RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 SERPINA6P08185 405 aa22.55■■□□□ 1.2
SMARCD2-201ENST00000225742 MYL3P08590 195 aa22.55■■□□□ 1.2
SMARCD2-201ENST00000225742 MX2P20592 715 aa22.55■■□□□ 1.2
SMARCD2-201ENST00000225742 RAP1GDS1P52306 607 aa22.55■■□□□ 1.2
SMARCD2-201ENST00000225742 NME3Q13232 169 aa22.55■■□□□ 1.2
SMARCD2-201ENST00000225742 PDE1CQ14123 709 aaPredicted RBP22.55■■□□□ 1.2
SMARCD2-201ENST00000225742 ARL13BQ3SXY8 428 aa22.55■■□□□ 1.2
SMARCD2-201ENST00000225742 PRAMEF19Q5SWL8 479 aa22.55■■□□□ 1.2
SMARCD2-201ENST00000225742 N4BP2L1Q5TBK1 243 aaPredicted RBP22.55■■□□□ 1.2
SMARCD2-201ENST00000225742 TWF2Q6IBS0 349 aaKnown RBP22.55■■□□□ 1.2
SMARCD2-201ENST00000225742 PID1Q7Z2X4 250 aa22.55■■□□□ 1.2
SMARCD2-201ENST00000225742 WDR75Q8IWA0 830 aaKnown RBP22.55■■□□□ 1.2
SMARCD2-201ENST00000225742 GPATCH11Q8N954 259 aa22.55■■□□□ 1.2
SMARCD2-201ENST00000225742 TTC8Q8TAM2 541 aa22.55■■□□□ 1.2
SMARCD2-201ENST00000225742 ISL2Q96A47 359 aa22.55■■□□□ 1.2
SMARCD2-201ENST00000225742 KRT82Q9NSB4 513 aa22.55■■□□□ 1.2
SMARCD2-201ENST00000225742 ZFATQ9P243 1243 aa22.55■■□□□ 1.2
SMARCD2-201ENST00000225742 STOML1Q9UBI4 398 aa22.55■■□□□ 1.2
SMARCD2-201ENST00000225742 FBXW11Q9UKB1 542 aa22.55■■□□□ 1.2
SMARCD2-201ENST00000225742 TRHDEQ9UKU6 1024 aa22.55■■□□□ 1.2
SMARCD2-201ENST00000225742 EMCNQ9ULC0 261 aa22.55■■□□□ 1.2
SMARCD2-201ENST00000225742 AP2A1O95782 977 aa22.54■■□□□ 1.2
SMARCD2-201ENST00000225742 GSRP00390 522 aa22.54■■□□□ 1.2
SMARCD2-201ENST00000225742 SERPINE1P05121 402 aa22.54■■□□□ 1.2
SMARCD2-201ENST00000225742 ACAT1P24752 427 aaKnown RBP22.54■■□□□ 1.2
SMARCD2-201ENST00000225742 NDUFV1P49821 464 aa22.54■■□□□ 1.2
SMARCD2-201ENST00000225742 PDE1BQ01064 536 aa22.54■■□□□ 1.2
SMARCD2-201ENST00000225742 PPIDQ08752 370 aaKnown RBP22.54■■□□□ 1.2
SMARCD2-201ENST00000225742 TAF11Q15544 211 aa22.54■■□□□ 1.2
SMARCD2-201ENST00000225742 RAB41Q5JT25 222 aa22.54■■□□□ 1.2
SMARCD2-201ENST00000225742 TAF2Q6P1X5 1199 aa22.54■■□□□ 1.2
SMARCD2-201ENST00000225742 TTC7BQ86TV6 843 aa22.54■■□□□ 1.2
SMARCD2-201ENST00000225742 SLC7A14Q8TBB6 771 aa22.54■■□□□ 1.2
SMARCD2-201ENST00000225742 CERS2Q96G23 380 aa22.54■■□□□ 1.2
SMARCD2-201ENST00000225742 ULBP1Q9BZM6 244 aa22.54■■□□□ 1.2
SMARCD2-201ENST00000225742 TSPYL2Q9H2G4 693 aaPredicted RBP22.54■■□□□ 1.2
SMARCD2-201ENST00000225742 DDX43Q9NXZ2 648 aaKnown RBP22.54■■□□□ 1.2
SMARCD2-201ENST00000225742 KLHL8Q9P2G9 620 aaPredicted RBP22.54■■□□□ 1.2
SMARCD2-201ENST00000225742 NR2E3Q9Y5X4 410 aa22.54■■□□□ 1.2
SMARCD2-201ENST00000225742 SYNJ2BP-COX16A0A087WUM0 186 aa22.54■■□□□ 1.2
SMARCD2-201ENST00000225742 MAGEB16A2A368 324 aa22.54■■□□□ 1.2
SMARCD2-201ENST00000225742 C2orf71A6NGG8 1288 aa22.54■■□□□ 1.2
SMARCD2-201ENST00000225742 LIN7AO14910 233 aaPredicted RBP22.54■■□□□ 1.2
SMARCD2-201ENST00000225742 ENTPD5O75356 428 aa22.54■■□□□ 1.2
SMARCD2-201ENST00000225742 FYNP06241 537 aa22.54■■□□□ 1.2
SMARCD2-201ENST00000225742 ERCC2P18074 760 aa22.54■■□□□ 1.2
SMARCD2-201ENST00000225742 PTPN3P26045 913 aa22.54■■□□□ 1.2
SMARCD2-201ENST00000225742 MAP3K7CLP57077 242 aa22.54■■□□□ 1.2
SMARCD2-201ENST00000225742 TPI1P60174 286 aa22.54■■□□□ 1.2
SMARCD2-201ENST00000225742 ITPRIPL1Q6GPH6 555 aa22.54■■□□□ 1.2
SMARCD2-201ENST00000225742 RFWD3Q6PCD5 774 aa22.54■■□□□ 1.2
SMARCD2-201ENST00000225742 UNC5BQ8IZJ1 945 aa22.54■■□□□ 1.2
SMARCD2-201ENST00000225742 SENP8Q96LD8 212 aa22.54■■□□□ 1.2
SMARCD2-201ENST00000225742 VAT1Q99536 393 aa22.54■■□□□ 1.2
SMARCD2-201ENST00000225742 SYT15Q9BQS2 421 aa22.54■■□□□ 1.2
SMARCD2-201ENST00000225742 CCDC106Q9BWC9 280 aa22.54■■□□□ 1.2
SMARCD2-201ENST00000225742 WDR6Q9NNW5 1121 aaKnown RBP22.54■■□□□ 1.2
SMARCD2-201ENST00000225742 CRTAC1Q9NQ79 661 aa22.54■■□□□ 1.2
SMARCD2-201ENST00000225742 BFARQ9NZS9 450 aa22.54■■□□□ 1.2
SMARCD2-201ENST00000225742 COX16Q9P0S2 106 aa22.54■■□□□ 1.2
SMARCD2-201ENST00000225742 CLEC11AQ9Y240 323 aa22.54■■□□□ 1.2
SMARCD2-201ENST00000225742 SPECC1L-ADORA2AF8WAN1 911 aa22.53■■□□□ 1.2
SMARCD2-201ENST00000225742 AP3B1O00203 1094 aa22.53■■□□□ 1.2
SMARCD2-201ENST00000225742 FGF3P11487 239 aaPredicted RBP22.53■■□□□ 1.2
SMARCD2-201ENST00000225742 MAGEA12P43365 314 aa22.53■■□□□ 1.2
SMARCD2-201ENST00000225742 CDK7P50613 346 aa22.53■■□□□ 1.2
SMARCD2-201ENST00000225742 CRADDP78560 199 aa22.53■■□□□ 1.2
SMARCD2-201ENST00000225742 CCDC153Q494R4 210 aa22.53■■□□□ 1.2
SMARCD2-201ENST00000225742 DNAL1Q4LDG9 190 aa22.53■■□□□ 1.2
SMARCD2-201ENST00000225742 FAM35AQ86V20 835 aa22.53■■□□□ 1.2
SMARCD2-201ENST00000225742 PIWIL2Q8TC59 973 aaKnown RBP22.53■■□□□ 1.2
SMARCD2-201ENST00000225742 CASS4Q9NQ75 786 aa22.53■■□□□ 1.2
SMARCD2-201ENST00000225742 CDH9Q9ULB4 789 aa22.53■■□□□ 1.2
SMARCD2-201ENST00000225742 RPS6KL1Q9Y6S9 549 aa22.53■■□□□ 1.2
SMARCD2-201ENST00000225742 TRIP12Q14669 1992 aaPredicted RBP22.53■■□□□ 1.2
SMARCD2-201ENST00000225742 B2RBV5 119 aa22.52■■□□□ 1.2
SMARCD2-201ENST00000225742 NRP1O14786 923 aa22.52■■□□□ 1.2
SMARCD2-201ENST00000225742 AP1G2O75843 785 aa22.52■■□□□ 1.2
SMARCD2-201ENST00000225742 PROCP04070 461 aa22.52■■□□□ 1.2
SMARCD2-201ENST00000225742 SPRP35270 261 aaPredicted RBP22.52■■□□□ 1.2
SMARCD2-201ENST00000225742 PGM1P36871 562 aa22.52■■□□□ 1.2
SMARCD2-201ENST00000225742 SLC1A6P48664 564 aa22.52■■□□□ 1.2
SMARCD2-201ENST00000225742 NPY2RP49146 381 aa22.52■■□□□ 1.2
SMARCD2-201ENST00000225742 TEDDM1Q5T9Z0 273 aa22.52■■□□□ 1.2
SMARCD2-201ENST00000225742 HFE2Q6ZVN8 426 aa22.52■■□□□ 1.2
SMARCD2-201ENST00000225742 KCNV2Q8TDN2 545 aa22.52■■□□□ 1.2
SMARCD2-201ENST00000225742 HDAC11Q96DB2 347 aa22.52■■□□□ 1.2
SMARCD2-201ENST00000225742 NAF1Q96HR8 494 aaKnown RBP22.52■■□□□ 1.2
SMARCD2-201ENST00000225742 PTPN18Q99952 460 aa22.52■■□□□ 1.2
SMARCD2-201ENST00000225742 C1orf21Q9H246 121 aa22.52■■□□□ 1.2
SMARCD2-201ENST00000225742 TMPRSS4Q9NRS4 437 aa22.52■■□□□ 1.2
SMARCD2-201ENST00000225742 F8W8V4 182 aa22.52■■□□□ 1.2
SMARCD2-201ENST00000225742 PSMD3O43242 534 aa22.52■■□□□ 1.2
SMARCD2-201ENST00000225742 USP1O94782 785 aa22.52■■□□□ 1.2
SMARCD2-201ENST00000225742 MYL4P12829 197 aa22.52■■□□□ 1.2
SMARCD2-201ENST00000225742 DNAJB2P25686 324 aa22.52■■□□□ 1.2
SMARCD2-201ENST00000225742 TSNAXIP1Q2TAA8 658 aa22.52■■□□□ 1.2
SMARCD2-201ENST00000225742 KHDC1Q4VXA5 237 aaKnown RBP22.52■■□□□ 1.2
SMARCD2-201ENST00000225742 KIAA0319Q5VV43 1072 aa22.52■■□□□ 1.2
SMARCD2-201ENST00000225742 DSTYKQ6XUX3 929 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms