RNA–Protein interactions for RNA: ENST00000175091.4

LAPTM4A-201, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAPTM4A, Length 1,765 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-201ENST00000175091 AUHQ13825 339 aaKnown RBP16.05■□□□□ 0.16
LAPTM4A-201ENST00000175091 STAT4Q14765 748 aa16.05■□□□□ 0.16
LAPTM4A-201ENST00000175091 C10orf120Q5SQS8 335 aa16.05■□□□□ 0.16
LAPTM4A-201ENST00000175091 RWDD4Q6NW29 188 aaKnown RBP16.05■□□□□ 0.16
LAPTM4A-201ENST00000175091 ZNF276Q8N554 614 aa16.05■□□□□ 0.16
LAPTM4A-201ENST00000175091 MCUQ8NE86 351 aa16.05■□□□□ 0.16
LAPTM4A-201ENST00000175091 DPF3Q92784 378 aa16.05■□□□□ 0.16
LAPTM4A-201ENST00000175091 C1orf74Q96LT6 269 aa16.05■□□□□ 0.16
LAPTM4A-201ENST00000175091 MARCH2Q9P0N8 246 aa16.05■□□□□ 0.16
LAPTM4A-201ENST00000175091 MAGED2Q9UNF1 606 aaPredicted RBP16.05■□□□□ 0.16
LAPTM4A-201ENST00000175091 NOVA2Q9UNW9 492 aaKnown RBP16.05■□□□□ 0.16
LAPTM4A-201ENST00000175091 YIPF1Q9Y548 306 aa16.05■□□□□ 0.16
LAPTM4A-201ENST00000175091 E9PAM4 449 aa16.05■□□□□ 0.16
LAPTM4A-201ENST00000175091 RGS16O15492 202 aaPredicted RBP16.05■□□□□ 0.16
LAPTM4A-201ENST00000175091 TLR5O60602 858 aa16.05■□□□□ 0.16
LAPTM4A-201ENST00000175091 IVLP07476 585 aa16.05■□□□□ 0.16
LAPTM4A-201ENST00000175091 FDFT1P37268 417 aa16.05■□□□□ 0.16
LAPTM4A-201ENST00000175091 SLCO1A2P46721 670 aa16.05■□□□□ 0.16
LAPTM4A-201ENST00000175091 PPIGQ13427 754 aaKnown RBP eCLIP16.05■□□□□ 0.16
LAPTM4A-201ENST00000175091 RAB33AQ14088 237 aa16.05■□□□□ 0.16
LAPTM4A-201ENST00000175091 HP1BP3Q5SSJ5 553 aaPredicted RBP16.05■□□□□ 0.16
LAPTM4A-201ENST00000175091 SYCP2LQ5T4T6 812 aa16.05■□□□□ 0.16
LAPTM4A-201ENST00000175091 SNX30Q5VWJ9 437 aa16.05■□□□□ 0.16
LAPTM4A-201ENST00000175091 ZNF534Q76KX8 674 aa16.05■□□□□ 0.16
LAPTM4A-201ENST00000175091 ANKMY2Q8IV38 441 aa16.05■□□□□ 0.16
LAPTM4A-201ENST00000175091 GPR65Q8IYL9 337 aa16.05■□□□□ 0.16
LAPTM4A-201ENST00000175091 ZNF683Q8IZ20 524 aa16.05■□□□□ 0.16
LAPTM4A-201ENST00000175091 ATP11CQ8NB49 1132 aa16.05■□□□□ 0.16
LAPTM4A-201ENST00000175091 PDZD8Q8NEN9 1154 aa16.05■□□□□ 0.16
LAPTM4A-201ENST00000175091 CATSPERBQ9H7T0 1116 aa16.05■□□□□ 0.16
LAPTM4A-201ENST00000175091 CCSER2Q9H7U1 834 aa16.05■□□□□ 0.16
LAPTM4A-201ENST00000175091 BCCIPQ9P287 314 aaKnown RBP eCLIP16.05■□□□□ 0.16
LAPTM4A-201ENST00000175091 TLDC2A0PJX2 215 aa16.04■□□□□ 0.16
LAPTM4A-201ENST00000175091 AGTP01019 485 aa16.04■□□□□ 0.16
LAPTM4A-201ENST00000175091 HMGA1P17096 107 aaKnown RBP16.04■□□□□ 0.16
LAPTM4A-201ENST00000175091 PTPN3P26045 913 aa16.04■□□□□ 0.16
LAPTM4A-201ENST00000175091 MAGEA3P43357 314 aa16.04■□□□□ 0.16
LAPTM4A-201ENST00000175091 MLLT6P55198 1093 aaPredicted RBP16.04■□□□□ 0.16
LAPTM4A-201ENST00000175091 GPX6P59796 221 aa16.04■□□□□ 0.16
LAPTM4A-201ENST00000175091 RING1Q06587 406 aa16.04■□□□□ 0.16
LAPTM4A-201ENST00000175091 ZNF33AQ06730 810 aa16.04■□□□□ 0.16
LAPTM4A-201ENST00000175091 BBS9Q3SYG4 887 aa16.04■□□□□ 0.16
LAPTM4A-201ENST00000175091 DNAJC21Q5F1R6 531 aaKnown RBP16.04■□□□□ 0.16
LAPTM4A-201ENST00000175091 MIB1Q86YT6 1006 aa16.04■□□□□ 0.16
LAPTM4A-201ENST00000175091 ARHGAP12Q8IWW6 846 aa16.04■□□□□ 0.16
LAPTM4A-201ENST00000175091 ZNF567Q8N184 647 aa16.04■□□□□ 0.16
LAPTM4A-201ENST00000175091 FBXO36Q8NEA4 188 aa16.04■□□□□ 0.16
LAPTM4A-201ENST00000175091 PYROXD1Q8WU10 500 aa16.04■□□□□ 0.16
LAPTM4A-201ENST00000175091 BTN2A3PQ96KV6 586 aa16.04■□□□□ 0.16
LAPTM4A-201ENST00000175091 MYRFLQ96LU7 910 aa16.04■□□□□ 0.16
LAPTM4A-201ENST00000175091 CDK5RAP1Q96SZ6 601 aaKnown RBP16.04■□□□□ 0.16
LAPTM4A-201ENST00000175091 CEP41Q9BYV8 373 aa16.04■□□□□ 0.16
LAPTM4A-201ENST00000175091 CYP4F11Q9HBI6 524 aa16.04■□□□□ 0.16
LAPTM4A-201ENST00000175091 EIF2B3Q9NR50 452 aaKnown RBP16.04■□□□□ 0.16
LAPTM4A-201ENST00000175091 EURLQ9NYK6 297 aa16.04■□□□□ 0.16
LAPTM4A-201ENST00000175091 IGSF9Q9P2J2 1179 aa16.04■□□□□ 0.16
LAPTM4A-201ENST00000175091 TEX264Q9Y6I9 313 aa16.04■□□□□ 0.16
LAPTM4A-201ENST00000175091 ZBBXA8MT70 800 aa16.03■□□□□ 0.16
LAPTM4A-201ENST00000175091 WASH4PA8MWX3 477 aa16.03■□□□□ 0.16
LAPTM4A-201ENST00000175091 KCNK1O00180 336 aa16.03■□□□□ 0.16
LAPTM4A-201ENST00000175091 MTSS1O43312 755 aa16.03■□□□□ 0.16
LAPTM4A-201ENST00000175091 CSH1P0DML2 217 aa16.03■□□□□ 0.16
LAPTM4A-201ENST00000175091 CSH2P0DML3 217 aa16.03■□□□□ 0.16
LAPTM4A-201ENST00000175091 TSHRP16473 764 aa16.03■□□□□ 0.16
LAPTM4A-201ENST00000175091 MAGOHP61326 146 aaKnown RBP16.03■□□□□ 0.16
LAPTM4A-201ENST00000175091 MTM1Q13496 603 aa16.03■□□□□ 0.16
LAPTM4A-201ENST00000175091 CCDC38Q502W7 563 aa16.03■□□□□ 0.16
LAPTM4A-201ENST00000175091 MS4A13Q5J8X5 152 aa16.03■□□□□ 0.16
LAPTM4A-201ENST00000175091 C14orf80Q86SX3 495 aa16.03■□□□□ 0.16
LAPTM4A-201ENST00000175091 CAND1Q86VP6 1230 aaKnown RBP16.03■□□□□ 0.16
LAPTM4A-201ENST00000175091 AGGF1Q8N302 714 aaeCLIP16.03■□□□□ 0.16
LAPTM4A-201ENST00000175091 LZTR1Q8N653 840 aa16.03■□□□□ 0.16
LAPTM4A-201ENST00000175091 RTL3Q8N8U3 475 aaKnown RBP16.03■□□□□ 0.16
LAPTM4A-201ENST00000175091 ATP6V0D2Q8N8Y2 350 aa16.03■□□□□ 0.16
LAPTM4A-201ENST00000175091 AUTS2Q8WXX7 1259 aa16.03■□□□□ 0.16
LAPTM4A-201ENST00000175091 TRMT2BQ96GJ1 504 aaKnown RBP16.03■□□□□ 0.16
LAPTM4A-201ENST00000175091 CELF6Q96J87 481 aaKnown RBP16.03■□□□□ 0.16
LAPTM4A-201ENST00000175091 STMN4Q9H169 189 aaPredicted RBP16.03■□□□□ 0.16
LAPTM4A-201ENST00000175091 ZBP1Q9H171 429 aa16.03■□□□□ 0.16
LAPTM4A-201ENST00000175091 SEPT10Q9P0V9 454 aa16.03■□□□□ 0.16
LAPTM4A-201ENST00000175091 STK39Q9UEW8 545 aa16.03■□□□□ 0.16
LAPTM4A-201ENST00000175091 LGALS13Q9UHV8 139 aa16.03■□□□□ 0.16
LAPTM4A-201ENST00000175091 IGLV3-10A0A075B6K4 115 aa16.03■□□□□ 0.16
LAPTM4A-201ENST00000175091 SHOX2O60902 331 aaPredicted RBP16.03■□□□□ 0.16
LAPTM4A-201ENST00000175091 DNAJB2P25686 324 aa16.03■□□□□ 0.16
LAPTM4A-201ENST00000175091 HPDP32754 393 aaPredicted RBP16.03■□□□□ 0.16
LAPTM4A-201ENST00000175091 TUBP50607 506 aa16.03■□□□□ 0.16
LAPTM4A-201ENST00000175091 FPGSQ05932 587 aa16.03■□□□□ 0.16
LAPTM4A-201ENST00000175091 NLRP14Q86W24 1093 aa16.03■□□□□ 0.16
LAPTM4A-201ENST00000175091 DEPDC1BQ8WUY9 529 aa16.03■□□□□ 0.16
LAPTM4A-201ENST00000175091 BADQ92934 168 aa16.03■□□□□ 0.16
LAPTM4A-201ENST00000175091 VPS37BQ9H9H4 285 aa16.03■□□□□ 0.16
LAPTM4A-201ENST00000175091 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.03■□□□□ 0.16
LAPTM4A-201ENST00000175091 MRPL17Q9NRX2 175 aaKnown RBP16.03■□□□□ 0.16
LAPTM4A-201ENST00000175091 FNIP2Q9P278 1114 aa16.03■□□□□ 0.16
LAPTM4A-201ENST00000175091 PRKAG2Q9UGJ0 569 aa16.03■□□□□ 0.16
LAPTM4A-201ENST00000175091 SLC12A6Q9UHW9 1150 aa16.03■□□□□ 0.16
LAPTM4A-201ENST00000175091 CHMP2BQ9UQN3 213 aa16.03■□□□□ 0.16
LAPTM4A-201ENST00000175091 PCDHB12Q9Y5F1 795 aa16.03■□□□□ 0.16
LAPTM4A-201ENST00000175091 EXOC1LA0A1B0GW35 172 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms