RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 PTPN3P26045 913 aa18.85■□□□□ 0.61
CLIP2-201ENST00000223398 SMAD3P84022 425 aaKnown RBP18.85■□□□□ 0.61
CLIP2-201ENST00000223398 CXorf40AQ8TE69 158 aa18.85■□□□□ 0.61
CLIP2-201ENST00000223398 MORC2Q9Y6X9 1032 aaPredicted RBP18.85■□□□□ 0.61
CLIP2-201ENST00000223398 GRIK3Q13003 919 aa18.85■□□□□ 0.61
CLIP2-201ENST00000223398 INSCQ1MX18 579 aa18.85■□□□□ 0.61
CLIP2-201ENST00000223398 NYAP1Q6ZVC0 841 aa18.85■□□□□ 0.61
CLIP2-201ENST00000223398 USP45Q70EL2 814 aa18.85■□□□□ 0.61
CLIP2-201ENST00000223398 C18orf25Q96B23 403 aaPredicted RBP18.85■□□□□ 0.61
CLIP2-201ENST00000223398 RMND5AQ9H871 391 aa18.85■□□□□ 0.61
CLIP2-201ENST00000223398 GIT1Q9Y2X7 761 aa18.85■□□□□ 0.61
CLIP2-201ENST00000223398 E9PBE3 544 aa18.85■□□□□ 0.61
CLIP2-201ENST00000223398 KLHL41O60662 606 aa18.85■□□□□ 0.61
CLIP2-201ENST00000223398 IL1BP01584 269 aa18.85■□□□□ 0.61
CLIP2-201ENST00000223398 NR2C2P49116 596 aa18.85■□□□□ 0.61
CLIP2-201ENST00000223398 TRIP10Q15642 601 aa18.85■□□□□ 0.61
CLIP2-201ENST00000223398 CNGA2Q16280 664 aa18.85■□□□□ 0.61
CLIP2-201ENST00000223398 IL17AQ16552 155 aa18.85■□□□□ 0.61
CLIP2-201ENST00000223398 RBM43Q6ZSC3 357 aaKnown RBP18.85■□□□□ 0.61
CLIP2-201ENST00000223398 NKX2-3Q8TAU0 364 aa18.85■□□□□ 0.61
CLIP2-201ENST00000223398 MAGEB16A2A368 324 aa18.84■□□□□ 0.61
CLIP2-201ENST00000223398 SERPINI2O75830 405 aa18.84■□□□□ 0.61
CLIP2-201ENST00000223398 RARAP10276 462 aa18.84■□□□□ 0.61
CLIP2-201ENST00000223398 BGNP21810 368 aa18.84■□□□□ 0.61
CLIP2-201ENST00000223398 COPAP53621 1224 aa18.84■□□□□ 0.61
CLIP2-201ENST00000223398 CREMQ03060 361 aa18.84■□□□□ 0.61
CLIP2-201ENST00000223398 TGM3Q08188 693 aa18.84■□□□□ 0.61
CLIP2-201ENST00000223398 SEL1L3Q68CR1 1132 aa18.84■□□□□ 0.61
CLIP2-201ENST00000223398 MAB21L3Q8N8X9 362 aa18.84■□□□□ 0.61
CLIP2-201ENST00000223398 PPP1R16AQ96I34 528 aa18.84■□□□□ 0.61
CLIP2-201ENST00000223398 EIF2AQ9BY44 585 aaKnown RBP18.84■□□□□ 0.61
CLIP2-201ENST00000223398 HEY2Q9UBP5 337 aa18.84■□□□□ 0.61
CLIP2-201ENST00000223398 GABRR2P28476 465 aa18.84■□□□□ 0.61
CLIP2-201ENST00000223398 CD86P42081 329 aa18.84■□□□□ 0.61
CLIP2-201ENST00000223398 PFKPQ01813 784 aa18.84■□□□□ 0.61
CLIP2-201ENST00000223398 C16orf87Q6PH81 154 aa18.84■□□□□ 0.61
CLIP2-201ENST00000223398 FAM124AQ86V42 546 aa18.84■□□□□ 0.61
CLIP2-201ENST00000223398 ETNPPLQ8TBG4 499 aa18.84■□□□□ 0.61
CLIP2-201ENST00000223398 CASP10Q92851 521 aa18.84■□□□□ 0.61
CLIP2-201ENST00000223398 PHF21AQ96BD5 680 aa18.84■□□□□ 0.61
CLIP2-201ENST00000223398 NSL1Q96IY1 281 aa18.84■□□□□ 0.61
CLIP2-201ENST00000223398 BBS2Q9BXC9 721 aa18.84■□□□□ 0.61
CLIP2-201ENST00000223398 BTBD7Q9P203 1132 aa18.84■□□□□ 0.61
CLIP2-201ENST00000223398 GLUD1P00367 558 aa18.84■□□□□ 0.61
CLIP2-201ENST00000223398 ABCG1P45844 678 aa18.84■□□□□ 0.61
CLIP2-201ENST00000223398 PLOD1Q02809 727 aaPredicted RBP18.84■□□□□ 0.61
CLIP2-201ENST00000223398 SETD3Q86TU7 594 aaPredicted RBP18.84■□□□□ 0.61
CLIP2-201ENST00000223398 TLE6Q9H808 572 aa18.84■□□□□ 0.61
CLIP2-201ENST00000223398 SH3BP4Q9P0V3 963 aa18.84■□□□□ 0.61
CLIP2-201ENST00000223398 ZMYM5Q9UJ78 669 aa18.84■□□□□ 0.61
CLIP2-201ENST00000223398 OR4Q2P0C623 313 aa18.84■□□□□ 0.61
CLIP2-201ENST00000223398 SSTR1P30872 391 aa18.84■□□□□ 0.61
CLIP2-201ENST00000223398 PPM1AP35813 382 aa18.84■□□□□ 0.61
CLIP2-201ENST00000223398 PAPD7Q5XG87 772 aaKnown RBP18.84■□□□□ 0.61
CLIP2-201ENST00000223398 TNIP2Q8NFZ5 429 aa18.84■□□□□ 0.61
CLIP2-201ENST00000223398 EXOC2Q96KP1 924 aa18.84■□□□□ 0.61
CLIP2-201ENST00000223398 PCDHA3Q9Y5H8 950 aa18.84■□□□□ 0.61
CLIP2-201ENST00000223398 TYMPP19971 482 aa18.84■□□□□ 0.61
CLIP2-201ENST00000223398 TARSP26639 723 aaKnown RBP18.84■□□□□ 0.61
CLIP2-201ENST00000223398 AADACL2Q6P093 401 aa18.84■□□□□ 0.61
CLIP2-201ENST00000223398 TTC7BQ86TV6 843 aa18.84■□□□□ 0.61
CLIP2-201ENST00000223398 EPS8L1Q8TE68 723 aa18.84■□□□□ 0.61
CLIP2-201ENST00000223398 C1QTNF7Q9BXJ2 289 aa18.84■□□□□ 0.61
CLIP2-201ENST00000223398 BPIFA1Q9NP55 256 aa18.84■□□□□ 0.61
CLIP2-201ENST00000223398 AASDHPPTQ9NRN7 309 aa18.84■□□□□ 0.61
CLIP2-201ENST00000223398 NCKIPSDQ9NZQ3 722 aa18.84■□□□□ 0.61
CLIP2-201ENST00000223398 BAIAP3O94812 1187 aa18.83■□□□□ 0.61
CLIP2-201ENST00000223398 IMPDH2P12268 514 aa18.83■□□□□ 0.61
CLIP2-201ENST00000223398 SELPP16109 830 aa18.83■□□□□ 0.61
CLIP2-201ENST00000223398 MARSP56192 900 aaKnown RBP18.83■□□□□ 0.61
CLIP2-201ENST00000223398 STX5Q13190 355 aa18.83■□□□□ 0.61
CLIP2-201ENST00000223398 NFYCQ13952 458 aa18.83■□□□□ 0.61
CLIP2-201ENST00000223398 ATP6AP1LQ52LC2 224 aa18.83■□□□□ 0.61
CLIP2-201ENST00000223398 KRT78Q8N1N4 520 aa18.83■□□□□ 0.61
CLIP2-201ENST00000223398 CATSPER1Q8NEC5 780 aa18.83■□□□□ 0.61
CLIP2-201ENST00000223398 DMGDHQ9UI17 866 aaKnown RBP18.83■□□□□ 0.61
CLIP2-201ENST00000223398 SPATA31C1P0DKV0 1188 aa18.83■□□□□ 0.61
CLIP2-201ENST00000223398 PECAM1P16284 738 aaPredicted RBP18.83■□□□□ 0.61
CLIP2-201ENST00000223398 DUSP4Q13115 394 aa18.83■□□□□ 0.61
CLIP2-201ENST00000223398 TDRD5Q8NAT2 981 aaKnown RBP18.83■□□□□ 0.61
CLIP2-201ENST00000223398 TAS2R13Q9NYV9 303 aa18.83■□□□□ 0.61
CLIP2-201ENST00000223398 GLI1P08151 1106 aa18.83■□□□□ 0.6
CLIP2-201ENST00000223398 ZBTB48P10074 688 aaPredicted RBP18.83■□□□□ 0.6
CLIP2-201ENST00000223398 RPL9P32969 192 aaKnown RBP18.83■□□□□ 0.6
CLIP2-201ENST00000223398 AQP5P55064 265 aa18.83■□□□□ 0.6
CLIP2-201ENST00000223398 NT5DC1Q5TFE4 455 aa18.83■□□□□ 0.6
CLIP2-201ENST00000223398 LBX2Q6XYB7 198 aa18.83■□□□□ 0.6
CLIP2-201ENST00000223398 BBS7Q8IWZ6 715 aa18.83■□□□□ 0.6
CLIP2-201ENST00000223398 AGGF1Q8N302 714 aaeCLIP18.83■□□□□ 0.6
CLIP2-201ENST00000223398 NETO2Q8NC67 525 aa18.83■□□□□ 0.6
CLIP2-201ENST00000223398 MRPL45Q9BRJ2 306 aaKnown RBP18.83■□□□□ 0.6
CLIP2-201ENST00000223398 SEMA4AQ9H3S1 761 aa18.83■□□□□ 0.6
CLIP2-201ENST00000223398 RPS6KB2Q9UBS0 482 aa18.83■□□□□ 0.6
CLIP2-201ENST00000223398 TUBGCP4Q9UGJ1 667 aa18.83■□□□□ 0.6
CLIP2-201ENST00000223398 BTN3A1O00481 513 aa18.83■□□□□ 0.6
CLIP2-201ENST00000223398 PGAM1P18669 254 aa18.83■□□□□ 0.6
CLIP2-201ENST00000223398 KDELR1P24390 212 aa18.83■□□□□ 0.6
CLIP2-201ENST00000223398 CHKAP35790 457 aa18.83■□□□□ 0.6
CLIP2-201ENST00000223398 ABL2P42684 1182 aa18.83■□□□□ 0.6
CLIP2-201ENST00000223398 HIRAP54198 1017 aaPredicted RBP18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms