RNA–Protein interactions for RNA: ENSMUST00000112298.9

Ssh1-202, Transcript of Protein phosphatase Slingshot homolog 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ssh1, Length 5,584 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssh1-202ENSMUST00000112298 Vmn2r62K7N712 859 aa12.69□□□□□ -0.38
Ssh1-202ENSMUST00000112298 Myl4P09541 193 aaKnown RBP12.69□□□□□ -0.38
Ssh1-202ENSMUST00000112298 RelaQ04207 549 aa12.69□□□□□ -0.38
Ssh1-202ENSMUST00000112298 Ttc9Q3V038 219 aa12.69□□□□□ -0.38
Ssh1-202ENSMUST00000112298 Dph1Q5NCQ5 438 aa12.69□□□□□ -0.38
Ssh1-202ENSMUST00000112298 LbpQ61805 481 aa12.69□□□□□ -0.38
Ssh1-202ENSMUST00000112298 Otud6aQ6IE21 290 aa12.69□□□□□ -0.38
Ssh1-202ENSMUST00000112298 Ubxn7Q6P5G6 467 aa12.69□□□□□ -0.38
Ssh1-202ENSMUST00000112298 Gpr151Q7TSN6 422 aa12.69□□□□□ -0.38
Ssh1-202ENSMUST00000112298 Dlg1Q811D0 905 aaKnown RBP12.69□□□□□ -0.38
Ssh1-202ENSMUST00000112298 Ptrh1Q8BW00 204 aa12.69□□□□□ -0.38
Ssh1-202ENSMUST00000112298 Sfrp1Q8C4U3 314 aa12.69□□□□□ -0.38
Ssh1-202ENSMUST00000112298 Cog2Q921L5 731 aa12.69□□□□□ -0.38
Ssh1-202ENSMUST00000112298 Q9CQF4 240 aa12.69□□□□□ -0.38
Ssh1-202ENSMUST00000112298 AcadsbQ9DBL1 432 aa12.69□□□□□ -0.38
Ssh1-202ENSMUST00000112298 Inpp4aQ9EPW0 939 aa12.69□□□□□ -0.38
Ssh1-202ENSMUST00000112298 Katna1Q9WV86 491 aa12.69□□□□□ -0.38
Ssh1-202ENSMUST00000112298 Gm7086A0A1W2P766 342 aa12.69□□□□□ -0.38
Ssh1-202ENSMUST00000112298 Tubb1A2AQ07 451 aa12.69□□□□□ -0.38
Ssh1-202ENSMUST00000112298 Siah3B2RWG3 268 aa12.69□□□□□ -0.38
Ssh1-202ENSMUST00000112298 Rdh7O88451 316 aa12.69□□□□□ -0.38
Ssh1-202ENSMUST00000112298 GclcP97494 637 aa12.69□□□□□ -0.38
Ssh1-202ENSMUST00000112298 Fam131bQ3TY60 332 aa12.69□□□□□ -0.38
Ssh1-202ENSMUST00000112298 Dnajc1Q61712 552 aaKnown RBP12.69□□□□□ -0.38
Ssh1-202ENSMUST00000112298 Olfr297Q7TS07 310 aa12.69□□□□□ -0.38
Ssh1-202ENSMUST00000112298 Oscp1Q8BHW2 379 aa12.69□□□□□ -0.38
Ssh1-202ENSMUST00000112298 Hus1Q8BQY8 280 aa12.69□□□□□ -0.38
Ssh1-202ENSMUST00000112298 Mcoln2Q8K595 566 aa12.69□□□□□ -0.38
Ssh1-202ENSMUST00000112298 Sh3kbp1Q8R550 709 aaKnown RBP12.69□□□□□ -0.38
Ssh1-202ENSMUST00000112298 Lrrc71Q9D3W5 558 aa12.69□□□□□ -0.38
Ssh1-202ENSMUST00000112298 Rnft1Q9DCN7 395 aa12.69□□□□□ -0.38
Ssh1-202ENSMUST00000112298 Mroh2aD3Z750 1679 aa12.68□□□□□ -0.38
Ssh1-202ENSMUST00000112298 Nipsnap3aB1AWZ3 247 aa12.68□□□□□ -0.38
Ssh1-202ENSMUST00000112298 Slc16a8O35308 492 aa12.68□□□□□ -0.38
Ssh1-202ENSMUST00000112298 EpoP07321 192 aa12.68□□□□□ -0.38
Ssh1-202ENSMUST00000112298 Hpcal1P62748 193 aa12.68□□□□□ -0.38
Ssh1-202ENSMUST00000112298 Aars2Q14CH7 980 aa12.68□□□□□ -0.38
Ssh1-202ENSMUST00000112298 Myl12bQ3THE2 172 aaKnown RBP12.68□□□□□ -0.38
Ssh1-202ENSMUST00000112298 Rnf145Q5SWK7 663 aa12.68□□□□□ -0.38
Ssh1-202ENSMUST00000112298 Rexo4Q6PAQ4 432 aaKnown RBP12.68□□□□□ -0.38
Ssh1-202ENSMUST00000112298 Gpatch2lQ6PE65 482 aa12.68□□□□□ -0.38
Ssh1-202ENSMUST00000112298 Nyap1Q6PFX7 833 aa12.68□□□□□ -0.38
Ssh1-202ENSMUST00000112298 Arhgap25Q8BYW1 648 aa12.68□□□□□ -0.38
Ssh1-202ENSMUST00000112298 Pex5lQ8C437 567 aa12.68□□□□□ -0.38
Ssh1-202ENSMUST00000112298 Mrpl9Q99N94 265 aaKnown RBP12.68□□□□□ -0.38
Ssh1-202ENSMUST00000112298 Gm5478D3Z6R0 159 aa12.68□□□□□ -0.38
Ssh1-202ENSMUST00000112298 Mcpt1P11034 246 aa12.68□□□□□ -0.38
Ssh1-202ENSMUST00000112298 Atoh1P48985 351 aa12.68□□□□□ -0.38
Ssh1-202ENSMUST00000112298 Kansl1lQ5DTI6 991 aa12.68□□□□□ -0.38
Ssh1-202ENSMUST00000112298 Klhl17Q6TDP3 640 aa12.68□□□□□ -0.38
Ssh1-202ENSMUST00000112298 Ppp1r16aQ923M0 524 aa12.68□□□□□ -0.38
Ssh1-202ENSMUST00000112298 Q99LU8 229 aa12.68□□□□□ -0.38
Ssh1-202ENSMUST00000112298 Pkp2Q9CQ73 795 aaKnown RBP12.68□□□□□ -0.38
Ssh1-202ENSMUST00000112298 Hes6Q9JHE6 224 aa12.68□□□□□ -0.38
Ssh1-202ENSMUST00000112298 Gm11983V9GXS8 105 aa12.68□□□□□ -0.38
Ssh1-202ENSMUST00000112298 Gm44511A0A0N4SW10 223 aa12.68□□□□□ -0.38
Ssh1-202ENSMUST00000112298 Hmgcs2P54869 508 aa12.68□□□□□ -0.38
Ssh1-202ENSMUST00000112298 YwhaqP68254 245 aaKnown RBP12.68□□□□□ -0.38
Ssh1-202ENSMUST00000112298 Fam126aQ6P9N1 521 aa12.68□□□□□ -0.38
Ssh1-202ENSMUST00000112298 Fgd2Q8BY35 655 aa12.68□□□□□ -0.38
Ssh1-202ENSMUST00000112298 Spdye4bQ8CDE8 236 aa12.68□□□□□ -0.38
Ssh1-202ENSMUST00000112298 Acsm2Q8K0L3 575 aa12.68□□□□□ -0.38
Ssh1-202ENSMUST00000112298 Mtrf1Q8K126 446 aa12.68□□□□□ -0.38
Ssh1-202ENSMUST00000112298 Lyrm1Q9CQB7 122 aa12.68□□□□□ -0.38
Ssh1-202ENSMUST00000112298 Atp5f1Q9CQQ7 256 aaKnown RBP12.68□□□□□ -0.38
Ssh1-202ENSMUST00000112298 Pin4Q9CWW6 131 aa12.68□□□□□ -0.38
Ssh1-202ENSMUST00000112298 Thap11Q9JJD0 305 aa12.68□□□□□ -0.38
Ssh1-202ENSMUST00000112298 Dkk3Q9QUN9 349 aa12.68□□□□□ -0.38
Ssh1-202ENSMUST00000112298 Ifrd1P19182 449 aa12.68□□□□□ -0.38
Ssh1-202ENSMUST00000112298 Mcpt4P21812 246 aa12.68□□□□□ -0.38
Ssh1-202ENSMUST00000112298 Stt3bQ3TDQ1 823 aa12.68□□□□□ -0.38
Ssh1-202ENSMUST00000112298 Fam129aQ3UW53 926 aa12.68□□□□□ -0.38
Ssh1-202ENSMUST00000112298 Senp5Q6NXL6 749 aa12.68□□□□□ -0.38
Ssh1-202ENSMUST00000112298 Tnpo3Q6P2B1 923 aaKnown RBP12.68□□□□□ -0.38
Ssh1-202ENSMUST00000112298 Ubash3bQ8BGG7 638 aa12.68□□□□□ -0.38
Ssh1-202ENSMUST00000112298 Cdkn2aipQ8BI72 563 aa12.68□□□□□ -0.38
Ssh1-202ENSMUST00000112298 Plekhm3Q8BM47 761 aa12.68□□□□□ -0.38
Ssh1-202ENSMUST00000112298 GaleQ8R059 347 aa12.68□□□□□ -0.38
Ssh1-202ENSMUST00000112298 Pla2g12bQ99P27 195 aa12.68□□□□□ -0.38
Ssh1-202ENSMUST00000112298 Edf1Q9JMG1 148 aaKnown RBP12.68□□□□□ -0.38
Ssh1-202ENSMUST00000112298 Limd1Q9QXD8 668 aa12.68□□□□□ -0.38
Ssh1-202ENSMUST00000112298 Pld1Q9Z280 1074 aa12.68□□□□□ -0.38
Ssh1-202ENSMUST00000112298 Lgr4A2ARI4 951 aa12.67□□□□□ -0.38
Ssh1-202ENSMUST00000112298 Smok3aC0HKC8 504 aa12.67□□□□□ -0.38
Ssh1-202ENSMUST00000112298 Smok3bC0HKC9 504 aa12.67□□□□□ -0.38
Ssh1-202ENSMUST00000112298 Tsc22d2E9Q7M2 769 aa12.67□□□□□ -0.38
Ssh1-202ENSMUST00000112298 Bnc1O35914 961 aa12.67□□□□□ -0.38
Ssh1-202ENSMUST00000112298 AvilO88398 819 aa12.67□□□□□ -0.38
Ssh1-202ENSMUST00000112298 Defa8P50706 81 aa12.67□□□□□ -0.38
Ssh1-202ENSMUST00000112298 PtpaP58389 323 aa12.67□□□□□ -0.38
Ssh1-202ENSMUST00000112298 Emilin3P59900 758 aa12.67□□□□□ -0.38
Ssh1-202ENSMUST00000112298 NfixP70257 488 aa12.67□□□□□ -0.38
Ssh1-202ENSMUST00000112298 Smyd5Q3TYX3 416 aa12.67□□□□□ -0.38
Ssh1-202ENSMUST00000112298 Nutm2Q3V0C3 733 aa12.67□□□□□ -0.38
Ssh1-202ENSMUST00000112298 Prl2c1Q5SVL9 228 aa12.67□□□□□ -0.38
Ssh1-202ENSMUST00000112298 RadilQ69Z89 1099 aa12.67□□□□□ -0.38
Ssh1-202ENSMUST00000112298 Plekha6Q7TQG1 1173 aa12.67□□□□□ -0.38
Ssh1-202ENSMUST00000112298 Arhgap12Q8C0D4 838 aa12.67□□□□□ -0.38
Ssh1-202ENSMUST00000112298 Tbl3Q8C4J7 801 aaKnown RBP12.67□□□□□ -0.38
Ssh1-202ENSMUST00000112298 CenpnQ9CZW2 337 aa12.67□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 23.9 ms