RNA–Protein interactions for RNA: ENSMUST00000077689.13

Ssh1-201, Transcript of Protein phosphatase Slingshot homolog 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ssh1, Length 3,164 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssh1-201ENSMUST00000077689 Tmcc2Q80W04 706 aa11.74□□□□□ -0.53
Ssh1-201ENSMUST00000077689 Mup21Q80YX8 181 aa11.74□□□□□ -0.53
Ssh1-201ENSMUST00000077689 Pcmtd2Q8BHD8 359 aa11.74□□□□□ -0.53
Ssh1-201ENSMUST00000077689 Anapc2Q8BZQ7 837 aa11.74□□□□□ -0.53
Ssh1-201ENSMUST00000077689 Calhm4Q8CE93 315 aa11.74□□□□□ -0.53
Ssh1-201ENSMUST00000077689 Acat1Q8QZT1 424 aa11.74□□□□□ -0.53
Ssh1-201ENSMUST00000077689 Rpap2Q8VC34 614 aa11.74□□□□□ -0.53
Ssh1-201ENSMUST00000077689 Mta3Q924K8 591 aa11.74□□□□□ -0.53
Ssh1-201ENSMUST00000077689 Bmp10Q9R229 421 aa11.74□□□□□ -0.53
Ssh1-201ENSMUST00000077689 Top3bQ9Z321 862 aaKnown RBP11.74□□□□□ -0.53
Ssh1-201ENSMUST00000077689 Sult2a3D3Z1W5 285 aa11.74□□□□□ -0.53
Ssh1-201ENSMUST00000077689 Gm3182K7N6T8 263 aa11.74□□□□□ -0.53
Ssh1-201ENSMUST00000077689 Dusp8O09112 663 aa11.74□□□□□ -0.53
Ssh1-201ENSMUST00000077689 BhmtO35490 407 aaKnown RBP11.74□□□□□ -0.53
Ssh1-201ENSMUST00000077689 Pknox1O70477 436 aa11.74□□□□□ -0.53
Ssh1-201ENSMUST00000077689 Grid2ipQ0QWG9 1203 aa11.74□□□□□ -0.53
Ssh1-201ENSMUST00000077689 Insm1Q63ZV0 521 aa11.74□□□□□ -0.53
Ssh1-201ENSMUST00000077689 MslnlQ8C160 685 aa11.74□□□□□ -0.53
Ssh1-201ENSMUST00000077689 Bhlhe22Q8C6A8 355 aa11.74□□□□□ -0.53
Ssh1-201ENSMUST00000077689 Plin3Q9DBG5 437 aa11.74□□□□□ -0.53
Ssh1-201ENSMUST00000077689 Anxa9Q9JHQ0 345 aa11.74□□□□□ -0.53
Ssh1-201ENSMUST00000077689 Rad9aQ9Z0F6 389 aa11.74□□□□□ -0.53
Ssh1-201ENSMUST00000077689 Aldh18a1Q9Z110 795 aa11.74□□□□□ -0.53
Ssh1-201ENSMUST00000077689 Stx1bP61264 288 aa11.73□□□□□ -0.53
Ssh1-201ENSMUST00000077689 Npas2P97460 816 aa11.73□□□□□ -0.53
Ssh1-201ENSMUST00000077689 CtscP97821 462 aa11.73□□□□□ -0.53
Ssh1-201ENSMUST00000077689 Zc3h15Q3TIV5 426 aaKnown RBP11.73□□□□□ -0.53
Ssh1-201ENSMUST00000077689 Gm3414Q3TNU4 584 aa11.73□□□□□ -0.53
Ssh1-201ENSMUST00000077689 Stip1Q60864 543 aaKnown RBP11.73□□□□□ -0.53
Ssh1-201ENSMUST00000077689 Nab1Q61122 486 aa11.73□□□□□ -0.53
Ssh1-201ENSMUST00000077689 Cyp2c29Q64458 490 aa11.73□□□□□ -0.53
Ssh1-201ENSMUST00000077689 Itih5Q8BJD1 952 aa11.73□□□□□ -0.53
Ssh1-201ENSMUST00000077689 Hdac7Q8C2B3 938 aa11.73□□□□□ -0.53
Ssh1-201ENSMUST00000077689 Appl2Q8K3G9 662 aa11.73□□□□□ -0.53
Ssh1-201ENSMUST00000077689 Nrbf2Q8VCQ3 287 aa11.73□□□□□ -0.53
Ssh1-201ENSMUST00000077689 Smg8Q8VE18 991 aa11.73□□□□□ -0.53
Ssh1-201ENSMUST00000077689 Xpo5Q924C1 1204 aaKnown RBP11.73□□□□□ -0.53
Ssh1-201ENSMUST00000077689 Hormad1Q9D5T7 392 aa11.73□□□□□ -0.53
Ssh1-201ENSMUST00000077689 Q9DAQ4 598 aa11.73□□□□□ -0.53
Ssh1-201ENSMUST00000077689 Mettl15Q9DCL4 406 aa11.73□□□□□ -0.53
Ssh1-201ENSMUST00000077689 Tbk1Q9WUN2 729 aa11.73□□□□□ -0.53
Ssh1-201ENSMUST00000077689 Smok4aA0JLX3 433 aa11.73□□□□□ -0.53
Ssh1-201ENSMUST00000077689 Cyp4f40G3UW81 524 aa11.73□□□□□ -0.53
Ssh1-201ENSMUST00000077689 SpibO35906 267 aa11.73□□□□□ -0.53
Ssh1-201ENSMUST00000077689 Kcnn3P58391 732 aa11.73□□□□□ -0.53
Ssh1-201ENSMUST00000077689 Rit1P70426 219 aa11.73□□□□□ -0.53
Ssh1-201ENSMUST00000077689 Alkbh5Q3TSG4 395 aaKnown RBP11.73□□□□□ -0.53
Ssh1-201ENSMUST00000077689 Tmem63bQ3TWI9 832 aa11.73□□□□□ -0.53
Ssh1-201ENSMUST00000077689 Tcf12Q61286 706 aa11.73□□□□□ -0.53
Ssh1-201ENSMUST00000077689 Stx3Q64704 289 aa11.73□□□□□ -0.53
Ssh1-201ENSMUST00000077689 Olfr1505Q7TQQ2 316 aa11.73□□□□□ -0.53
Ssh1-201ENSMUST00000077689 Vac14Q80WQ2 782 aa11.73□□□□□ -0.53
Ssh1-201ENSMUST00000077689 P2ry10Q8BFU7 328 aa11.73□□□□□ -0.53
Ssh1-201ENSMUST00000077689 Atxn7l2Q8C8K6 696 aa11.73□□□□□ -0.53
Ssh1-201ENSMUST00000077689 Calhm6Q8C9E8 313 aa11.73□□□□□ -0.53
Ssh1-201ENSMUST00000077689 Gm5591Q8CDK1 855 aa11.73□□□□□ -0.53
Ssh1-201ENSMUST00000077689 Gnl3Q8CI11 538 aaKnown RBP11.73□□□□□ -0.53
Ssh1-201ENSMUST00000077689 Tmem259Q8CIV2 574 aa11.73□□□□□ -0.53
Ssh1-201ENSMUST00000077689 Klhl2Q8JZP3 593 aa11.73□□□□□ -0.53
Ssh1-201ENSMUST00000077689 Tdrd3Q91W18 743 aaKnown RBP11.73□□□□□ -0.53
Ssh1-201ENSMUST00000077689 F11Q91Y47 624 aa11.73□□□□□ -0.53
Ssh1-201ENSMUST00000077689 Pabpc6Q9D4E6 643 aaKnown RBP11.73□□□□□ -0.53
Ssh1-201ENSMUST00000077689 Gadd45gQ9Z111 159 aa11.73□□□□□ -0.53
Ssh1-201ENSMUST00000077689 Ccdc88cQ6VGS5 2009 aa11.73□□□□□ -0.53
Ssh1-201ENSMUST00000077689 Fam205aA2APU8 1308 aa11.73□□□□□ -0.53
Ssh1-201ENSMUST00000077689 Krt28A6BLY7 462 aa11.73□□□□□ -0.53
Ssh1-201ENSMUST00000077689 Gbp11A9YVJ5 442 aa11.73□□□□□ -0.53
Ssh1-201ENSMUST00000077689 Krt36B1AQ75 473 aa11.73□□□□□ -0.53
Ssh1-201ENSMUST00000077689 Eddm13E9Q7F5 164 aa11.73□□□□□ -0.53
Ssh1-201ENSMUST00000077689 Stra6O70491 670 aa11.73□□□□□ -0.53
Ssh1-201ENSMUST00000077689 Tuba3aP05214 450 aaKnown RBP11.73□□□□□ -0.53
Ssh1-201ENSMUST00000077689 Aldh1a1P24549 501 aa11.73□□□□□ -0.53
Ssh1-201ENSMUST00000077689 Btbd3P58545 530 aa11.73□□□□□ -0.53
Ssh1-201ENSMUST00000077689 Ranbp9P69566 653 aa11.73□□□□□ -0.53
Ssh1-201ENSMUST00000077689 Olfr845Q7TRG2 312 aa11.73□□□□□ -0.53
Ssh1-201ENSMUST00000077689 Rab36Q8CAM5 267 aa11.73□□□□□ -0.53
Ssh1-201ENSMUST00000077689 Hectd2Q8CDU6 774 aa11.73□□□□□ -0.53
Ssh1-201ENSMUST00000077689 Creb5Q8K1L0 357 aa11.73□□□□□ -0.53
Ssh1-201ENSMUST00000077689 Plcl2Q8K394 1128 aa11.73□□□□□ -0.53
Ssh1-201ENSMUST00000077689 Frmd4bQ920B0 1035 aa11.73□□□□□ -0.53
Ssh1-201ENSMUST00000077689 Hemk1Q921L7 340 aa11.73□□□□□ -0.53
Ssh1-201ENSMUST00000077689 Traf7Q922B6 594 aa11.73□□□□□ -0.53
Ssh1-201ENSMUST00000077689 NepnQ9CQ76 512 aa11.73□□□□□ -0.53
Ssh1-201ENSMUST00000077689 Arhgef25Q9CWR0 618 aa11.73□□□□□ -0.53
Ssh1-201ENSMUST00000077689 Ripk3Q9QZL0 486 aa11.73□□□□□ -0.53
Ssh1-201ENSMUST00000077689 Ifi202Q9R002 445 aa11.73□□□□□ -0.53
Ssh1-201ENSMUST00000077689 Arid3bQ9Z1N7 568 aa11.73□□□□□ -0.53
Ssh1-201ENSMUST00000077689 Col1a1P11087 1453 aa11.72□□□□□ -0.53
Ssh1-201ENSMUST00000077689 Ccdc85cE9Q6B2 420 aa11.72□□□□□ -0.53
Ssh1-201ENSMUST00000077689 Aldh3a1P47739 453 aa11.72□□□□□ -0.53
Ssh1-201ENSMUST00000077689 Rps6P62754 249 aaKnown RBP11.72□□□□□ -0.53
Ssh1-201ENSMUST00000077689 Ubn1Q4G0F8 1135 aa11.72□□□□□ -0.53
Ssh1-201ENSMUST00000077689 Nxpe4Q52KP5 543 aa11.72□□□□□ -0.53
Ssh1-201ENSMUST00000077689 Amigo1Q80ZD8 492 aa11.72□□□□□ -0.53
Ssh1-201ENSMUST00000077689 Pdk1Q8BFP9 434 aaKnown RBP11.72□□□□□ -0.53
Ssh1-201ENSMUST00000077689 Ago4Q8CJF8 861 aa11.72□□□□□ -0.53
Ssh1-201ENSMUST00000077689 Sh2d5Q8JZW5 429 aa11.72□□□□□ -0.53
Ssh1-201ENSMUST00000077689 HnmtQ91VF2 295 aa11.72□□□□□ -0.53
Ssh1-201ENSMUST00000077689 St13Q99L47 371 aaKnown RBP11.72□□□□□ -0.53
Ssh1-201ENSMUST00000077689 4933425L06RikQ9D3Z8 585 aa11.72□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 48.9 ms