RBP16.7■□□□□ 0.26
LTBR-201ENST00000228918 AP1G2O75843 785 aa16.7■□□□□ 0.26
LTBR-201ENST00000228918 KLHL2O95198 593 aa16.7■□□□□ 0.26
LTBR-201ENST00000228918 ALOX15P16050 662 aaPredicted RBP16.7■□□□□ 0.26
LTBR-201ENST00000228918 GRK2P25098 689 aa16.7■□□□□ 0.26
LTBR-201ENST00000228918 GP5P40197 560 aa16.7■□□□□ 0.26
LTBR-201ENST00000228918 ADIGQ0VDE8 80 aa16.7■□□□□ 0.26
LTBR-201ENST00000228918 PDK1Q15118 436 aa16.7■□□□□ 0.26
LTBR-201ENST00000228918 ZNF567Q8N184 647 aa16.7■□□□□ 0.26
LTBR-201ENST00000228918 NLGN2Q8NFZ4 835 aa16.7■□□□□ 0.26
LTBR-201ENST00000228918 NDRG1Q92597 394 aaKnown RBP16.7■□□□□ 0.26
LTBR-201ENST00000228918 FAM149B1Q96BN6 582 aa16.7■□□□□ 0.26
LTBR-201ENST00000228918 PGBD4Q96DM1 585 aa16.7■□□□□ 0.26
LTBR-201ENST00000228918 FERMT1Q9BQL6 677 aa16.7■□□□□ 0.26
LTBR-201ENST00000228918 SNX25Q9H3E2 840 aa16.7■□□□□ 0.26
LTBR-201ENST00000228918 PRDM12Q9H4Q4 367 aa16.7■□□□□ 0.26
LTBR-201ENST00000228918 DNAJC28Q9NX36 388 aa16.7■□□□□ 0.26
LTBR-201ENST00000228918 GDAP2Q9NXN4 497 aa16.7■□□□□ 0.26
LTBR-201ENST00000228918 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.7■□□□□ 0.26
LTBR-201ENST00000228918 IL1RAPL1Q9NZN1 696 aa16.7■□□□□ 0.26
LTBR-201ENST00000228918 TMEM216Q9P0N5 145 aa16.7■□□□□ 0.26
LTBR-201ENST00000228918 SEPT10Q9P0V9 454 aa16.7■□□□□ 0.26
LTBR-201ENST00000228918 IGSF9Q9P2J2 1179 aa16.7■□□□□ 0.26
LTBR-201ENST00000228918 COPG2Q9UBF2 871 aa16.7■□□□□ 0.26
LTBR-201ENST00000228918 TSC2P49815 1807 aa16.7■□□□□ 0.26
LTBR-201ENST00000228918 SIN3BO75182 1162 aa16.7■□□□□ 0.26
LTBR-201ENST00000228918 ARRB2P32121 409 aa16.7■□□□□ 0.26
LTBR-201ENST00000228918 RAB27AP51159 221 aa16.7■□□□□ 0.26
LTBR-201ENST00000228918 AP2B1P63010 937 aa16.7■□□□□ 0.26
LTBR-201ENST00000228918 TTLL12Q14166 644 aaPredicted RBP16.7■□□□□ 0.26
LTBR-201ENST00000228918 SMAD1Q15797 465 aaKnown RBP16.7■□□□□ 0.26
LTBR-201ENST00000228918 PPM1JQ5JR12 505 aa16.7■□□□□ 0.26
LTBR-201ENST00000228918 BNIPLQ7Z465 357 aa16.7■□□□□ 0.26
LTBR-201ENST00000228918 PIGZQ86VD9 579 aa16.7■□□□□ 0.26
LTBR-201ENST00000228918 PPP4R1Q8TF05 950 aa16.7■□□□□ 0.26
LTBR-201ENST00000228918 CERS2Q96G23 380 aa16.7■□□□□ 0.26
LTBR-201ENST00000228918 ZNF560Q96MR9 790 aa16.7■□□□□ 0.26
LTBR-201ENST00000228918 SGIP1Q9BQI5 828 aa16.7■□□□□ 0.26
LTBR-201ENST00000228918 FAM49AQ9H0Q0 323 aaPredicted RBP16.7■□□□□ 0.26
LTBR-201ENST00000228918 VCXQ9H320 206 aa16.7■□□□□ 0.26
LTBR-201ENST00000228918 FAM96AQ9H5X1 160 aa16.7■□□□□ 0.26
LTBR-201ENST00000228918 PNPOQ9NVS9 261 aa16.7■□□□□ 0.26
LTBR-201ENST00000228918 DLGAP2Q9P1A6 1054 aa16.7■□□□□ 0.26
LTBR-201ENST00000228918 POLBP06746 335 aa16.69■□□□□ 0.26
LTBR-201ENST00000228918 MMP3P08254 477 aa16.69■□□□□ 0.26
LTBR-201ENST00000228918 ERVK-10P10266 1014 aa16.69■□□□□ 0.26
LTBR-201ENST00000228918 HOXD8P13378 290 aaPredicted RBP16.69■□□□□ 0.26
LTBR-201ENST00000228918 MAGEA12P43365 314 aa16.69■□□□□ 0.26
LTBR-201ENST00000228918 HIC1Q14526 733 aa16.69■□□□□ 0.26
LTBR-201ENST00000228918 PAFAH1B3Q15102 231 aaKnown RBP16.69■□□□□ 0.26
LTBR-201ENST00000228918 DCAF6Q58WW2 860 aa16.69■□□□□ 0.26
LTBR-201ENST00000228918 SPANXN3Q5MJ09 141 aa16.69■□□□□ 0.26
LTBR-201ENST00000228918 TMCO4Q5TGY1 634 aa16.69■□□□□ 0.26
LTBR-201ENST00000228918 DPY19L2Q6NUT2 758 aa16.69■□□□□ 0.26
LTBR-201ENST00000228918 SLC30A9Q6PML9 568 aa16.69■□□□□ 0.26
LTBR-201ENST00000228918 NT5C3BQ969T7 300 aa16.69■□□□□ 0.26
LTBR-201ENST00000228918 ISL2Q96A47 359 aa16.69■□□□□ 0.26
LTBR-201ENST00000228918 CPNE1Q99829 537 aa16.69■□□□□ 0.26
LTBR-201ENST00000228918 CDHR5Q9HBB8 845 aa16.69■□□□□ 0.26
LTBR-201ENST00000228918 SETD4Q9NVD3 440 aa16.69■□□□□ 0.26
LTBR-201ENST00000228918 NDE1Q9NXR1 346 aa16.69■□□□□ 0.26
LTBR-201ENST00000228918 TXNDC16Q9P2K2 825 aa16.69■□□□□ 0.26
LTBR-201ENST00000228918 RPS6KL1Q9Y6S9 549 aa16.69■□□□□ 0.26
LTBR-201ENST00000228918 ZNF195O14628 629 aa16.68■□□□□ 0.26
LTBR-201ENST00000228918 GPR32O75388 356 aa16.68■□□□□ 0.26
LTBR-201ENST00000228918 CD4P01730 458 aa16.68■□□□□ 0.26
LTBR-201ENST00000228918 AKAP5P24588 427 aa16.68■□□□□ 0.26
LTBR-201ENST00000228918 TYK2P29597 1187 aa16.68■□□□□ 0.26
LTBR-201ENST00000228918 MLH1P40692 756 aa16.68■□□□□ 0.26
LTBR-201ENST00000228918 GARSP41250 739 aaKnown RBP16.68■□□□□ 0.26
LTBR-201ENST00000228918 HARS2P49590 506 aaKnown RBP16.68■□□□□ 0.26
LTBR-201ENST00000228918 IDH3AP50213 366 aa16.68■□□□□ 0.26
LTBR-201ENST00000228918 ERFP50548 548 aa16.68■□□□□ 0.26
LTBR-201ENST00000228918 SLC25A3Q00325 362 aa16.68■□□□□ 0.26
LTBR-201ENST00000228918 DPYSQ14117 519 aa16.68■□□□□ 0.26
LTBR-201ENST00000228918 CES3Q6UWW8 571 aa16.68■□□□□ 0.26
LTBR-201ENST00000228918 LIMS2Q7Z4I7 341 aa16.68■□□□□ 0.26
LTBR-201ENST00000228918 CCNYQ8ND76 341 aa16.68■□□□□ 0.26
LTBR-201ENST00000228918 SHKBP1Q8TBC3 707 aa16.68■□□□□ 0.26
LTBR-201ENST00000228918 CDCA5Q96FF9 252 aa16.68■□□□□ 0.26
LTBR-201ENST00000228918 NPY6RQ99463 290 aa16.68■□□□□ 0.26
LTBR-201ENST00000228918 OSMRQ99650 979 aa16.68■□□□□ 0.26
LTBR-201ENST00000228918 SNX15Q9NRS6 342 aa16.68■□□□□ 0.26
LTBR-201ENST00000228918 CREB3O43889 395 aa16.68■□□□□ 0.26
LTBR-201ENST00000228918 RALBP11234 206 aa16.68■□□□□ 0.26
LTBR-201ENST00000228918 MYL4P12829 197 aa16.68■□□□□ 0.26
LTBR-201ENST00000228918 GMPRP36959 345 aa16.68■□□□□ 0.26
LTBR-201ENST00000228918 COPAP53621 1224 aa16.68■□□□□ 0.26
LTBR-201ENST00000228918 ABCE1P61221 599 aaKnown RBP16.68■□□□□ 0.26
LTBR-201ENST00000228918 IFRD2Q12894 506 aaPredicted RBP16.68■□□□□ 0.26
LTBR-201ENST00000228918 GRTP1Q5TC63 336 aa16.68■□□□□ 0.26
LTBR-201ENST00000228918 OR52E8Q6IFG1 317 aa16.68■□□□□ 0.26
LTBR-201ENST00000228918 NME8Q8N427 588 aa16.68■□□□□ 0.26
LTBR-201ENST00000228918 SLC25A41Q8N5S1 370 aa16.68■□□□□ 0.26
LTBR-201ENST00000228918 POU5F2Q8N7G0 328 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms