RNA–Protein interactions for RNA: ENST00000225655.5

PFN1-201, Transcript of profilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-201ENST00000225655 PCDH15Q96QU1 1955 aa18.68■□□□□ 0.58
PFN1-201ENST00000225655 ASCC3Q8N3C0 2202 aaKnown RBP18.68■□□□□ 0.58
PFN1-201ENST00000225655 SART1O43290 800 aaKnown RBP18.68■□□□□ 0.58
PFN1-201ENST00000225655 TSPAN3O60637 253 aa18.68■□□□□ 0.58
PFN1-201ENST00000225655 NDUFS2O75306 463 aa18.68■□□□□ 0.58
PFN1-201ENST00000225655 SERPING1P05155 500 aa18.68■□□□□ 0.58
PFN1-201ENST00000225655 CFIP05156 583 aa18.68■□□□□ 0.58
PFN1-201ENST00000225655 MMEP08473 750 aa18.68■□□□□ 0.58
PFN1-201ENST00000225655 TNFAIP3P21580 790 aa18.68■□□□□ 0.58
PFN1-201ENST00000225655 HLA-FP30511 346 aa18.68■□□□□ 0.58
PFN1-201ENST00000225655 PRKCIP41743 596 aa18.68■□□□□ 0.58
PFN1-201ENST00000225655 GPD2P43304 727 aa18.68■□□□□ 0.58
PFN1-201ENST00000225655 RPL34P49207 117 aaKnown RBP18.68■□□□□ 0.58
PFN1-201ENST00000225655 RING1Q06587 406 aa18.68■□□□□ 0.58
PFN1-201ENST00000225655 MPP7Q5T2T1 576 aa18.68■□□□□ 0.58
PFN1-201ENST00000225655 SH3PXD2AQ5TCZ1 1133 aa18.68■□□□□ 0.58
PFN1-201ENST00000225655 NUGGCQ68CJ6 796 aa18.68■□□□□ 0.58
PFN1-201ENST00000225655 IRF2BP2Q7Z5L9 587 aa18.68■□□□□ 0.58
PFN1-201ENST00000225655 UNC45BQ8IWX7 931 aa18.68■□□□□ 0.58
PFN1-201ENST00000225655 WFIKKN2Q8TEU8 576 aa18.68■□□□□ 0.58
PFN1-201ENST00000225655 CLEC4CQ8WTT0 213 aa18.68■□□□□ 0.58
PFN1-201ENST00000225655 SORCS1Q8WY21 1168 aa18.68■□□□□ 0.58
PFN1-201ENST00000225655 FOXJ1Q92949 421 aa18.68■□□□□ 0.58
PFN1-201ENST00000225655 HSPA12BQ96MM6 686 aa18.68■□□□□ 0.58
PFN1-201ENST00000225655 MKRN2Q9H000 416 aaKnown RBP18.68■□□□□ 0.58
PFN1-201ENST00000225655 CAPN10Q9HC96 672 aa18.68■□□□□ 0.58
PFN1-201ENST00000225655 ITM2CQ9NQX7 267 aa18.68■□□□□ 0.58
PFN1-201ENST00000225655 USP36Q9P275 1121 aaKnown RBP18.68■□□□□ 0.58
PFN1-201ENST00000225655 IMPACTQ9P2X3 320 aa18.68■□□□□ 0.58
PFN1-201ENST00000225655 ADAMTS9Q9P2N4 1935 aa18.67■□□□□ 0.58
PFN1-201ENST00000225655 GIPC1O14908 333 aa18.67■□□□□ 0.58
PFN1-201ENST00000225655 IRAK2O43187 625 aa18.67■□□□□ 0.58
PFN1-201ENST00000225655 NCAM1P13591 858 aa18.67■□□□□ 0.58
PFN1-201ENST00000225655 CEACAM1P13688 526 aa18.67■□□□□ 0.58
PFN1-201ENST00000225655 PRKCHP24723 683 aa18.67■□□□□ 0.58
PFN1-201ENST00000225655 CD6P30203 668 aa18.67■□□□□ 0.58
PFN1-201ENST00000225655 MAPK8P45983 427 aa18.67■□□□□ 0.58
PFN1-201ENST00000225655 NSFP46459 744 aaKnown RBP18.67■□□□□ 0.58
PFN1-201ENST00000225655 SLC11A2P49281 568 aa18.67■□□□□ 0.58
PFN1-201ENST00000225655 GFPT1Q06210 699 aaPredicted RBP18.67■□□□□ 0.58
PFN1-201ENST00000225655 PDCLQ13371 301 aa18.67■□□□□ 0.58
PFN1-201ENST00000225655 UAP1L1Q3KQV9 507 aa18.67■□□□□ 0.58
PFN1-201ENST00000225655 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.67■□□□□ 0.58
PFN1-201ENST00000225655 C1orf131Q8NDD1 294 aaKnown RBP18.67■□□□□ 0.58
PFN1-201ENST00000225655 SLC20A1Q8WUM9 679 aa18.67■□□□□ 0.58
PFN1-201ENST00000225655 AZIN2Q96A70 460 aa18.67■□□□□ 0.58
PFN1-201ENST00000225655 DNAJC7Q99615 494 aa18.67■□□□□ 0.58
PFN1-201ENST00000225655 TRIM62Q9BVG3 475 aa18.67■□□□□ 0.58
PFN1-201ENST00000225655 HAUS4Q9H6D7 363 aa18.67■□□□□ 0.58
PFN1-201ENST00000225655 ABHD10Q9NUJ1 306 aa18.67■□□□□ 0.58
PFN1-201ENST00000225655 MUC22E2RYF6 1773 aaPredicted RBP18.67■□□□□ 0.58
PFN1-201ENST00000225655 IGLV3-19P01714 112 aa18.66■□□□□ 0.58
PFN1-201ENST00000225655 FYNP06241 537 aa18.66■□□□□ 0.58
PFN1-201ENST00000225655 TBX4P57082 545 aa18.66■□□□□ 0.58
PFN1-201ENST00000225655 TBX2Q13207 712 aaPredicted RBP18.66■□□□□ 0.58
PFN1-201ENST00000225655 GSE1Q14687 1217 aa18.66■□□□□ 0.58
PFN1-201ENST00000225655 FAM133BQ5BKY9 247 aaKnown RBP18.66■□□□□ 0.58
PFN1-201ENST00000225655 SYCP2LQ5T4T6 812 aa18.66■□□□□ 0.58
PFN1-201ENST00000225655 PIK3R6Q5UE93 754 aa18.66■□□□□ 0.58
PFN1-201ENST00000225655 SERPINA13PQ6UXR4 307 aa18.66■□□□□ 0.58
PFN1-201ENST00000225655 KIAA0907Q7Z7F0 614 aaPredicted RBP18.66■□□□□ 0.58
PFN1-201ENST00000225655 ADIPOR2Q86V24 386 aa18.66■□□□□ 0.58
PFN1-201ENST00000225655 TMPRSS6Q8IU80 811 aa18.66■□□□□ 0.58
PFN1-201ENST00000225655 SCUBE3Q8IX30 993 aa18.66■□□□□ 0.58
PFN1-201ENST00000225655 AHI1Q8N157 1196 aa18.66■□□□□ 0.58
PFN1-201ENST00000225655 PRCCQ92733 491 aaPredicted RBP18.66■□□□□ 0.58
PFN1-201ENST00000225655 PPP1R13BQ96KQ4 1090 aa18.66■□□□□ 0.58
PFN1-201ENST00000225655 DEF6Q9H4E7 631 aa18.66■□□□□ 0.58
PFN1-201ENST00000225655 GGA2Q9UJY4 613 aa18.66■□□□□ 0.58
PFN1-201ENST00000225655 EPHX1P07099 455 aa18.65■□□□□ 0.58
PFN1-201ENST00000225655 C7P10643 843 aa18.65■□□□□ 0.58
PFN1-201ENST00000225655 OXTRP30559 389 aa18.65■□□□□ 0.58
PFN1-201ENST00000225655 HNRNPH3P31942 346 aaKnown RBP18.65■□□□□ 0.58
PFN1-201ENST00000225655 CDH5P33151 784 aaPredicted RBP18.65■□□□□ 0.58
PFN1-201ENST00000225655 TPMTP51580 245 aa18.65■□□□□ 0.58
PFN1-201ENST00000225655 SGSHP51688 502 aa18.65■□□□□ 0.58
PFN1-201ENST00000225655 COPAP53621 1224 aa18.65■□□□□ 0.58
PFN1-201ENST00000225655 ADKP55263 362 aaKnown RBP18.65■□□□□ 0.58
PFN1-201ENST00000225655 FMO1Q01740 532 aa18.65■□□□□ 0.58
PFN1-201ENST00000225655 NNTQ13423 1086 aa18.65■□□□□ 0.58
PFN1-201ENST00000225655 NAA35Q5VZE5 725 aa18.65■□□□□ 0.58
PFN1-201ENST00000225655 RFWD3Q6PCD5 774 aa18.65■□□□□ 0.58
PFN1-201ENST00000225655 CHST9Q7L1S5 443 aa18.65■□□□□ 0.58
PFN1-201ENST00000225655 BEND5Q7L4P6 421 aa18.65■□□□□ 0.58
PFN1-201ENST00000225655 ERICH1Q86X53 443 aa18.65■□□□□ 0.58
PFN1-201ENST00000225655 ZNF557Q8N988 423 aaPredicted RBP18.65■□□□□ 0.58
PFN1-201ENST00000225655 SIPA1Q96FS4 1042 aa18.65■□□□□ 0.58
PFN1-201ENST00000225655 TOE1Q96GM8 510 aaKnown RBP18.65■□□□□ 0.58
PFN1-201ENST00000225655 SERPINB11Q96P15 392 aa18.65■□□□□ 0.58
PFN1-201ENST00000225655 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.65■□□□□ 0.58
PFN1-201ENST00000225655 SLC4A5Q9BY07 1137 aa18.65■□□□□ 0.58
PFN1-201ENST00000225655 TMEM245Q9H330 911 aa18.65■□□□□ 0.58
PFN1-201ENST00000225655 ABCB8Q9NUT2 735 aa18.65■□□□□ 0.58
PFN1-201ENST00000225655 WSB2Q9NYS7 404 aaPredicted RBP18.65■□□□□ 0.58
PFN1-201ENST00000225655 SUSD2Q9UGT4 822 aa18.65■□□□□ 0.58
PFN1-201ENST00000225655 PLA2G4CQ9UP65 541 aa18.65■□□□□ 0.58
PFN1-201ENST00000225655 TLR6Q9Y2C9 796 aa18.65■□□□□ 0.58
PFN1-201ENST00000225655 MAP1BP46821 2468 aaKnown RBP18.65■□□□□ 0.58
PFN1-201ENST00000225655 GOLGA6L7A0A1B0GV03 622 aa18.64■□□□□ 0.57
PFN1-201ENST00000225655 UPK3BL1B0FP48 263 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms