RNA–Protein interactions for RNA: ENSMUST00000069187.11

Trim23-203, Transcript of E3 ubiquitin-protein ligase TRIM23, mousemouse

TSL 1 (best) BASIC

Gene Trim23, Length 3,546 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23-203ENSMUST00000069187 Sntg2Q925E0 539 aa11.69□□□□□ -0.54
Trim23-203ENSMUST00000069187 Prpf19Q99KP6 504 aaKnown RBP11.69□□□□□ -0.54
Trim23-203ENSMUST00000069187 Arhgap8Q9CXP4 425 aa11.69□□□□□ -0.54
Trim23-203ENSMUST00000069187 Ddx56Q9D0R4 546 aaKnown RBP11.69□□□□□ -0.54
Trim23-203ENSMUST00000069187 Rad18Q9QXK2 509 aaKnown RBP11.69□□□□□ -0.54
Trim23-203ENSMUST00000069187 Prdm12A2AJ77 365 aa11.69□□□□□ -0.54
Trim23-203ENSMUST00000069187 Slc16a6B1AT66 607 aa11.69□□□□□ -0.54
Trim23-203ENSMUST00000069187 Ptar1E9QAB6 424 aa11.69□□□□□ -0.54
Trim23-203ENSMUST00000069187 Cd3gP11942 182 aa11.69□□□□□ -0.54
Trim23-203ENSMUST00000069187 Gnrh1P13562 90 aa11.69□□□□□ -0.54
Trim23-203ENSMUST00000069187 Elf3Q3UPW2 391 aa11.69□□□□□ -0.54
Trim23-203ENSMUST00000069187 9930111J21Rik1Q5SVP0 844 aa11.69□□□□□ -0.54
Trim23-203ENSMUST00000069187 Mtmr14Q8VEL2 648 aa11.69□□□□□ -0.54
Trim23-203ENSMUST00000069187 PlvapQ91VC4 438 aa11.69□□□□□ -0.54
Trim23-203ENSMUST00000069187 Rsl24d1Q99L28 163 aa11.69□□□□□ -0.54
Trim23-203ENSMUST00000069187 Srfbp1Q9CZ91 441 aaKnown RBP11.69□□□□□ -0.54
Trim23-203ENSMUST00000069187 Tbc1d20Q9D9I4 402 aa11.69□□□□□ -0.54
Trim23-203ENSMUST00000069187 UprtB1AVZ0 310 aa11.69□□□□□ -0.54
Trim23-203ENSMUST00000069187 Olfr292F8VQ84 308 aa11.69□□□□□ -0.54
Trim23-203ENSMUST00000069187 Kng1O08677 661 aa11.69□□□□□ -0.54
Trim23-203ENSMUST00000069187 Tap2P36371 702 aa11.69□□□□□ -0.54
Trim23-203ENSMUST00000069187 Tac1P41539 130 aa11.69□□□□□ -0.54
Trim23-203ENSMUST00000069187 Syce1lQ5D525 247 aa11.69□□□□□ -0.54
Trim23-203ENSMUST00000069187 Ntan1Q64311 310 aa11.69□□□□□ -0.54
Trim23-203ENSMUST00000069187 Armcx2Q6A058 784 aaKnown RBP11.69□□□□□ -0.54
Trim23-203ENSMUST00000069187 Znf12Q7TSI0 686 aa11.69□□□□□ -0.54
Trim23-203ENSMUST00000069187 Tmem260Q8BMD6 703 aa11.69□□□□□ -0.54
Trim23-203ENSMUST00000069187 Slc7a14Q8BXR1 771 aa11.69□□□□□ -0.54
Trim23-203ENSMUST00000069187 Ago3Q8CJF9 860 aa11.69□□□□□ -0.54
Trim23-203ENSMUST00000069187 Pcdha2Q91Y17 948 aa11.69□□□□□ -0.54
Trim23-203ENSMUST00000069187 Mtfr1Q99MB2 328 aa11.69□□□□□ -0.54
Trim23-203ENSMUST00000069187 CoprsQ9CQ13 173 aa11.69□□□□□ -0.54
Trim23-203ENSMUST00000069187 Cables1Q9ESJ1 568 aa11.69□□□□□ -0.54
Trim23-203ENSMUST00000069187 Cpsf3Q9QXK7 684 aa11.69□□□□□ -0.54
Trim23-203ENSMUST00000069187 Dnajc12Q9R022 198 aa11.69□□□□□ -0.54
Trim23-203ENSMUST00000069187 Chek2Q9Z265 546 aa11.69□□□□□ -0.54
Trim23-203ENSMUST00000069187 Atad5Q4QY64 1826 aa11.68□□□□□ -0.54
Trim23-203ENSMUST00000069187 Plekhg4A0A1L1SU27 1217 aa11.68□□□□□ -0.54
Trim23-203ENSMUST00000069187 Mup10A2BIN1 180 aa11.68□□□□□ -0.54
Trim23-203ENSMUST00000069187 Mup14A2CEK7 180 aa11.68□□□□□ -0.54
Trim23-203ENSMUST00000069187 Mup19A9C497 187 aa11.68□□□□□ -0.54
Trim23-203ENSMUST00000069187 Mup15A9R9W0 180 aa11.68□□□□□ -0.54
Trim23-203ENSMUST00000069187 Mup17B5X0G2 180 aa11.68□□□□□ -0.54
Trim23-203ENSMUST00000069187 Mup8E9PVW0 235 aa11.68□□□□□ -0.54
Trim23-203ENSMUST00000069187 Mup7E9QA79 235 aa11.68□□□□□ -0.54
Trim23-203ENSMUST00000069187 Spin2fJ3QPU0 254 aa11.68□□□□□ -0.54
Trim23-203ENSMUST00000069187 Mup6P02762 180 aa11.68□□□□□ -0.54
Trim23-203ENSMUST00000069187 Mup1P11588 180 aa11.68□□□□□ -0.54
Trim23-203ENSMUST00000069187 Mup2P11589 180 aa11.68□□□□□ -0.54
Trim23-203ENSMUST00000069187 Lamp2P17047 415 aa11.68□□□□□ -0.54
Trim23-203ENSMUST00000069187 Eif3eP60229 445 aaKnown RBP11.68□□□□□ -0.54
Trim23-203ENSMUST00000069187 Runx2Q08775 607 aa11.68□□□□□ -0.54
Trim23-203ENSMUST00000069187 Fam198aQ3UY90 562 aa11.68□□□□□ -0.54
Trim23-203ENSMUST00000069187 Sh3tc2Q80VA5 1289 aa11.68□□□□□ -0.54
Trim23-203ENSMUST00000069187 Nipal4Q8BZF2 406 aa11.68□□□□□ -0.54
Trim23-203ENSMUST00000069187 Ccdc159Q8C963 411 aa11.68□□□□□ -0.54
Trim23-203ENSMUST00000069187 ThtpaQ8JZL3 224 aa11.68□□□□□ -0.54
Trim23-203ENSMUST00000069187 Gin1Q8K259 518 aa11.68□□□□□ -0.54
Trim23-203ENSMUST00000069187 Ablim1Q8K4G5 861 aa11.68□□□□□ -0.54
Trim23-203ENSMUST00000069187 Tubgcp4Q9D4F8 667 aa11.68□□□□□ -0.54
Trim23-203ENSMUST00000069187 Zscan4-ps1A0A1C7CYV3 506 aa11.68□□□□□ -0.54
Trim23-203ENSMUST00000069187 Vmn2r121A2BE32 847 aa11.68□□□□□ -0.54
Trim23-203ENSMUST00000069187 Zscan4dA7KBS4 506 aa11.68□□□□□ -0.54
Trim23-203ENSMUST00000069187 Vmn2r55G3UWZ4 781 aa11.68□□□□□ -0.54
Trim23-203ENSMUST00000069187 Vmn2r53L7N473 806 aa11.68□□□□□ -0.54
Trim23-203ENSMUST00000069187 Pik3r2O08908 722 aa11.68□□□□□ -0.54
Trim23-203ENSMUST00000069187 Cd151O35566 253 aa11.68□□□□□ -0.54
Trim23-203ENSMUST00000069187 Gsta4P24472 222 aa11.68□□□□□ -0.54
Trim23-203ENSMUST00000069187 Ugt3a1Q3UP75 523 aa11.68□□□□□ -0.54
Trim23-203ENSMUST00000069187 Zscan4fQ3URS2 506 aa11.68□□□□□ -0.54
Trim23-203ENSMUST00000069187 Hipk4Q3V016 616 aa11.68□□□□□ -0.54
Trim23-203ENSMUST00000069187 Myl6Q60605 151 aaKnown RBP11.68□□□□□ -0.54
Trim23-203ENSMUST00000069187 Tnfaip2Q61333 691 aa11.68□□□□□ -0.54
Trim23-203ENSMUST00000069187 CcnhQ61458 323 aa11.68□□□□□ -0.54
Trim23-203ENSMUST00000069187 RetsatQ64FW2 609 aa11.68□□□□□ -0.54
Trim23-203ENSMUST00000069187 Mrgprb8Q7TN51 330 aa11.68□□□□□ -0.54
Trim23-203ENSMUST00000069187 Zscan4cQ80VJ6 506 aa11.68□□□□□ -0.54
Trim23-203ENSMUST00000069187 Zfp438Q8BFX2 798 aa11.68□□□□□ -0.54
Trim23-203ENSMUST00000069187 Tmem132cQ8CEF9 1099 aa11.68□□□□□ -0.54
Trim23-203ENSMUST00000069187 Rnf208Q8K0W3 265 aa11.68□□□□□ -0.54
Trim23-203ENSMUST00000069187 Slc35c2Q8VCX2 364 aa11.68□□□□□ -0.54
Trim23-203ENSMUST00000069187 Csde1Q91W50 798 aaKnown RBP11.68□□□□□ -0.54
Trim23-203ENSMUST00000069187 Wrnip1Q91XU0 660 aa11.68□□□□□ -0.54
Trim23-203ENSMUST00000069187 Pcdha9Q91Y11 979 aa11.68□□□□□ -0.54
Trim23-203ENSMUST00000069187 Nme5Q99MH5 211 aa11.68□□□□□ -0.54
Trim23-203ENSMUST00000069187 Spock2Q9ER58 423 aa11.68□□□□□ -0.54
Trim23-203ENSMUST00000069187 Neu2Q9JMH3 379 aa11.68□□□□□ -0.54
Trim23-203ENSMUST00000069187 Mbtps1Q9WTZ2 1052 aa11.68□□□□□ -0.54
Trim23-203ENSMUST00000069187 Efcab12V9GXH0 673 aa11.68□□□□□ -0.54
Trim23-203ENSMUST00000069187 Gm10801F7C7Q0 168 aa11.68□□□□□ -0.54
Trim23-203ENSMUST00000069187 Cyp27b1O35084 507 aa11.68□□□□□ -0.54
Trim23-203ENSMUST00000069187 Mmp3P28862 477 aa11.68□□□□□ -0.54
Trim23-203ENSMUST00000069187 YwhaeP62259 255 aaKnown RBP11.68□□□□□ -0.54
Trim23-203ENSMUST00000069187 Pou6f1Q07916 301 aa11.68□□□□□ -0.54
Trim23-203ENSMUST00000069187 Patl1Q3TC46 770 aaKnown RBP11.68□□□□□ -0.54
Trim23-203ENSMUST00000069187 Tfdp2Q64163 446 aa11.68□□□□□ -0.54
Trim23-203ENSMUST00000069187 FAM120AQ6A0A9 1112 aaKnown RBP11.68□□□□□ -0.54
Trim23-203ENSMUST00000069187 Clec4b1Q7TS58 209 aa11.68□□□□□ -0.54
Trim23-203ENSMUST00000069187 Lyve1Q8BHC0 318 aa11.68□□□□□ -0.54
Trim23-203ENSMUST00000069187 Pacs1Q8K212 961 aa11.68□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 17.7 ms